BAC Information

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BAC

Clone NameB6Ng01-031K05
Chromosome12 (Build37)
Map Location 71,827,118 - 71,941,376
singlet/doubletdoublet
Overlap geneFrmd6
Upstream geneAtp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965, LOC100041061
Downstream geneActr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190, Daam1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K05.bB6Ng01-031K05.g
ACCDH861194DH861195
length916986
definitionDH861194|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K05, 5' end.DH861195|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,940,461 - 71,941,376)(71,827,118 - 71,828,116)
sequence
gaattccttaaaatatgtcaaactggccccctgaagctgactttaattta
ctatgaaaacattaacactgcattcacataggtttcgttaagcagagaat
tctcttttcattggaagaaaaccagagcaatttccggttgtggtgaagga
atatacacaaacattcctctccatgggtctcatcacttcctaaagaaatc
agatggggaaaacactggcactcttcagttaccagcttggactcactaaa
taaaggtgccacccatgtctcatgggggaggggcgctcacttatctttat
ttctctcatctcagaaagaacagtccttactatgaatgtctttgaaataa
tagattcatcaaaataagttactttgcaaattagctgtcttacatttaca
gcctaattttctttttgtctttcattcgatcttcaaaaagagattgaatc
accaaacaaattctggagtcataaagtattaacactgctgcaatgacaac
agcctaagaaatctctttggaaatttgtttttccttctttaaacattcaa
accccaccccctggttttgacagttacaggaattacatcttcatgaattt
tctcccaaagtctatgtttttatattctgattattttaaggtctgctgta
agatctcactgtatcctttttttcttttactgttttgttttgaagatgac
agggtttctctgtgtagctctagctgtcctgagactcgctatgtagacca
ggctggcctggaactcagagatcctcctgcccctgcctccaggtgctggg
attaaaggtgttcatcagtaggtacaggctgaaacttgtgagttcaaggt
taacctggcacacatagtgaattctaggccagccaggaaaacatagtgag
accctgtctcaaaaaa
gaattcaaagtctctactgtctctaatggcaaccaatgtcatcaacagac
aaatcctaaatgatgggaaatgtcattttaggataatagtattaatagtc
ttcacaattgttattaaaatatattctttcctaaaaatgtccttaactgt
gcagaatggcaacatgacttttatcacatagggttacatcaagatgaaag
caagagattatgggatccttgataaccaacagcaaaaagaaacacaggac
atcttccttatagtttaaattacttatgaagaaagcagatggctagtcac
tcttaatggttcagcattcacaactatttgggatggttgaaggatgactg
acaaagtcactgcccaggaaaatttttttatttaaatttaaaagacagag
aataataaataagacaaccataagaaaagaggcatgggggagatgcatcc
cccaaaaggttacattcaatgaaatggctgcttggggaacattgtatata
tctgaatttgctttcaatactgagctggtagggttctctctgggactatt
aggtttcaggtcaattgggaggccagaatatgtacattctccacagtaga
acaggatcggcatccaggaaactttcaggagttcacctcttgggaaacct
gggagacgttaagagggaaagcatttgaatgtggacttttgtgaattcta
cacagccacacagaatcctgctagagtgaggcaggaagggatgatttcca
acagataaactccaatctgagcatgagtcggtaggtacacaaagtaaagc
cttggccgaccctagcccacaccctcaaaggtttcaggaaccctgggaac
ccatgtgattttaggcgtgcctggagcagttggatgggtttacggatgga
tattattgaacactttctcttgaatgatgtgtctggaatagatctctttt
ttctcatttttctaaaggcatctatcatcagacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71940461_71941376
seq2: B6Ng01-031K05.b_45_960 (reverse)

seq1  TTTTTTAAGACAGGGTCTCACTATGTTTTCCTGGCTGGCCTAGAATTCAC  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGACAGGGTCTCACTATGTTTTCCTGGCTGGCCTAGAATTCAC  50

seq1  TATGTGTGCCAGGTTAACCTTGAACTCACAAGTTTCAGCCTGTACCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGCCAGGTTAACCTTGAACTCACAAGTTTCAGCCTGTACCTACT  100

