BAC Information

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BAC

Clone NameB6Ng01-034E06
Chromosome12 (Build37)
Map Location 48,219,606 - 48,220,439
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664952, Nova1
Downstream geneLOC100039190, EG664891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034E06.bB6Ng01-034E06.g
ACCDH863068DH863069
length828662
definitionDH863068|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E06, 5' end.DH863069|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcattatttctagaaaaatactaccacaccatctagaacatat
gctctctctgtacttgtcagattgctttcacaattctacgacagttaggt
actgttagaataggatttgggaactttccaaagcctactccagaatgatc
tttcccccaagctacccttctcactctttttttcaattttttattagata
ttttcttcatttacatttcaaatgctattccaaaagtcccctataccctc
cccccaccctgcttccctacccaccaactcctacttctggccctggcatt
cccctctactggggcatataaagtttgcaagaccaaggggcctctcttcc
taatgatggccaactaggccatcttctgctttatatgcagctagtgacac
gagctctgggggtactggttagttcatattgttgttcctcctatagggtt
gcagacaactttggctccttgggtactttctcagctcctcactttggggg
cccctcactgttttctttagtcatacttataacctgccattaaaagtgtt
gaaaactaaggatattaaaaataatgatttttttgtgtatcacttggtgt
tgctttattttgtaaaaaagaaaagaaagaaagaaaaatagggttcagtt
tgtagagctcctgcatagcatgtgggggggggggctctagatttaatcta
tgaaataaaaaaggggtgttagccaatgaaatacctgtatttctatcctc
tgatgaaacaattttatatactttattttacctgttttcaagagataaag
gttactggcccttgctgaatacccacct

gaattcatggaaatgtttaattcctttattctttcttgtgccaatagtta
ttcaggagagagttattccatttccatgactttgtaggcttttggttgtt
tgtgttgttattgttgaaatccagatttaatcaatagttttcagataaga
tacagggattattttaattttcttgtatgttttgagaccttatgagtgag
tatgtggtctattttggagcatattccttgaggtgctgagaaaaaggtat
attcttttgggtttgggtgaaatgtactatagatatttgttaagtccatt
agagccataatatctgttacttccaatatttctgtttagtttctgtctgg
atgaccttaccattggtgagaatggggtgatgaagtcttctactattaat
atatgagattaaatgtgtgatttatgctttagtaatgtttctcttatgaa
tgtgggtgcccttgcatttgggacagagttgttcacaactgaagtgtcat
ctttaatagatgttttctctgataagtatgaagtaattcaattccccatc
tcttttgattaataatggttgttaagtctattctgttaaatattacaaaa
ggctttcactagtttgcttcctgggtccatttacttagaaagtctttttt
atcacttaaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_48219606_48220439
seq2: B6Ng01-034E06.b_42_869

seq1  GAATTCTTCATTATTTCTAGAAAAATACTACCACACCATCTAGAACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTATTTCTAGAAAAATACTACCACACCATCTAGAACATAT  50

seq1  GCTCTCTCTGTACTTGTCAGATTGCTTTCACAATTCTACGACAGTTAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCTGTACTTGTCAGATTGCTTTCACAATTCTACGACAGTTAGGT  100

seq1  ACTGTTAGAATAGGATTTGGGAACTTTCCAAAGCCTACTCCAGAATGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGAATAGGATTTGGGAACTTTCCAAAGCCTACTCCAGAATGATC  150

seq1  TTTCCCCCAAGCTACCCTTCTCACTCTTTTTTTCAATTTTTTATTAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCAAGCTACCCTTCTCACTCTTTTTTTCAATTTTTTATTAGATA  200

seq1  TTTTCTTCATTTACATTTCAAATGCTATTCCAAAAGTCCCCTATACCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCATTTACATTTCAAATGCTATTCCAAAAGTCCCCTATACCCTC  250

seq1  CCCCCACCCTGCTTCCCTACCCACCAACTCCTACTTCTGGCCCTGGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCTGCTTCCCTACCCACCAACTCCTACTTCTGGCCCTGGCATT  300

seq1  CCCCTCTACTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTACTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCC  350

seq1  TAATGATGGCCAACTAGGCCATCTTCTGCTTTATATGCAGCTAGTGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGGCCAACTAGGCCATCTTCTGCTTTATATGCAGCTAGTGACAC  400

seq1  GAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCTCCTATAGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCTCCTATAGGGTT  450

seq1  GCAGACAACTTTGGCTCCTTGGGTACTTTCTCAGCTCCTCACTTTGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAACTTTGGCTCCTTGGGTACTTTCTCAGCTCCTCACTTTGGGGG  500

seq1  CCCCTCACTGTTTTCTTTAGTCATACTTATAACCTGCCATTAAAAGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCACTGTTTTCTTTAGTCATACTTATAACCTGCCATTAAAAGTGTT  550

seq1  GAAAACTAAGGATATTAAAAATAATGATTTTTTTGTGTATCACTTGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAAGGATATTAAAAATAATGATTTTTTTGTGTATCACTTGGTGT  600

seq1  TGCTTTATTTTGTAAAAAAGAAAAGAAAGAAAGAAAAATAGGGTTCAG-T  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGCTTTATTTTGTAAAAAAGAAAAGAAAGAAAGAAAAATAGGGTTCAGTT  650

seq1  TGTAGAGCTCCTGCATAGCATGTGGGGGGGGGGGCTCTAGATTTAATCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  TGTAGAGCTCCTGCATAGCATGTGGGGGGGGGGGCTCTAGATTTAAT-CT  699

seq1  ATGTAATAAAAAAGGGGTGTTAGCCAAATGAAATACCTGTATATCTATCC  749
      ||| ||||||||||||||||||||| |||||||||||||||| |||||||
seq2  ATGAAATAAAAAAGGGGTGTTAGCC-AATGAAATACCTGTATTTCTATCC  748

seq1  TCTGATGAAACAAATTTATCATAACATTATTTTAGCTGTATTTCAAAGAG  799
      ||||||||||||| ||||| || || |||||||| |||| |||| |||||
seq2  TCTGATGAAACAATTTTAT-AT-ACTTTATTTTACCTGT-TTTC-AAGAG  794

seq1  ATAAATGTTACTGGCCCTTGCTGAAATACCCACCT  834
      ||||| ||||||||||||||||| |||||||||||
seq2  ATAAAGGTTACTGGCCCTTGCTG-AATACCCACCT  828


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