BAC Information

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BAC

Clone NameB6Ng01-032K11
Chromosome12 (Build37)
Map Location 104,713,333 - 104,830,176
singlet/doubletdoublet
Overlap gene8430415E04Rik
Upstream geneGolga5, Chga, Itpk1, Moap1, D230037D09Rik, 5730410I19Rik, Btbd7, EG634678, Cox8c, 9030205A07Rik, LOC667269, Prima1, EG544888, Asb2, Otub2, Ddx24, D12Ertd647e, Ifi27, 1810023F06Rik
Downstream geneSerpina10, Serpina6, Gm46, Serpina1f, EG435316, Serpina1b, Serpina1d, LOC667951, LOC628801, Serpina1a, LOC667954, Serpina1c, Serpina1e, Serpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900, EG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032K11.bB6Ng01-032K11.g
ACCDH861918DH861919
length1,060863
definitionDH861918|Mus musculus domesticus DNA, BAC clone: B6Ng01-032K11, 5' end.DH861919|Mus musculus domesticus DNA, BAC clone: B6Ng01-032K11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,713,333 - 104,714,397)(104,829,314 - 104,830,176)
sequence
gaattctaattctgtcttttgtaccatagccaggctgaattgctgacacc
acagtgggacaccagtagttcctggtgatgttgtcctctagggattctgt
atcttagtaaccttgttctacagaaagtgtggtaaaattctgtcttaggc
tgggttacctattgctttgatgaaacataataactaatagaaatctaggg
aggaaagggttaactttgcttgtacttccacaccacagttcatcacatag
gaagttagcacaggctgctgtggagcagggacctcatggtgaagctgatg
tagaggctgtgggccagtgctgcttactggcttgctctttccctgtagac
ccacagtagaatgagcactggtaatcatgcaagaggatcaatatgaggct
gtcttgaaatctcctctgccagggatattagttcaaaactttccaggttt
ggccttaggaatattcttaggacaagggggaaagtgcttaccccctttgc
cacaatatcacaagaatggtctctacccagctcctaatttcattcctctt
tgaaatctcttgaactgtgtctccatcatgctcattgctctcagcacgac
tgccatccaagctcttactgcaatggcaccttaccctgactaaagcattc
aagagctttcctaggccaaagtctcaaagtcttccacgttcctctcaagt
cagccccttcaggactgtcagaacaatgaaccaggttctgacaccaaatt
ctgtatgacttactttcctatttctgtgaagaaacaccattagcaaggca
atttatggaagacagagtttattggaattatacttttcagagatgagtta
aagaccatctttgtttgggagatgcaggtagtatgcagggcacgtatgca
gttagatatgcaggatgcaaacatgcaggaaggaaaatgttaaagctcag
tattgttctgtgtcaccatacattgtacatatatggtacaacctattttc
agttgtactgcctgtttggtggggtgctggttttgtttcagtttaaggca
gcattttgca
gaattcagtgccaaaggaagccataagaggcattagattcctttgggcac
cggttactggtgactgtgcattgtgtaataaggatgctgggatagaaccc
aggtccttacttgtaagatcagtagagctcttagctgctaagccatctct
caagacccctcatgtaaatttcaaagctggctggggatgcactggctgca
tccctgcatcctgacaagtgcacagagggctggacactgacagcccaagg
gcaacaatgattttaatgtttctcacacgcttttctgctgtttcctcaca
accaccatgcagaataagatgacaaacacccagctttcttgaaagatgga
atttaccttattttcttgaacactgttttctccaccagtagacataagtt
ccaagatttctggaaggtgatttataagagcatctagaaccttttaaaga
gatatcgattgtgtttataatggtttctgtctatgttctaaattagttaa
ctccacaaatcaatttatacatagaaagaatattactgaccaaacaacat
ttttggtgttagtattattttttcctttttagaaaaaaattaatcagtgt
cacttctactcatctaaattggagaaagctaacatactcaaaactgcctt
ccaactttggaaaggagtctatatccgggtggtgtagctaagcctcccag
gctgagtcactttggtgaatagaaatatgtcaaatacagcatcagatgga
aaaattcaaaatcttcatgagtctatgtgcaagataaaatacactctcag
aacaacactgggcaccattctggaaggcttggtgattgcaggtgtgagta
aaacctgtataga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_104713333_104714397
seq2: B6Ng01-032K11.b_44_1103

seq1  GAATTCTAATTCTGTCTTTTGTACCATAGCCAGGCTGAATTGCTGACACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTCTGTCTTTTGTACCATAGCCAGGCTGAATTGCTGACACC  50

