BAC Information

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BAC

Clone NameB6Ng01-034F03
Chromosome12 (Build37)19 (Build37)
Map Location 69,054,884 - 69,055,49320,822,792 - 20,823,502
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneMdga2, LOC100040745
Downstream geneLOC100040681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034F03.bB6Ng01-034F03.g
ACCDH863110DH863111
length610712
definitionDH863110|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F03, 5' end.DH863111|Mus musculus domesticus DNA, BAC clone: B6Ng01-034F03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(69,054,884 - 69,055,493)(20,822,792 - 20,823,502)
sequence
gaattcctgatctttccaaacttttatcatgaatgggtgttggatcttgt
caaatgctttttctgcatctaacgagatgatcatgtggtttttgtctttg
agtttgtttatataatggattacattgatggattttcgtatattaaacca
tccctgcatccctggaataaaacctacttggtcaggatggatgattgctt
taatgtggtcttggattccgttagcgggaattttattgaggatttttgca
tcgatattcataagagaaattggtctgaagttctctatctttgttgggtc
tttctgtggtttacgcctccgactaatcctggcttcataaaatgagttgg
gtagagtaccttctacttctattttgtgaaataggttgggcttcactgga
attaaatcatctttgtaggtctgatacaacactgcactaaacccatctgg
tcctgggctttgggccggggggagactattaataactgcttctattttct
ttacgggatatgggactgtgtggatgatcaacgggatactgagtcgactc
tgctacctggactctgtccaaaaatttgtccattttgttccagattttgc
cctttgttga
gaattcctttctcaattgtctcaaagaatttgagaagaatgatttgttat
aggtttattatagtgtggatctggaatgttcctgtaatgactgtgcattg
aaagattactccccagcaactgttataggagagatagagacttcaagtgg
gtcttagtgggaggtcccacttcatcatcagcagacactcaaacgttaca
tgaaaccctgagcccctccttttctcaattcacttcttcctaccttggag
caagcagctatcctgttgcacacccttgtcatgatgcttggccatggata
aaaagcagtgaggtggactgactttgaccgtgaaacctgcagaattgtga
gcaaaatcagccttttctcctatcatgtcactactttagtattcagttat
agtcacagaagcctgactaatataggatggaaggtgaatacgtctttatt
tcagctcagctagaaggagaaatttgttctttagagacctccgttttttt
tactcatatgtgtacattgcctaaagttgtaagatattaaataggcacac
cagttacagctatgggaaaatcccactttataaatccttcagtcacattc
gttctgttatgctcacatatttcttttttttttttttttttttttttcca
ttttttattaggtatttagctcatttacatttccaatgctataccaaaag
tcccccttacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_69054884_69055493
seq2: B6Ng01-034F03.b_44_653 (reverse)

seq1  TCAACAAAACTGGAAAACCTGG-ACAAAATGGACAAATTTCTGGACAGAT  49
      ||||| |||  | |||| |||| ||||||||||||||||| |||||||| 
seq2  TCAAC-AAAGGGCAAAATCTGGAACAAAATGGACAAATTTTTGGACAGAG  49

seq1  ACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAAACAGTCCC  99
       ||||||| || ||| || |||| |||  ||||| |||| | ||||||||
seq2  TCCAGGTAGCAGAGTCGACTCAGTATCCCGTTGATCATCCACACAGTCCC  99

seq1  ATATCACCTAAAG-AAATAGAAGCAGTTATTAATAGTCTCCCAACCAAAA  148
      ||||| | ||||| ||||||||||||||||||||||||||||  |     
seq2  ATATCCCGTAAAGAAAATAGAAGCAGTTATTAATAGTCTCCCCCCGGCCC  149

seq1  AAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAA  198
      |||||||||||||||||||||||||||||| ||| |||||||||| ||||
seq2  AAAGCCCAGGACCAGATGGGTTTAGTGCAGTGTTGTATCAGACCTACAAA  199

