BAC Information

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BAC

Clone NameB6Ng01-032J01
Chromosome12 (Build37)
Map Location 98,949,046 - 98,950,120
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628277, LOC382626, LOC100039743, LOC667732
Downstream geneLOC628351, LOC100039770, LOC667746, Galc, Gpr65, Kcnk10, Spata7, Ptpn21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032J01.bB6Ng01-032J01.g
ACCDH861862DH861863
length1,0681,156
definitionDH861862|Mus musculus domesticus DNA, BAC clone: B6Ng01-032J01, 5' end.DH861863|Mus musculus domesticus DNA, BAC clone: B6Ng01-032J01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtgtggtgatggggtcagaaatgggaacaataaattcataagc
aatgagtgagaaaagctgcaagtaggcatcagaacacagcagaaatgtaa
gtacgagttcttccttagggtcttcaggggagcaattcagtctccacact
gtgctaataaagtcctgttgtggtggtgctctatcattctaggattacaa
tatgatctgcaccccacaccccaccattaacacttttgagaccaatacat
atctgtaaatagacagcatttgagactggctgccaaccaggcaaatcaac
atggttgaataaatgtcagctatttcaagacacttgttggatagttttcc
tatttctttggtttttaatcccttggcaacaaagcactcccccgcaaaaa
aagaagggtgacacttgaaaaattctgaacatgctcaaatcaggagtcaa
aattcatattaattctacacagctacatgcttgcctgaactcaccagtat
ggggtttagagagtttttagtggatccttcaagaaacgctattaccaatc
ctcctgagggtactagcaatgactttctgtagctaaacctggagtcatgt
ctcttagtccaaggctgatttgaagatggaatcctaaatgtgagaaaatt
tagggaaatttatcttattcaaactttcattttaagtatgcatagccaag
ttgcctgattggaattcctttcttctatttctaaataaatctgaaatatg
tatgaagcaaatatttaaataataattatatatgccatagtttaactgaa
agtttttttttatagtgcctcagagaatttgctttttaactcatagactc
tgagataaatgcttcactattgcttattgctacttttagttcaaatgatt
caaacataatttagtttttcatgttcaattttttcccttagcaattaact
cctacagtttgaatgtagaaagtgacatttaaacggcttaagatgcaact
tgtttgaccaccacagcaacacgaaagttcttttgaactagatatataca
gggcatagtggcaccact
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaaaatgaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattcttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggatgatccagcaatacctctcccgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aattatggaccatctagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacactattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgttcacagtcagctaatggatggatcacagggctcccat
ggaggagctagagaagtacccaagagctaaaggtatctgcaccctatagt
gaacaacatatgactacagtaccctgagctctgactctagctgcatatgt
atcaaagaatgctagtcggcatccttgaaggaaggccattgaacaccaac
tttaattgcctatgtacaggaacgcgtgtcaaagggagaggtgtgtgtat
ggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98949046_98950120
seq2: B6Ng01-032J01.b_45_1112 (reverse)

seq1  AGTGTGTGCCACTATGCCCTGTATAATATCTACCTTTCAAAAGAACTTTC  50
      |||| ||||||||||||||||||| |||||||   |||||||||||||||
seq2  AGTG-GTGCCACTATGCCCTGTAT-ATATCTA--GTTCAAAAGAACTTTC  46

seq1  GTGTTGCTGTGGTGGTCAAACAAGTTGCATTCTTAAGCCGTTTAAATGTC  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTGTTGCTGTGGTGGTCAAACAAGTTGCA-TCTTAAGCCGTTTAAATGTC  95

seq1  ACTTTCTAACATTCAAACTGTAGGAGTTAATTGCTAAGGGAAAAAAATTG  150
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  ACTTTCT-ACATTCAAACTGTAGGAGTTAATTGCTAAGGG-AAAAAATTG  143

seq1  AACATGAAAAACTAAATTATGTTTGAATCATTTGAACTAAAAGTAGCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAAAACTAAATTATGTTTGAATCATTTGAACTAAAAGTAGCAAT  193

