BAC Information

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BAC

Clone NameB6Ng01-034O05
Chromosome12 (Build37)
Map Location 7,239,899 - 7,254,233
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC238049, LOC100042118
Downstream geneLOC668380, EG668388, Apob, 1110057K04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034O05.bB6Ng01-034O05.g
ACCDH863508DH863509
length9471,206
definitionDH863508|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O05, 5' end.DH863509|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,239,899 - 7,240,854)(7,253,016 - 7,254,233)
sequence
gaattcaggtgtggttagagcattttcaaaagcaaaatataaaagcaata
caggacaattcagccgagatgattcttctgaattcactgtactgcaaggt
atacaataaaagtctgaaatacaaccagcaacattaaagaaaaatgagag
agagatgtgcaatgttggtaagagactaatgaatattatcacattattta
tgcagtttaagaagatcaaatatgacaaatgtaatactagaacaatggaa
ttaatctattaaaccaatggatgatatcagttcatcccttatataaaata
tgccttctaagtggcatttcagtctacctacaaagtacgttataggcata
aattccctatgcacagtataataaaccagaaatttattacaaaatgattt
caaaaccaacataatcacttgtaaataaaacaaaatctctgctaaatcat
attcagctcagaagctaaatcgaatctgcagcatcaagttattaaattta
actacaggaaggttgttatgcgtcacgctaatctcatcacagctattggg
tctctttcaggtgtggttagagctttataaaaagcaaaattcatttacct
aattatgtttttcattaaataagaaagaatgaaacaaaatgcaactaata
ttaaactccacaaattaagaaattcatattaaataaacctaataagtcaa
tagctactaattttgaacagtaacagtttaaaatttatgagaatgcattg
tttttcatcattatttatgttaattgtgtgtgtgtgcgtgtgtgtatgca
tgtgcatgtgtacatgtgtctgtgtccatggggttgtatgcacatatgtg
tacaggtgcccaagagttgtcacttgagtaatactgtaaatttcccatct
ttgattatagtttaatcaaagaatctctttggtgggaggtgttatat

gaattctctccacttctagctgtgacatcagtaatctcagctaaccttta
ctttcaggtgattggcttcctttcctatttcctttgacaaatgactttaa
atgttcattattgtccttgaggcccatatccaaacctcaagtccagaaat
tcgagtggtaaatctctttttcactttgggagaaagggaggaaaattgag
tggatttcatctgattaccttcaagtcctggcatttctactttatattta
aatttacctatttgtcccaagtagttattccttccctttccagtgcctgg
ggaatgagctggtttctttccttctcaagggcaaagcttacatagcactt
gtgcgccagacctcattattctttctgtggaattcctaggtttgctccta
acttaccctcagtctttactgaatgctcatcctgtccattttcattgata
acttccaaggacaaccaccctgttgttttctttttcaaatcttaatttca
agaatagctcattgggatataaagatgattcagtgattaagagcaagtac
tgatggcccttgcaagggacccagtttggtccccagtactcatgtgggac
aactctctgtaactacagttcccccagggatcgaatgcttctgatcccta
atgtcacctgtattcacatgcacataccctgcacacaaacacacaattaa
aactacaataaaattaaaaagaaaagaaaccttatttcttgtcaataccc
tatggccttaatgtaacccatgaccatgaatgtgggtttctcttactgtt
atatcttgttcttgtattttatgtcatttaaaaatgttaacttatatata
tttgtaagaaaaatgatttttctaatacatgtattgcaaagtaattttgt
aaattcttcccatttattcttctaggtcttcttgctactatgtctttatt
ctttcgtactggaagactaaccattctacatattagagttttcctatatt
tctaattatattaaaataattaactattttggtccatccgttcatctcaa
cttccacaatttgttctggactaccagtaccctggaggctcttgactcta
gctgatatgtatcaaaagtgccctatcgcctctctggagagaagagtcat
tggacgccaactttaattgctccgatctcacggggaacccaggccaaaag
gggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7239899_7240854
seq2: B6Ng01-034O05.b_44_990