seq1  GAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGA  248
      || ||| |||||||| |   || ||| |||||||||||||||||||||||
seq2  GATGATTTAATTCCAGTGAAGCCCAACCTATTTCACAAAATAGAAGTAGA  249

seq1  AGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTA  298
      ||||||||||||||||||||||||||||||||  |||| || ||  | ||
seq2  AGGTACTCTACCCAACTCATTTTATGAAGCCAGGATTAGTCGGAGGCGTA  299

seq1  AACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTT  348
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AACCACAGAAAGACCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTT  349

seq1  ATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCA  398
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  ATGAATATCGATGCAAAAATCCTCAATAAAATTCCCGCTAACGGAATCCA  399

seq1  AGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAG  448
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAG  449

seq1  GGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTAT  499

seq1  ATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTTAGATGCAGA  549

seq1  AAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTGGAAA  598
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAG-TTTGGAAA  598

seq1  GATCAGGAATTC  610
      ||||||||||||
seq2  GATCAGGAATTC  610

seq1: chr19_20822792_20823502
seq2: B6Ng01-034F03.g_66_776

seq1  GAATTCCTTTCTCAATTGTCTCAAAGAATTTGAGAAGAATGATTTGTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTCAATTGTCTCAAAGAATTTGAGAAGAATGATTTGTTAT  50

seq1  AGGTTTATTATAGTGTGGATCTGGAATGTTCCTGTAATGACTGTGCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATTATAGTGTGGATCTGGAATGTTCCTGTAATGACTGTGCATTG  100

seq1  AAAGATTAGTCCCCAGCAACTGTTATAGGAGAGATAGAGACTTCAAGTGG  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTACTCCCCAGCAACTGTTATAGGAGAGATAGAGACTTCAAGTGG  150

seq1  GTCTTAGTGGGAGGTCCCACTTCATCAGCAGCAGACACTCAAACGTTACA  200
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTCTTAGTGGGAGGTCCCACTTCATCATCAGCAGACACTCAAACGTTACA  200

seq1  TGAAACCCTGAGCCCCTCCTTTTCTCAATTCACTTCTTCCTACCTTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCCTGAGCCCCTCCTTTTCTCAATTCACTTCTTCCTACCTTGGAG  250

seq1  CAAGCAGCTATCCTGTTGCACACCCTTGTCATGATGCTTGGCCATGGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGCTATCCTGTTGCACACCCTTGTCATGATGCTTGGCCATGGATA  300

seq1  AAAAGCAGTGAGGTGGACTGACTTTGACCGTGAAACCTGCAGAATTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGTGAGGTGGACTGACTTTGACCGTGAAACCTGCAGAATTGTGA  350

seq1  GCAAAATCAGCCTTTTCTCCTATCATGTCACTACTTTAGTATTCAGTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATCAGCCTTTTCTCCTATCATGTCACTACTTTAGTATTCAGTTAT  400

seq1  AGTCACAGAAGCCTGACTAATATAGGATGGAAGGTGAATACGTCTTTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGAAGCCTGACTAATATAGGATGGAAGGTGAATACGTCTTTATT  450

seq1  TCAGCTCAGCTAGAAGGAGAAATTTGTTCTTTAGAGACCTCCGTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCAGCTAGAAGGAGAAATTTGTTCTTTAGAGACCTCCGTTTTTTT  500

seq1  TACTCATATGTGTACATTGCCTAAAGTTGTAAGATATTAAATAGGCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATATGTGTACATTGCCTAAAGTTGTAAGATATTAAATAGGCACAC  550

seq1  CAGTTACAGCTATGGGAAAATCCCACTTTATAAATCCTTCAGTCACATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACAGCTATGGGAAAATCCCACTTTATAAATCCTTCAGTCACATTC  600

seq1  GTTCTGTTATGCTCACATATTTCTTTTTTTTTTTTTTTTTTTTTTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTATGCTCACATATTTCTTTTTTTTTTTTTTTTTTTTTTTTCCA  650

seq1  TTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAG  700

seq1  TCCCCCTTACC  711
      |||||||||||
seq2  TCCCCCTTACC  711