BAC Information

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BAC

Clone NameB6Ng01-033P13
Chromosome12 (Build37)
Map Location 39,870,002 - 39,871,132
singlet/doubletsinglet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033P13.bB6Ng01-033P13.g
ACCDH862868DH862869
length1,118288
definitionDH862868|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P13, 5' end.DH862869|Mus musculus domesticus DNA, BAC clone: B6Ng01-033P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaaaaattgtggtaaggatgctgaattatagttctctagaatc
aatggcctctggtagggatgccggtagaagattgttttcttaaggagtta
gccaccaggactttgaccaagctttaggaagtttatgggcagcaccaatt
ggaattctgtttcatttttatttttctttttgtttgaggggacccatgtg
tgggggagaagacctgagaggactgaaaagtgagggtgctcagggttcat
catgtgaaattcccaagtaatcaataaaaatattatacaaatatatgtaa
ataaagttaaaagtttaaatataagttccatcaatagcatggttgccttt
ttccataaattagtaaggatcaattacagatggatttattaattactcaa
aacgatccatataataagtaaatatgtttacagtaagtatgcatgtttat
agatgaggaaatttatggtcacaaagtttacttgcatttgtccactgtca
cacaaatactctgaaaaatacctagttaactaggtggatctttactaagt
atggtagcttacagtacacacaaatcatttcaactaattaccatacttca
aatcacatcaaagaaacattagtctttcatatttctttttttttccattt
tttattattctttaaagcatcttcgacttgccggtgatgtctataggtac
tacagctatagttatcctccacctgtgaacattctagtgacaggaagttt
tcctttctttcaaatggtagttgcatggatggttctggaaatgggttctc
ttagcatcatacctgggacatgatttatactagcagtagaattgcttcct
gtgtttgcattgagtagaataaaatgttaattctcttacatcatgttagt
gttttaggagggttaataagaaagatctattggtgttatagccactgcta
atcacatgaatttattatctatgataaaactacattaaacttgatatctc
ggagatagccctttgttatttttctcgcaaataatgacaaaaaaaaaaaa
atccaaaagaaaaaggtcctgataacaatgagggaagtagaaaatctcat
ctagttgctgaccaccat

tttgtttaactctgagccccattttttaatgggcttatttgatattctgg
agtccaccttcttgatatatatatatatatatatatatatatatatatat
atatatatatatatatgaatatatatatatatatatatataaaaaaatat
aaaaaaaaataaaaatataaaaatatatttgagagaatatagagagggtg
tttggccttacagaagctctgcgattttaggaggggcgagttggtgtttc
ttggtcttacagcaaaagccagtgctgttctattcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39870002_39871132
seq2: B6Ng01-033P13.b_46_1163

seq1  GAATTCTTAAAAATTGTGGTAAGGATGCTGAATTATAGTTCTCTAGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAAATTGTGGTAAGGATGCTGAATTATAGTTCTCTAGAATC  50

seq1  AATGGCCTCTGGTAGGGATGCCGGTAGAAGATTGTTTTCTTAAGGAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCTCTGGTAGGGATGCCGGTAGAAGATTGTTTTCTTAAGGAGTTA  100

seq1  GCCACCAGGACTTTGACCAAGCTTTAGGAAGTTTATGGGCAGCACCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCAGGACTTTGACCAAGCTTTAGGAAGTTTATGGGCAGCACCAATT  150

seq1  GGAATTCTGTTTCATTTTTATTTTTCTTTTTGTTTGAGGGGACCCATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTGTTTCATTTTTATTTTTCTTTTTGTTTGAGGGGACCCATGTG  200

seq1  TGGGGGAGAAGACCTGAGAGGACTGAAAAGTGAGGGTGCTCAGGGTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGAAGACCTGAGAGGACTGAAAAGTGAGGGTGCTCAGGGTTCAT  250

seq1  CATGTGAAATTCCCAAGTAATCAATAAAAATATTATACAAATATATGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAATTCCCAAGTAATCAATAAAAATATTATACAAATATATGTAA  300

