BAC Information

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BAC

Clone NameB6Ng01-032G01
Chromosome12 (Build37)
Map Location 50,672,313 - 50,866,675
singlet/doubletdoublet
Overlap genenone
Upstream geneGA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
Downstream geneLOC665071, LOC665077, LOC100039455, Prkcm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032G01.bB6Ng01-032G01.g
ACCDH861733DH861734
length848726
definitionDH861733|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G01, 5' end.DH861734|Mus musculus domesticus DNA, BAC clone: B6Ng01-032G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,672,313 - 50,673,159)(50,865,950 - 50,866,675)
sequence
gaattcctcctgctgagtgagattgaatttaattaaacagctgttgaata
cccccaaacatgcaagtgccacactgttgcaccatggtggacatcctaat
ggtccagtcattgtggttacaagctttgtacctatgtagggctatcagct
gctcccccctcttggcatcttggatagctccttttcactccatgagagct
agtcttcagggaggatgctttcaggtcaattttgtcttgattcctccaag
tactgtgctcaaagtgtatgatgtcttcagctatagaatctctttttccc
cattaattaatttatgtatttactttacatcctaatatcagcctcctctc
atcgcagtcctctctcatacagatcccttcatttcttcctccccttctac
aaggagaagggggaggtccttttgggttccaccctaccctgtcatatcaa
gtcattgtaggaccagccacatcctttcccactgaggcaagacaaggcag
cctagttagaggaaggagatccacaggcagccaacagattcagagacaac
ctgtgttccagtcagcaattggacgttagcccagactcaactgatacacc
tgaaatgcaaccgctataaataaggttcagggaaaatcacagaagataac
agaaaaattttaaggaacagaggccagggatgcctgatgacagatagtgt
cctccaaacatgaagggaaaagtcccatgaactctcttgtctctctctct
ctctgtctctctgttttctctctctctctcactctctctctctctctctc
tctctctctctctctccctctctctctctctctctctccctccctccc
gaattcatgggaaacaaaacagttggataaatatccaagtgtcatttaac
cttatgaggttcacatcctgagtgatttgattacttcagctattccacag
actcacaatgcaaataatggcgactattaaacagtctcaggaagattcat
ttttttttctagacaagtgccattagttacatgaagatcgcaaatattat
aataccctttaagaggtttaaaatgttagcaactggcaatgtacacacat
gtgttcacttgagcatttgagcagatttacaagctccagtgttttgatat
tgcaataacttctctgtctttcttttctataactattgatatttaattca
gttacaagaaaaaaggggggaaagtagaaattttcacatgaaaatttgcc
tttcaacaaagtactttttcactgagaatgattcagtggctagttttgaa
agagtctttaaaactatgaaaatacaattatgaaaatgagtttatactct
ctgataaataatacattataggttaatagttatataaccatgcttatatg
actattacattctatgcttaggaaccataaaatggaacatattatccacc
caagtttgcaaactagaccaaactgtctaatttaatttagacagaacagg
acaaaaggaagaaaaaaaggaaaatgaaatatgtaggcagatgggtaggt
aaggaagaataatgggaaggaaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_50672313_50673159
seq2: B6Ng01-032G01.b_43_890

seq1  GAATTCCTCCTGCTGAGTGAGATTGAATTTAATTAAACAGCTGTTGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGCTGAGTGAGATTGAATTTAATTAAACAGCTGTTGAATA  50

seq1  CCCCCAAACATGCAAGTGCCACACTGTTGCACCATGGTGGACATCCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAACATGCAAGTGCCACACTGTTGCACCATGGTGGACATCCTAAT  100

seq1  GGTCCAGTCATTGTGGTTACAAGCTTTGTACCTATGTAGGGCTATCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGTCATTGTGGTTACAAGCTTTGTACCTATGTAGGGCTATCAGCT  150

seq1  GCTCCCCCCTCTTGGCATCTTGGATAGCTCCTTTTCACTCCATGAGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCCCTCTTGGCATCTTGGATAGCTCCTTTTCACTCCATGAGAGCT  200

seq1  AGTCTTCAGGGAGGATGCTTTCAGGTCAATTTTGTCTTGATTCCTCCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCAGGGAGGATGCTTTCAGGTCAATTTTGTCTTGATTCCTCCAAG  250

seq1  TACTGTGCTCAAAGTGTATGATGTCTTCAGCTATAGAATCTCTTTTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGCTCAAAGTGTATGATGTCTTCAGCTATAGAATCTCTTTTTCCC  300

seq1  CATTAATTAATTTATGTATTTACTTTACATCCTAATATCAGCCTCCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTAATTTATGTATTTACTTTACATCCTAATATCAGCCTCCTCTC  350

seq1  ATCGCAGTCCTCTCTCATACAGATCCCTTCATTTCTTCCTCCCCTTCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGTCCTCTCTCATACAGATCCCTTCATTTCTTCCTCCCCTTCTAC  400

