BAC Information

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BAC

Clone NameB6Ng01-031B08
Chromosome12 (Build37)
Map Location 64,339,799 - 64,340,870
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031B08.bB6Ng01-031B08.g
ACCDH860797DH860798
length1,2481,057
definitionDH860797|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B08, 5' end.DH860798|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgaaaaaatatatacttaaaataaagtagttgaagaggcaaaaa
atctctgcaataaaaactaaatctctgaagtaaaaattaaagaagatact
agaagacaagctcacagattgctggaattaatactgtaaaaatattaaat
cctatcaaaagcaatttaaaaattcagtgaaatactaatcaaaatcttca
tacttcagaaattcaaagtaaattatcctaaaattaatatggatctcaaa
aaattctgaatagtcaaaataatctgagccaaagaacatacaggagggat
tattattcctgacttcaagctatattattgagcttcagtcacaaaaatgc
atggcattggcatgagaactaacatgtagaaaaatggaacaaaatagaag
acagagcatgattgcacatgactatctataaccattgaatatttggtcaa
gatgctaaaagaaaatactgaagatagcatcttcaaaatatggatgtcca
aaagtagaataaaaatgttttccatatctatcacccttcacaataacaac
tactattgtaacaaaagactacatgtaaaatatgaagtgccaaaaatgct
ataagaaaacactagtaacatgctacaaacattactgcttgaaaaggctt
tctgactaggatcccatttgatcatgaatcaaggcaatcaaatggggctt
cttaaaactaaaatgtttccatacagaaaacaaaagaatttaatgaggag
gaatctcacagaattaaagtctttgccagctgtttagttgctgttctatt
gctataatgaaacactatgacccacacatttaattaggaggttccttaaa
actcagaggattaattcctatgcattgtggtgagatgtgtggcaacacac
agtcatagagcttgaacattatctaaactaaatcctgatttgtaggcagc
agcttgggggagggggtgcctgcatagcatttttaaatctcaagctcatc
ccagtgaaacacttctcagcagtcgcagctcttatcctttccaacagttt
actagctgggagcagcattcacagagaactattctcatcaacatcaaacg
acaataattatctgattgaacatagtatccgaattacaataatcctaagg
aattgaaggtaaatactcactgaattgaaatttgcaccaggtagcttgat
gtatggaattctataacttaagaaaatgtgagtatatacagacgtctc
gaattcaggaagtggtcacgctgggacttaatgaacaagggactttcaag
ggagaggaaatcaaccacgtatttttaaggttgaaatgggaataatgaaa
cagaaaagggataaattgaggtgatttgaagatcggggtagagaaggaag
taagactaggttacaaatactaaaagactttttaaaaggcatatggaaaa
caatactaagaagctttttaaattgtcttaattgacaaaattgattttag
tatgtttatggaaggagtggtggcagagaggtacatatcttcaaaatgta
tggtataaagttctcaaaaaattaatacaaccagtgtttttaaaatgatg
tcagaagagacaaattgtttctgaatataattccactcactctgaaatat
tgcccacactggacagatgtgatttccagaaactgtatagattttgaata
ggaaagtaagagaaagtctttttaaagaaaaattaccatttagcatgtat
aaagaactcaaaaatctaaaaatagacagatcatatgactcactcacata
ttgaacttgctactatttacctaaaattctctaaagtcaacaaacaacat
ggatattttcacctcagtgttcatagtaaccatttttacaatgggtaagc
tttagagccattagtatccacaagaaaaaaaaatagcaagagaaaatgta
cttatatttccagggtaatttttttgtcagccataatgaaaattaggttt
tgtcacttgcagaaaaaatagatgcaactgtagatcatctaataaataaa
gtcaacctgagaaagacaaatgtgtccattttctctcattcatggatctt
agattttataccaatacataatgatacatgaaaagaagacttgggtgtcg
aggcagtccttaagagagtatcaaacagttaagagtgagaaacaggcagt
aaagattgtattggaagggtattatacattttattttagatttgtgcaaa
tcatttatgtcacacagtacaacccgtttgagatatgtgtaatgggtctg
acacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64339799_64340870
seq2: B6Ng01-031B08.g_66_1122 (reverse)

seq1  GAAGTTGTCAGACTCATTTACCACTATTATCTCAAAACGTGTTGTACTGT  50
      |||| |||||||| ||||    ||   |||||| ||||| ||||||||||
seq2  GAAG-TGTCAGACCCATT----ACACATATCTC-AAACGGGTTGTACTGT  44