seq1  ACAGTGGGACACCAGTAGTTCCTGGTGATGTTGTCCTCTAGGGATTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGACACCAGTAGTTCCTGGTGATGTTGTCCTCTAGGGATTCTGT  100

seq1  ATCTTAGTAACCTTGTTCTACAGAAAGTGTGGTAAAATTCTGTCTTAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGTAACCTTGTTCTACAGAAAGTGTGGTAAAATTCTGTCTTAGGC  150

seq1  TGGGTTACCTATTGCTTTGATGAAACATAATAACTAATAGAAATCTAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTACCTATTGCTTTGATGAAACATAATAACTAATAGAAATCTAGGG  200

seq1  AGGAAAGGGTTAACTTTGCTTGTACTTCCACACCACAGTTCATCACATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGGTTAACTTTGCTTGTACTTCCACACCACAGTTCATCACATAG  250

seq1  GAAGTTAGCACAGGCTGCTGTGGAGCAGGGACCTCATGGTGAAGCTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTAGCACAGGCTGCTGTGGAGCAGGGACCTCATGGTGAAGCTGATG  300

seq1  TAGAGGCTGTGGGCCAGTGCTGCTTACTGGCTTGCTCTTTCCCTGTAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCTGTGGGCCAGTGCTGCTTACTGGCTTGCTCTTTCCCTGTAGAC  350

seq1  CCACAGTAGAATGAGCACTGGTAATCATGCAAGAGGATCAATATGAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTAGAATGAGCACTGGTAATCATGCAAGAGGATCAATATGAGGCT  400

seq1  GTCTTGAAATCTCCTCTGCCAGGGATATTAGTTCAAAACTTTCCAGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAATCTCCTCTGCCAGGGATATTAGTTCAAAACTTTCCAGGTTT  450

seq1  GGCCTTAGGAATATTCTTAGGACAAGGGGGAAAGTGCTTACCCCCTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTAGGAATATTCTTAGGACAAGGGGGAAAGTGCTTACCCCCTTTGC  500

seq1  CACAATATCACAAGAATGGTCTCTACCCAGCTCCTAATTTCATTCCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATATCACAAGAATGGTCTCTACCCAGCTCCTAATTTCATTCCTCTT  550

seq1  TGAAATCTCTTGAACTGTGTCTCCATCATGCTCATTGCTCTCAGCACGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTCTTGAACTGTGTCTCCATCATGCTCATTGCTCTCAGCACGAC  600

seq1  TGCCATCCAAGCTCTTACTGCAATGGCACCTTACCCTGACTAAAGCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCCAAGCTCTTACTGCAATGGCACCTTACCCTGACTAAAGCATTC  650

seq1  AAGAGCTTTCCTAGGCCAAAGTCTCAAAGTCTTCCACGTTCCTCTCAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTTCCTAGGCCAAAGTCTCAAAGTCTTCCACGTTCCTCTCAAGT  700

seq1  CAGCCCCTTCAGGACTGTCAGAACAATGAACCAGGTTCTGACACCAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTTCAGGACTGTCAGAACAATGAACCAGGTTCTGACACCAAATT  750

seq1  CTGTATGACTTACTTTCCTATTTCTGTGAAGAAACACCATTAGCAAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGACTTACTTTCCTATTTCTGTGAAGAAACACCATTAGCAAGGCA  800

seq1  ATTTATGGAAGACAGAGTTTATTGGAATTATAC-TTTCAGAGATGAGTTA  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTTATGGAAGACAGAGTTTATTGGAATTATACTTTTCAGAGATGAGTTA  850

seq1  AAGACCATC-TTGTTTGGGAGCATGCAGGTAGTATGCA-GGCACGTATGC  897
      ||||||||| ||||||||||| |||||||||||||||| |||||||||||
seq2  AAGACCATCTTTGTTTGGGAG-ATGCAGGTAGTATGCAGGGCACGTATGC  899

seq1  AGTTAGATATGCAGGATGCAAACATGCAGGAAGGAAAAATGTTAAAGCTC  947
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTTAGATATGCAGGATGCAAACATGCAGGAAGG-AAAATGTTAAAGCTC  948

seq1  AAGTATTGTTCTGTGTCAACCATACATTGTACATATATGGTACAAACCTA  997
       |||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  -AGTATTGTTCTGTGTC-ACCATACATTGTACATATATGGTAC-AACCTA  995