seq1  AAGGAGAAGGGGGAGGTCCTTTTGGGTTCCACCCTACCCTGTCATATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGGGGGAGGTCCTTTTGGGTTCCACCCTACCCTGTCATATCAA  450

seq1  GTCATTGTAGGACCAGCCACATCCTTTCCCACTGAGGCAAGACAAGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTAGGACCAGCCACATCCTTTCCCACTGAGGCAAGACAAGGCAG  500

seq1  CCTAGTTAGAGGAAGGAGATCCACAGGCAGCCAACAGATTCAGAGACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTAGAGGAAGGAGATCCACAGGCAGCCAACAGATTCAGAGACAAC  550

seq1  CTGTGTTCCAGTCAGCAATTGGACGTTAGCCCAGACTCAACTGATACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCCAGTCAGCAATTGGACGTTAGCCCAGACTCAACTGATACACC  600

seq1  TGAAATGCAACCGCTATAAATAAGGTTCAGGGAAAATCACAGAAGATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGCAACCGCTATAAATAAGGTTCAGGGAAAATCACAGAAGATAAC  650

seq1  AGAAAAATTTTAAGGAACAGAGGCCAGGGATGCCTGATGACAGATAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTTTAAGGAACAGAGGCCAGGGATGCCTGATGACAGATAGTGT  700

seq1  CCTCCAAACATGAAGGGAAAAGTCCCATGAACTCTCTTGTCTCTCTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAACATGAAGGGAAAAGTCCCATGAACTCTCTTGTCTCTCTCTCT  750

seq1  CTCTGTCTCTCTG-TTTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTC  799
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCTCTGTTTTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTC  800

seq1  TCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCCCTCCCTCCC  848

seq1: chr12_50865950_50866675
seq2: B6Ng01-032G01.g_67_792 (reverse)

seq1  TTCCTTCCTTCCCATTATTCTTCCTTACCTACCCATCTGCCTACATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCCATTATTCTTCCTTACCTACCCATCTGCCTACATATTT  50

seq1  CATTTTCCTTTTTTTCTTCCTTTTGTCCTGTTCTGTCTAAATTAAATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCTTTTTTTCTTCCTTTTGTCCTGTTCTGTCTAAATTAAATTAG  100

seq1  ACAGTTTGGTCTAGTTTGCAAACTTGGGTGGATAATATGTTCCATTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTGGTCTAGTTTGCAAACTTGGGTGGATAATATGTTCCATTTTAT  150

seq1  GGTTCCTAAGCATAGAATGTAATAGTCATATAAGCATGGTTATATAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTAAGCATAGAATGTAATAGTCATATAAGCATGGTTATATAACTA  200

seq1  TTAACCTATAATGTATTATTTATCAGAGAGTATAAACTCATTTTCATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTATAATGTATTATTTATCAGAGAGTATAAACTCATTTTCATAAT  250

seq1  TGTATTTTCATAGTTTTAAAGACTCTTTCAAAACTAGCCACTGAATCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTCATAGTTTTAAAGACTCTTTCAAAACTAGCCACTGAATCATT  300

seq1  CTCAGTGAAAAAGTACTTTGTTGAAAGGCAAATTTTCATGTGAAAATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGAAAAAGTACTTTGTTGAAAGGCAAATTTTCATGTGAAAATTTC  350

seq1  TACTTTCCCCCCTTTTTTCTTGTAACTGAATTAAATATCAATAGTTATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCCCCCCTTTTTTCTTGTAACTGAATTAAATATCAATAGTTATAG  400

seq1  AAAAGAAAGACAGAGAAGTTATTGCAATATCAAAACACTGGAGCTTGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGACAGAGAAGTTATTGCAATATCAAAACACTGGAGCTTGTAA  450

seq1  ATCTGCTCAAATGCTCAAGTGAACACATGTGTGTACATTGCCAGTTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTCAAATGCTCAAGTGAACACATGTGTGTACATTGCCAGTTGCTA  500

seq1  ACATTTTAAACCTCTTAAAGGGTATTATAATATTTGCGATCTTCATGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAAACCTCTTAAAGGGTATTATAATATTTGCGATCTTCATGTAA  550

seq1  CTAATGGCACTTGTCTAGAAAAAAAAATGAATCTTCCTGAGACTGTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGCACTTGTCTAGAAAAAAAAATGAATCTTCCTGAGACTGTTTAA  600

seq1  TAGTCGCCATTATTTGCATTGTGAGTCTGTGGAATAGCTGAAGTAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCGCCATTATTTGCATTGTGAGTCTGTGGAATAGCTGAAGTAATCAA  650

seq1  ATCACTCAGGATGTGAACCTCATAAGGTTAAATGACACTTGGATATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCAGGATGTGAACCTCATAAGGTTAAATGACACTTGGATATTTAT  700

seq1  CCAACTGTTTTGTTTCCCATGAATTC  726
      ||||||||||||||||||||||||||
seq2  CCAACTGTTTTGTTTCCCATGAATTC  726