BAC Information

Click to search

BAC

Clone NameB6Ng01-034B12
Chromosome12 (Build37)
Map Location 59,749,534 - 59,860,252
singlet/doubletdoublet
Overlap genenone
Upstream geneBC042761, Sstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639, LOC665644
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034B12.bB6Ng01-034B12.g
ACCDH862954DH862955
length9781,103
definitionDH862954|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B12, 5' end.DH862955|Mus musculus domesticus DNA, BAC clone: B6Ng01-034B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,749,534 - 59,750,530)(59,859,146 - 59,860,252)
sequence
gaattcattggttaattaaacagggagaaaaggaggtgtcatccaggaaa
ggcttcataaacaaaacaaatgagaagagagggcagcggaagcacaaggg
acagagtcaaagaattacccaggtgtgaaaacagaagcccataaaactcc
gagtggctgcagtctagacgctattcagagatacaggaatggatctgact
ggaaaagtagtttgtacaaacagacagatgaccttcagtgtcgctttgaa
gtgagaaatgaagtgtgaatttaaaaggctttgagagagcttgctagctc
ttgctaagaaaaatcaatttaacttttccctgccctaaactttccctaac
aggagtaccagtgctcaacagaggctctaaagacagaagaatacaagcaa
aactgggctcatctaccatatttctcagtgagcttgtgttccatgaaacc
ctgtgttaataaatatatcatgatagaataacttggggaagggggataac
atttgaaatgtgaataaataaaataaccaataaaaataaaaatatttaaa
aaataaaatataatagtaactttgggttactaaattcatcatatcactct
cctaaatagcctttcactaggttaattcatatgaaagagaatacatcatt
taacattgctctagaccacccatacccggcaggattgtgtagagctgtga
ttctcttcctaacacttcagcctttaatacagttgcttatgttttggtga
ccccaatcataaaattactttgttgctacttaataactgtaattttgcta
ctgtatgaattgtagtgtatctgatatacaggatatcttatatgatggct
agaaagcatcattttacctctctcccccaagggttgcatcacaggtgaga
cagctttatctacaggactgtagtgttttcagactcagtcttagtcagta
tttagaaggatcgacatcagatttgtaa
gaattcagtttgtagaccaggctggcctcgaactcagaaatctgcctgcc
tctgcctcccaagtcctgggattaaaggtgtgcgccaccaatttctgtgt
gtgttctaaacaagtaaatgaagatgtgaacattggtaatgacttgagtt
tacttgtgccaactcagaaccagcacgtctgattttcctcttcagttctt
ccccttccgtcagtgtggctgaacaacagtgagtggtttccttttcaagt
gagacaacttctgagatcttctcagactattgacttcagagcacagaaga
tgcagcccagtgaactaggtggagcttaggagcatttcccagggatacag
gcaggtgcttccttttcttcaaataagagatgattttacctctgcccctt
ccaggagctaattcacagttataaagttactttcagttttcagaaaatgt
ctgtctgcaactcaaatgttttataagctgttgggaagtgacagataaaa
tagatttttctgggacaaaattgcattttatgaaggtgatacaccttata
ctatgggatttcttgagattgatggttttgagtttttgcaccaggcagca
tggatccatttgcaaaaggcagttctaaatcttctctggattcccccttt
aaatctcagcactgcctttgcaattcccctgactacaagcatcaatgtcc
tctgttaccttggggcttgtacatgacaaatctttttcatggttatgact
tctatattttttaggatctctggaagatgtttcccatcagtagacagggt
cttaggtatcttctatgtccccatccctaagagctgtcatttcctcttct
gaaagaagtggaaatcagccatataatgatatagaaatattttctctttc
tagtctgtattcaccttctctaatactttaaaagcgtgttgtttaaggtt
attaggatacattttacacagataaacacaaaggagtacccttaaattaa
ctgatgggaatgttgtgttttggtcctcaggtactttcatgatgcgatgc
cagggttggggtgttaggtttatgaggatatcactggtaagaatatggaa
gag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59749534_59750530
seq2: B6Ng01-034B12.b_48_1025

seq1  GAATTCATTGGTTAATTAAACAGGGAGAAAAGGAGGTGTCATCCAGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGTTAATTAAACAGGGAGAAAAGGAGGTGTCATCCAGGAAA  50

seq1  GGCTTCATAAACAAAACAAATGAGAAGAGAGGGCAGCGGAAGCACAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCATAAACAAAACAAATGAGAAGAGAGGGCAGCGGAAGCACAAGGG  100

seq1  ACAGAGTCAAAGAATTACCCAGGTGTGAAAACAGAAGCCCATAAAACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTCAAAGAATTACCCAGGTGTGAAAACAGAAGCCCATAAAACTCC  150