seq1  GATGAACACCTTTAATCCCAGCACCTGGAGGCAGGGGCAGGAGGATCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACACCTTTAATCCCAGCACCTGGAGGCAGGGGCAGGAGGATCTCT  150

seq1  GAGTTCCAGGCCAGCCTGGTCTACATAGCGAGTCTCAGGACAGCTAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGCCAGCCTGGTCTACATAGCGAGTCTCAGGACAGCTAGAGC  200

seq1  TACACAGAGAAACCCTGTCATCTTCAAAACAAAACAGTAAAAGAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAACCCTGTCATCTTCAAAACAAAACAGTAAAAGAAAAAAA  250

seq1  GGATACAGTGAGATCTTACAGCAGACCTTAAAATAATCAGAATATAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACAGTGAGATCTTACAGCAGACCTTAAAATAATCAGAATATAAAAA  300

seq1  CATAGACTTTGGGAGAAAATTCATGAAGATGTAATTCCTGTAACTGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACTTTGGGAGAAAATTCATGAAGATGTAATTCCTGTAACTGTCAA  350

seq1  AACCAGGGGGTGGGGTTTGAATGTTTAAAGAAGGAAAAACAAATTTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGGGGTGGGGTTTGAATGTTTAAAGAAGGAAAAACAAATTTCCAA  400

seq1  AGAGATTTCTTAGGCTGTTGTCATTGCAGCAGTGTTAATACTTTATGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTCTTAGGCTGTTGTCATTGCAGCAGTGTTAATACTTTATGACT  450

seq1  CCAGAATTTGTTTGGTGATTCAATCTCTTTTTGAAGATCGAATGAAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATTTGTTTGGTGATTCAATCTCTTTTTGAAGATCGAATGAAAGAC  500

seq1  AAAAAGAAAATTAGGCTGTAAATGTAAGACAGCTAATTTGCAAAGTAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAATTAGGCTGTAAATGTAAGACAGCTAATTTGCAAAGTAACT  550

seq1  TATTTTGATGAATCTATTATTTCAAAGACATTCATAGTAAGGACTGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGATGAATCTATTATTTCAAAGACATTCATAGTAAGGACTGTTCT  600

seq1  TTCTGAGATGAGAGAAATAAAGATAAGTGAGCGCCCCTCCCCCATGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGATGAGAGAAATAAAGATAAGTGAGCGCCCCTCCCCCATGAGAC  650

seq1  ATGGGTGGCACCTTTATTTAGTGAGTCCAAGCTGGTAACTGAAGAGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGGCACCTTTATTTAGTGAGTCCAAGCTGGTAACTGAAGAGTGCC  700

seq1  AGTGTTTTCCCCATCTGATTTCTTTAGGAAGTGATGAGACCCATGGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTCCCCATCTGATTTCTTTAGGAAGTGATGAGACCCATGGAGAG  750

seq1  GAATGTTTGTGTATATTCCTTCACCACAACCGGAAATTGCTCTGGTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTGTGTATATTCCTTCACCACAACCGGAAATTGCTCTGGTTTTC  800

seq1  TTCCAATGAAAAGAGAATTCTCTGCTTAACGAAACCTATGTGAATGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATGAAAAGAGAATTCTCTGCTTAACGAAACCTATGTGAATGCAGT  850

seq1  GTTAATGTTTTCATAGTAAATTAAAGTCAGCTTCAGGGGGCCAGTTTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTTTTCATAGTAAATTAAAGTCAGCTTCAGGGGGCCAGTTTGAC  900

seq1  ATATTTTAAGGAATTC  916
      ||||||||||||||||
seq2  ATATTTTAAGGAATTC  916

seq1: chr12_71827118_71828116
seq2: B6Ng01-031K05.g_69_1054

seq1  GAATTCAAAGTCTCTACTGTCTCTAATGGCAACCAATGTCATCAACAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTCTCTACTGTCTCTAATGGCAACCAATGTCATCAACAGAC  50

seq1  AAATCCTAAATGATGGGAAATGTCATTTTAGGATAATAGTATTAATAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTAAATGATGGGAAATGTCATTTTAGGATAATAGTATTAATAGTC  100