seq1  GTGACATAAAATGATTTGCACAAATTCTAAAAATAAAATGTATAATACCC  100
      ||||||| |||||||||||||||| ||| |||||||||||||||||||||
seq2  GTGACAT-AAATGATTTGCACAAA-TCT-AAAATAAAATGTATAATACCC  91

seq1  TTCCAATTACAATCTTTTACTTGTCTGTTTCTCACTCTTAACTGTTTGAT  150
      |||||| ||||||| ||||| || ||||||||||||||||||||||||| 
seq2  TTCCAA-TACAATC-TTTAC-TGCCTGTTTCTCACTCTTAACTGTTTGA-  137

seq1  TACTCTTCTTAAGGACTGCCTCGACACCCAAGTCTTCTTTTCATGTATCA  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTC-TCTTAAGGACTGCCTCGACACCCAAGTCTTCTTTTCATGTATCA  186

seq1  TTATGTATTGGTATAAAATCTAAGATCCATGAATGAGAGAAAATGGACAA  250
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTATGTATTGGTATAAAATCTAAGATCCATGAATGAGAGAAAATGGAC-A  235

seq1  CATTTGTCTTTCTCAGGTTGACTTTATTTATTAGATGATCTACAGTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTCTTTCTCAGGTTGACTTTATTTATTAGATGATCTACAGTTGCA  285

seq1  TCTATTTTTTCTGCAAGTGACAAAACCTAATTTTCATTATGGCTGACAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTTTCTGCAAGTGACAAAACCTAATTTTCATTATGGCTGACAAA  335

seq1  AAAATTACCCTGGAAATATAAGTACATTTTCTCTTGCTATTTTTTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACCCTGGAAATATAAGTACATTTTCTCTTGCTATTTTTTTTTCT  385

seq1  TGTGGATACTAATGGCTCTAAAGCTTACCCATTGTAAAAATGGTTACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATACTAATGGCTCTAAAGCTTACCCATTGTAAAAATGGTTACTAT  435

seq1  GAACACTGAGGTGAAAATATCCATGTTGTTTGTTGACTTTAGAGAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGAGGTGAAAATATCCATGTTGTTTGTTGACTTTAGAGAATTTT  485

seq1  AGGTAAATAGTAGCAAGTTCAATATGTGAGTGAGTCATATGATCTGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAATAGTAGCAAGTTCAATATGTGAGTGAGTCATATGATCTGTCTA  535

seq1  TTTTTAGATTTTTGAGTTCTTTATACATGCTAAATGGTAATTTTTCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGATTTTTGAGTTCTTTATACATGCTAAATGGTAATTTTTCTTTA  585

seq1  AAAAGACTTTCTCTTACTTTCCTATTCAAAATCTATACAGTTTCTGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACTTTCTCTTACTTTCCTATTCAAAATCTATACAGTTTCTGGAAA  635

seq1  TCACATCTGTCCAGTGTGGGCAATATTTCAGAGTGAGTGGAATTATATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTGTCCAGTGTGGGCAATATTTCAGAGTGAGTGGAATTATATTC  685

seq1  AGAAACAATTTGTCTCTTCTGACATCATTTTAAAAACACTGGTTGTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAATTTGTCTCTTCTGACATCATTTTAAAAACACTGGTTGTATTA  735

seq1  ATTTTTTGAGAACTTTATACCATACATTTTGAAGATATGTACCTCTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGAGAACTTTATACCATACATTTTGAAGATATGTACCTCTCTGC  785

seq1  CACCACTCCTTCCATAAACATACTAAAATCAATTTTGTCAATTAAGACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTCCTTCCATAAACATACTAAAATCAATTTTGTCAATTAAGACAA  835

seq1  TTTAAAAAGCTTCTTAGTATTGTTTTCCATATGCCTTTTAAAAAGTCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGCTTCTTAGTATTGTTTTCCATATGCCTTTTAAAAAGTCTTT  885

seq1  TAGTATTTGTAACCTAGTCTTACTTCCTTCTCTACCCCGATCTTCAAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTGTAACCTAGTCTTACTTCCTTCTCTACCCCGATCTTCAAATC  935

seq1  ACCTCAATTTATCCCTTTTCTGTTTCATTATTCCCATTTCAACCTTAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAATTTATCCCTTTTCTGTTTCATTATTCCCATTTCAACCTTAAAA  985

seq1  ATACGTGGTTGATTTCCTCTCCCTTGAAAGTCCCTTGTTCATTAAGTCCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTGGTTGATTTCCTCTCCCTTGAAAGTCCCTTGTTCATTAAGTCCC  1035

seq1  AGCGTGACCACTTCCTGAATTC  1072
      ||||||||||||||||||||||
seq2  AGCGTGACCACTTCCTGAATTC  1057