seq1  ATAAAGTTAAAAGTTTAAATATAAGTTCCATCAATAGCATGGTTGCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTAAAAGTTTAAATATAAGTTCCATCAATAGCATGGTTGCCTTT  350

seq1  TTCCATAAATTAGTAAGGATCAATTACAGATGGATTTATTAATTACTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAAATTAGTAAGGATCAATTACAGATGGATTTATTAATTACTCAA  400

seq1  AACGATCCATATAATAAGTAAATATGTTTACAGTAAGTATGCATGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATCCATATAATAAGTAAATATGTTTACAGTAAGTATGCATGTTTAT  450

seq1  AGATGAGGAAATTTATGGTCACAAAGTTTACTTGCATTTGTCCACTGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGAAATTTATGGTCACAAAGTTTACTTGCATTTGTCCACTGTCA  500

seq1  CACAAATACTCTGAAAAATACCTAGTTAACTAGGTGGATCTTTACTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATACTCTGAAAAATACCTAGTTAACTAGGTGGATCTTTACTAAGT  550

seq1  ATGGTAGCTTACAGTACACACAAATCATTTCAACTAATTACCATACTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGCTTACAGTACACACAAATCATTTCAACTAATTACCATACTTCA  600

seq1  AATCACATCAAAGAAACATTAGTCTTTCATATTTCTTTTTTTTTCCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACATCAAAGAAACATTAGTCTTTCATATTTCTTTTTTTTTCCATTT  650

seq1  TTTATTATTCTTTAAAGCATCTTCGACTTGCCGGTGATGTCTATAGGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTCTTTAAAGCATCTTCGACTTGCCGGTGATGTCTATAGGTAC  700

seq1  TACAGCTATAGTTATCCTCCACCTGTGAACATTCTAGTGACAGGAAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTATAGTTATCCTCCACCTGTGAACATTCTAGTGACAGGAAGTTT  750

seq1  TCCTTTCTTTCAAATGGTAGTTGCATGGATGGTTCTGGAAATGGGTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTTTCAAATGGTAGTTGCATGGATGGTTCTGGAAATGGGTTCTC  800

seq1  TTAGCATCATACCTGGGACATGATTTATACTAGCAGTAGAATTGCTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATCATACCTGGGACATGATTTATACTAGCAGTAGAATTGCTTCCT  850

seq1  GTGTTTGCATTGAGTAGAATAAAATGTTAATTCTCTTACATCATGGTTAG  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGTTTGCATTGAGTAGAATAAAATGTTAATTCTCTTACATCAT-GTTAG  899

seq1  TGTTTTTAGGAGGGTTAATAAGAAAGATCTATTGGTGTTATAGCCACTGC  950
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TG-TTTTAGGAGGGTTAATAAGAAAGATCTATTGGTGTTATAGCCACTGC  948

seq1  TAATCACATGAATTTATTATCTAGTATAAAACTACATTAAACATGATATC  1000
      |||||||||||||||||||||||  ||||||||||||||||| |||||||
seq2  TAATCACATGAATTTATTATCTATGATAAAACTACATTAAACTTGATATC  998

seq1  T-GGAGATAGCACTTTGTTAATTTTTCTTCAGCAAAATAATGACAAAAAA  1049
      | ||||||||| ||||||| ||||||||   || |||||||||| |||||
seq2  TCGGAGATAGCCCTTTGTT-ATTTTTCT--CGC-AAATAATGAC-AAAAA  1043

seq1  AAAAAAAATCCAAGAAGAAAAAGGGGCAAAGAAGACAAGGAGGGGAGTGA  1099
      ||||||||||||| ||||||||||  |   ||  |||| ||||| ||| |
seq2  AAAAAAAATCCAA-AAGAAAAAGGTCC--TGATAACAATGAGGGAAGT-A  1089

seq1  GATGAAGCTAATCATAGTTTGCTGACCACCAT  1131
      ||  || || ||| ||| ||||||||||||||
seq2  GA-AAATCTCATC-TAG-TTGCTGACCACCAT  1118


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