seq1  TTCACAATTGTTATTAAAATATATTCTTTCCTAAAAATGTCCTTAACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATTGTTATTAAAATATATTCTTTCCTAAAAATGTCCTTAACTGT  150

seq1  GCAGAATGGCAACATGACTTTTATCACATAGGGTTACATCAAGATGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAATGGCAACATGACTTTTATCACATAGGGTTACATCAAGATGAAAG  200

seq1  CAAGAGATTATGGGATCCTTGATAACCAACAGCAAAAAGAAACACAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGATTATGGGATCCTTGATAACCAACAGCAAAAAGAAACACAGGAC  250

seq1  ATCTTCCTTATAGTTTAAATTACTTATGAAGAAAGCAGATGGCTAGTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTTATAGTTTAAATTACTTATGAAGAAAGCAGATGGCTAGTCAC  300

seq1  TCTTAATGGTTCAGCATTCACAACTATTTGGGATGGTTGAAGGATGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGGTTCAGCATTCACAACTATTTGGGATGGTTGAAGGATGACTG  350

seq1  ACAAAGTCACTGCCCAGGAAAATTTTTTTATTTAAATTTAAAAGACAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTCACTGCCCAGGAAAATTTTTTTATTTAAATTTAAAAGACAGAG  400

seq1  AATAATAAATAAGACAACCATAAGAAAAGAGGCATGGGGGAGATGCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAATAAGACAACCATAAGAAAAGAGGCATGGGGGAGATGCATCC  450

seq1  CCCAAAAGGTTACATTCAATGAAATGGCTGCTTGGGGAACATTGTATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGGTTACATTCAATGAAATGGCTGCTTGGGGAACATTGTATATA  500

seq1  TCTGAATTTGCTTTCAATACTGAGCTGGTAGGGTTCTCTCTGGGACTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTTGCTTTCAATACTGAGCTGGTAGGGTTCTCTCTGGGACTATT  550

seq1  AGGTTTCAGGTCAATTGGGAGGCCAGAATATGTACATTCTCCACAGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCAGGTCAATTGGGAGGCCAGAATATGTACATTCTCCACAGTAGA  600

seq1  ACAGGATCGGCATCCAGGAAACTTTCAGGAGTTCACCTCTTGGGAAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATCGGCATCCAGGAAACTTTCAGGAGTTCACCTCTTGGGAAACCT  650

seq1  GGGAGACGTTAAGAGGGAAAGCATTTGAATGTGGACTTTTGTGAATTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACGTTAAGAGGGAAAGCATTTGAATGTGGACTTTTGTGAATTCTA  700

seq1  CACAGCCACACAGAATCCTGCTAGAGTGAGGCAGGAAGGGATGATTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCACACAGAATCCTGCTAGAGTGAGGCAGGAAGGGATGATTTCCA  750

seq1  ACAGATAAACTCCAATCTGAGCATGAGTCGGTAGGTACACAAGGTAAGGC  800
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  ACAGATAAACTCCAATCTGAGCATGAGTCGGTAGGTACACAAAGTAAAGC  800

seq1  CTTGGCCGACCCTAGCCCACACCCTCAAAGGTTTCAGGAACCCTGGGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTGGCCGACCCTAGCCCACACCCTCAAAGGTTTCAGGAACCCTGGGAA-  849

seq1  CCCATGTGATTTTAGGGCGTGCCTGGAGCAGTTGGATGGGTTTACGGATG  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCATGTGATTTTA-GGCGTGCCTGGAGCAGTTGGATGGGTTTACGGATG  898

seq1  GATATTATTGAACACTTTCTCTTTGAAATGATGTGTCTGGTAATTAGATT  950
      |||||||||||||||||||||||   ||||||||||||||  | |||| |
seq2  GATATTATTGAACACTTTCTCTT--GAATGATGTGTCTGG--AATAGA-T  943

seq1  CTCTTTTTTTCTTCATTTTTCTAAAAGCCATCTATTCATCCAAGACATC  999
      |||||||||   |||||||||| |||| |||||| |||||  |||||||
seq2  CTCTTTTTT--CTCATTTTTCT-AAAGGCATCTA-TCATC--AGACATC  986