seq1  AAGCAATAGTGAAGCATTTATCTCAGAGTCTATGAGTTAAAAAGCAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATAGTGAAGCATTTATCTCAGAGTCTATGAGTTAAAAAGCAAATT  243

seq1  CTCTGAGGCACTATAAAAAAAAACTTTCAGTTAAACTATGGCATATATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGCACTATAAAAAAAAACTTTCAGTTAAACTATGGCATATATAA  293

seq1  TTATTATTTAAATATTTGCTTCATACATATTTCAGATTTATTTAGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTTAAATATTTGCTTCATACATATTTCAGATTTATTTAGAAATA  343

seq1  GAAGAAAGGAATTCCAATCAGGCAACTTGGCTATGCATACTTAAAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGAATTCCAATCAGGCAACTTGGCTATGCATACTTAAAATGAA  393

seq1  AGTTTGAATAAGATAAATTTCCCTAAATTTTCTCACATTTAGGATTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAATAAGATAAATTTCCCTAAATTTTCTCACATTTAGGATTCCAT  443

seq1  CTTCAAATCAGCCTTGGACTAAGAGACATGACTCCAGGTTTAGCTACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAATCAGCCTTGGACTAAGAGACATGACTCCAGGTTTAGCTACAGA  493

seq1  AAGTCATTGCTAGTACCCTCAGGAGGATTGGTAATAGCGTTTCTTGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATTGCTAGTACCCTCAGGAGGATTGGTAATAGCGTTTCTTGAAGG  543

seq1  ATCCACTAAAAACTCTCTAAACCCCATACTGGTGAGTTCAGGCAAGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTAAAAACTCTCTAAACCCCATACTGGTGAGTTCAGGCAAGCATG  593

seq1  TAGCTGTGTAGAATTAATATGAATTTTGACTCCTGATTTGAGCATGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTGTAGAATTAATATGAATTTTGACTCCTGATTTGAGCATGTTCA  643

seq1  GAATTTTTCAAGTGTCACCCTTCTTTTTTTGCGGGGGAGTGCTTTGTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTCAAGTGTCACCCTTCTTTTTTTGCGGGGGAGTGCTTTGTTGC  693

seq1  CAAGGGATTAAAAACCAAAGAAATAGGAAAACTATCCAACAAGTGTCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGATTAAAAACCAAAGAAATAGGAAAACTATCCAACAAGTGTCTTG  743

seq1  AAATAGCTGACATTTATTCAACCATGTTGATTTGCCTGGTTGGCAGCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCTGACATTTATTCAACCATGTTGATTTGCCTGGTTGGCAGCCAG  793

seq1  TCTCAAATGCTGTCTATTTACAGATATGTATTGGTCTCAAAAGTGTTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATGCTGTCTATTTACAGATATGTATTGGTCTCAAAAGTGTTAAT  843

seq1  GGTGGGGTGTGGGGTGCAGATCATATTGTAATCCTAGAATGATAGAGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTGTGGGGTGCAGATCATATTGTAATCCTAGAATGATAGAGCAC  893

seq1  CACCACAACAGGACTTTATTAGCACAGTGTGGAGACTGAATTGCTCCCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAACAGGACTTTATTAGCACAGTGTGGAGACTGAATTGCTCCCCT  943

seq1  GAAGACCCTAAGGAAGAACTCGTACTTACATTTCTGCTGTGTTCTGATGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCCTAAGGAAGAACTCGTACTTACATTTCTGCTGTGTTCTGATGC  993

seq1  CTACTTGCAGCTTTTCTCACTCATTGCTTATGAATTTATTGTTCCCATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTGCAGCTTTTCTCACTCATTGCTTATGAATTTATTGTTCCCATTT  1043

seq1  CTGACCCCATCACCACACAGAATTC  1075
      |||||||||||||||||||||||||
seq2  CTGACCCCATCACCACACAGAATTC  1068