seq1  TTTTCCAGTTGTTACTGTCTGTTTGGTTGTGGTGCTTGTTTTGTTTCAGT  1047
      |||| |||||| ||||| |||||||| || |||||| |||||||||||||
seq2  TTTT-CAGTTG-TACTGCCTGTTTGG-TGGGGTGCTGGTTTTGTTTCAGT  1042

seq1  TTTAGGCAGCATTTTGCA  1065
      || |||||||||||||||
seq2  TTAAGGCAGCATTTTGCA  1060

seq1: chr12_104829314_104830176
seq2: B6Ng01-032K11.g_68_930 (reverse)

seq1  TCTATTACAGGTTTTACTCACACCTGCAATCACAAAGCCTTCCAGAATGG  50
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTA-TACAGGTTTTACTCACACCTGCAATCACCAAGCCTTCCAGAATGG  49

seq1  TGCCCAGTGTTGTTCTGAGAGTGTATTTTATCTTGCACATAGACTCATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGTGTTGTTCTGAGAGTGTATTTTATCTTGCACATAGACTCATGA  99

seq1  AGATTTTGAAATTTTTCCATCTGATGCTGTATTTGACATA-TTCTATTCA  149
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  AGATTTTG-AATTTTTCCATCTGATGCTGTATTTGACATATTTCTATTCA  148

seq1  CCAAAGTGACTCAGCCTGGGAGGCTTAGCTACACCA-CCGGATATAGACT  198
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAAAGTGACTCAGCCTGGGAGGCTTAGCTACACCACCCGGATATAGACT  198

seq1  CCTTTCCAAAGTTGGAAGGCAGTTTTGAGTATGTTAGCTTTCTCCAATTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCAAAGTTGGAAGGCAGTTTTGAGTATGTTAGCTTTCTCCAATTT  248

seq1  AGATGAGTAGAAGTGACACTGATTAATTTTTTTCTAAAAAGGAAAAAATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGTAGAAGTGACACTGATTAATTTTTTTCTAAAAAGGAAAAAATA  298

seq1  ATACTAACACCAAAAATGTTGTTTGGTCAGTAATATTCTTTCTATGTATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAACACCAAAAATGTTGTTTGGTCAGTAATATTCTTTCTATGTATA  348

seq1  AATTGATTTGTGGAGTTAACTAATTTAGAACATAGACAGAAACCATTATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATTTGTGGAGTTAACTAATTTAGAACATAGACAGAAACCATTATA  398

seq1  AACACAATCGATATCTCTTTAAAAGGTTCTAGATGCTCTTATAAATCACC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAATCGATATCTCTTTAAAAGGTTCTAGATGCTCTTATAAATCACC  448

seq1  TTCCAGAAATCTTGGAACTTATGTCTACTGGTGGAGAAAACAGTGTTCAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAATCTTGGAACTTATGTCTACTGGTGGAGAAAACAGTGTTCAA  498

seq1  GAAAATAAGGTAAATTCCATCTTTCAAGAAAGCTGGGTGTTTGTCATCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAGGTAAATTCCATCTTTCAAGAAAGCTGGGTGTTTGTCATCTT  548

seq1  ATTCTGCATGGTGGTTGTGAGGAAACAGCAGAAAAGCGTGTGAGAAACAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCATGGTGGTTGTGAGGAAACAGCAGAAAAGCGTGTGAGAAACAT  598

seq1  TAAAATCATTGTTGCCCTTGGGCTGTCAGTGTCCAGCCCTCTGTGCACTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATTGTTGCCCTTGGGCTGTCAGTGTCCAGCCCTCTGTGCACTT  648

seq1  GTCAGGATGCAGGGATGCAGCCAGTGCATCCCCAGCCAGCTTTGAAATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGATGCAGGGATGCAGCCAGTGCATCCCCAGCCAGCTTTGAAATTT  698

seq1  ACATGAGGGGTCTTGAGAGATGGCTTAGCAGCTAAGAGCTCTACTGATCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGGGGTCTTGAGAGATGGCTTAGCAGCTAAGAGCTCTACTGATCT  748

seq1  TACAAGTAAGGACCTGGGTTCTATCCCAGCATCCTTATTACACAATGCAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTAAGGACCTGGGTTCTATCCCAGCATCCTTATTACACAATGCAC  798

seq1  AGTCACCAGTAACCGGTGCCCAAAGGAATCTAATGCCTCTTATGGCTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCAGTAACCGGTGCCCAAAGGAATCTAATGCCTCTTATGGCTTCC  848

seq1  TTTGGCACTGAATTC  863
      |||||||||||||||
seq2  TTTGGCACTGAATTC  863