seq1  GAGTGGCTGCAGTCTAGACGCTATTCAGAGATACAGGAATGGATCTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCTGCAGTCTAGACGCTATTCAGAGATACAGGAATGGATCTGACT  200

seq1  GGAAAAGTAGTTTGTACAAACAGACAGATGACCTTCAGTGTCGCTTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGTAGTTTGTACAAACAGACAGATGACCTTCAGTGTCGCTTTGAA  250

seq1  GTGAGAAATGAAGTGTGAATTTAAAAGGCTTTGAGAGAGCTTGCTAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAATGAAGTGTGAATTTAAAAGGCTTTGAGAGAGCTTGCTAGCTC  300

seq1  TTGCTAAGAAAAATCAATTTAACTTTTCCCTGCCCTAAACTTTCCCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAAGAAAAATCAATTTAACTTTTCCCTGCCCTAAACTTTCCCTAAC  350

seq1  AGGAGTACCAGTGCTCAACAGAGGCTCTAAAGACAGAAGAATACAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACCAGTGCTCAACAGAGGCTCTAAAGACAGAAGAATACAAGCAA  400

seq1  AACTGGGCTCATCTACCATATTTCTCAGTGAGCTTGTGTTCCATGAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGCTCATCTACCATATTTCTCAGTGAGCTTGTGTTCCATGAAACC  450

seq1  CTGTGTTAATAAATATATCATGATAGAATAACTTGGGGAAGGGGGATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTAATAAATATATCATGATAGAATAACTTGGGGAAGGGGGATAAC  500

seq1  ATTTGAAATGTGAATAAATAAAATAACCAATAAAAATAAAAATATTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAATGTGAATAAATAAAATAACCAATAAAAATAAAAATATTTAAA  550

seq1  AAATAAAATATAATAGTAACTTTGGGTTACTAAATTCATCATATCACTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATATAATAGTAACTTTGGGTTACTAAATTCATCATATCACTCT  600

seq1  CCTAAATAGCCTTTCACTAGGTTAATTCATATGAAAGAGAATACATCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATAGCCTTTCACTAGGTTAATTCATATGAAAGAGAATACATCATT  650

seq1  TAACATTGCTCTAGACCACCCATACCCGGCAGGATTGTGTAGAGCTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTGCTCTAGACCACCCATACCCGGCAGGATTGTGTAGAGCTGTGA  700

seq1  TTCTCTTCCTAACACTTCAGCCTTTAATACAGTTGCTTATGTTTTGGTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCCTAACACTTCAGCCTTTAATACAGTTGCTTATGTTTTGGTGA  750

seq1  CCCCAATCATAAAATTACTTTTGTTGCTACTTAATAACTGTAATTTTGCT  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCCAATCATAAAATTAC-TTTGTTGCTACTTAATAACTGTAATTTTGCT  799

seq1  ACTGTTATGAATTGTAGTGTATCTGATATACAGGATATCTTATATTGAAT  850
      |||| ||||||||||||||||||||||||||||||||||||||||   ||
seq2  ACTG-TATGAATTGTAGTGTATCTGATATACAGGATATCTTATAT--GAT  846

seq1  GGCTAAGAAAGCATCATTTTACCCCCCCCCCCAAGGGGTTGCCATCAACA  900
      |||| |||||||||||||||||| | | |||| | |||||| |||| |||
seq2  GGCT-AGAAAGCATCATTTTACCTCTCTCCCCCAAGGGTTG-CATC-ACA  893

seq1  GGTTGAGAACAGCTTTATCTACAGGAACTGTAAGTGTTTTTCAGACTTCA  950
      || |||| ||||||||||||||||| ||||| |||| ||||||||| |||
seq2  GG-TGAG-ACAGCTTTATCTACAGG-ACTGT-AGTG-TTTTCAGAC-TCA  937

seq1  GTCTTTAGTTCAGTATTTAGAAAGGGATCGACACCAGGGATTTGTAA  997
      ||| |||| |||||||||||||  ||||||||| ||  |||||||||
seq2  GTC-TTAG-TCAGTATTTAGAA--GGATCGACATCA--GATTTGTAA  978

seq1: chr12_59859146_59860252
seq2: B6Ng01-034B12.g_69_1171 (reverse)

seq1  CTCTTCCATCTTCTTTACCA-TGTTATCCTCAT-AACCTACTACTCCCAC  48
      ||||||||| ||| |||||| || ||||||||| ||||||  || || ||
seq2  CTCTTCCATATTC-TTACCAGTGATATCCTCATAAACCTAACACCCCAAC  49

seq1  CCTGGCATCGCATCATGAAAGTACCTGA-GACCAAGACACAACATTCCCA  97
      |||||||||||||||||||||||||||| |||||| ||||||||||||||
seq2  CCTGGCATCGCATCATGAAAGTACCTGAGGACCAAAACACAACATTCCCA  99

seq1  TCAGTTAAATTTAAGGGTTACTTCTTTGTGTTTTATCTGTGTAAAATGTA  147
      |||||| |||||||||| |||| ||||||| |||||||||||||||||||
seq2  TCAGTT-AATTTAAGGG-TACTCCTTTGTG-TTTATCTGTGTAAAATGTA  146

seq1  TCCTATAACCCTTAAACAACACGCTTTTAAAGTATTAGAAGAAGGTGAAT  197
      |||||  | ||||||||||||||||||||||||||||| |||||||||||
seq2  TCCTAATAACCTTAAACAACACGCTTTTAAAGTATTAG-AGAAGGTGAAT  195

seq1  ACAAGACTAGAAAGAGAAAATATTTCTATATCATTATATGGCCTGATTTC  247
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AC-AGACTAGAAAGAGAAAATATTTCTATATCATTATATGG-CTGATTTC  243

seq1  CACTTCTTTCAGAAGAGGAAATGACAGCTCTTAGGGATGGGGACATAGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTTCAGAAGAGGAAATGACAGCTCTTAGGGATGGGGACATAGAA  293

seq1  GATACCTAAGACCCTGTCTACTGATGGGAAACATCTTCCAGAGATCCTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCTAAGACCCTGTCTACTGATGGGAAACATCTTCCAGAGATCCTAA  343

seq1  AAAATATAGAAGTCATAACCATGAAAAAGATTTGTCATGTACAAGCCCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAGAAGTCATAACCATGAAAAAGATTTGTCATGTACAAGCCCCA  393

seq1  AGGTAACAGAGGACATTGATGCTTGTAGTCAGGGGAATTGCAAAGGCAGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACAGAGGACATTGATGCTTGTAGTCAGGGGAATTGCAAAGGCAGT  443

seq1  GCTGAGATTTAAAGGGGGAATCCAGAGAAGATTTAGAACTGCCTTTTGCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATTTAAAGGGGGAATCCAGAGAAGATTTAGAACTGCCTTTTGCA  493

seq1  AATGGATCCATGCTGCCTGGTGCAAAAACTCAAAACCATCAATCTCAAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATCCATGCTGCCTGGTGCAAAAACTCAAAACCATCAATCTCAAGA  543

seq1  AATCCCATAGTATAAGGTGTATCACCTTCATAAAATGCAATTTTGTCCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCATAGTATAAGGTGTATCACCTTCATAAAATGCAATTTTGTCCCA  593

seq1  GAAAAATCTATTTTATCTGTCACTTCCCAACAGCTTATAAAACATTTGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCTATTTTATCTGTCACTTCCCAACAGCTTATAAAACATTTGAG  643

seq1  TTGCAGACAGACATTTTCTGAAAACTGAAAGTAACTTTATAACTGTGAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACAGACATTTTCTGAAAACTGAAAGTAACTTTATAACTGTGAAT  693

seq1  TAGCTCCTGGAAGGGGCAGAGGTAAAATCATCTCTTATTTGAAGAAAAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCTGGAAGGGGCAGAGGTAAAATCATCTCTTATTTGAAGAAAAGG  743

seq1  AAGCACCTGCCTGTATCCCTGGGAAATGCTCCTAAGCTCCACCTAGTTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTGCCTGTATCCCTGGGAAATGCTCCTAAGCTCCACCTAGTTCA  793

seq1  CTGGGCTGCATCTTCTGTGCTCTGAAGTCAATAGTCTGAGAAGATCTCAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGCATCTTCTGTGCTCTGAAGTCAATAGTCTGAGAAGATCTCAG  843

seq1  AAGTTGTCTCACTTGAAAAGGAAACCACTCACTGTTGTTCAGCCACACTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTCTCACTTGAAAAGGAAACCACTCACTGTTGTTCAGCCACACTG  893

seq1  ACGGAAGGGGAAGAACTGAAGAGGAAAATCAGACGTGCTGGTTCTGAGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAGGGGAAGAACTGAAGAGGAAAATCAGACGTGCTGGTTCTGAGTT  943

seq1  GGCACAAGTAAACTCAAGTCATTACCAATGTTCACATCTTCATTTACTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAGTAAACTCAAGTCATTACCAATGTTCACATCTTCATTTACTTG  993

seq1  TTTAGAACACACACAGAAATTGGTGGCGCACACCTTTAATCCCAGGACTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAACACACACAGAAATTGGTGGCGCACACCTTTAATCCCAGGACTT  1043

seq1  GGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA  1093

seq1  AACTGAATTC  1107
      ||||||||||
seq2  AACTGAATTC  1103