seq1  GAATTCAGGTGTGGTTAGAGCATTTTCAAAAGCAAAATATAAAAGCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTGTGGTTAGAGCATTTTCAAAAGCAAAATATAAAAGCAATA  50

seq1  CAGGACAATTCAGCCGAGATGATTCTTCTGAATTCACTGTACTGCAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAATTCAGCCGAGATGATTCTTCTGAATTCACTGTACTGCAAGGT  100

seq1  ATACAATAAAAGTCTGAAATACAACCAGCAACATTAAAGAAAAATGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATAAAAGTCTGAAATACAACCAGCAACATTAAAGAAAAATGAGAG  150

seq1  AGAGATGTGCAATGTTGGTAAGAGACTAATGAATATTATCACATTATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGTGCAATGTTGGTAAGAGACTAATGAATATTATCACATTATTTA  200

seq1  TGCAGTTTAAGAAGATCAAATATGACAAATGTAATACTAGAACAATGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTAAGAAGATCAAATATGACAAATGTAATACTAGAACAATGGAA  250

seq1  TTAATCTATTAAACCAATGGATGATATCAGTTCATCCCTTATATAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTATTAAACCAATGGATGATATCAGTTCATCCCTTATATAAAATA  300

seq1  TGCCTTCTAAGTGGCATTTCAGTCTACCTACAAAGTACGTTATAGGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCTAAGTGGCATTTCAGTCTACCTACAAAGTACGTTATAGGCATA  350

seq1  AATTCCCTATGCACAGTATAATAAACCAGAAATTTATTACAAAATGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCTATGCACAGTATAATAAACCAGAAATTTATTACAAAATGATTT  400

seq1  CAAAACCAACATAATCACTTGTAAATAAAACAAAATCTCTGCTAAATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAACATAATCACTTGTAAATAAAACAAAATCTCTGCTAAATCAT  450

seq1  ATTCAGCTCAGAAGCTAAATCGAATCTGCAGCATCAAGTTATTAAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCTCAGAAGCTAAATCGAATCTGCAGCATCAAGTTATTAAATTTA  500

seq1  ACTACAGGAAGGTTGTTATGCGTCACGCTAATCTCATCACAGCTATTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGGAAGGTTGTTATGCGTCACGCTAATCTCATCACAGCTATTGGG  550

seq1  TCTCTTTCAGGTGTGGTTAGAGCTTTATAAAAAGCAAAATTCATTTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCAGGTGTGGTTAGAGCTTTATAAAAAGCAAAATTCATTTACCT  600

seq1  AATTATGTTTTTCATTAAATAAGAAAGAATGAAACAAAATGCAACTAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTTTTTCATTAAATAAGAAAGAATGAAACAAAATGCAACTAATA  650

seq1  TTAAACTCCACAAATTAAGAAATTCATATTAAATAAACCTAATAAGTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCCACAAATTAAGAAATTCATATTAAATAAACCTAATAAGTCAA  700

seq1  TAGCTACTAATTTTGAACAGTAACAGTTTAAAATTTATGAGAATGCATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTAATTTTGAACAGTAACAGTTTAAAATTTATGAGAATGCATTG  750

seq1  TTTTTCATCATTATTTATGTTAATTGTGTGTGTGTGCGTGTGTGTATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATCATTATTTATGTTAATTGTGTGTGTGTGCGTGTGTGTATGCA  800

seq1  TGTGCATGTGTACATGTGTCTGTGTCCATGGGGTTGTATGCACATATGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTGTACATGTGTCTGTGTCCATGGGGTTGTATGCACATATGTG  850

seq1  TACAGGTGCCCAAGAAGTTGTTAACTTGAAGTAATACTGTAAATTTCCCC  900
      |||||||||||||| ||||| | ||||| |||||||||||||||||||| 
seq2  TACAGGTGCCCAAG-AGTTG-TCACTTG-AGTAATACTGTAAATTTCCC-  896

seq1  AATCTTTGATTATAGTTTAAATCAAAGAAATCTTCTTTGGTGGGAGGTGG  950
       ||||||||||||||||| |||||||| |||| ||||||||||||||| |
seq2  -ATCTTTGATTATAGTTT-AATCAAAG-AATC-TCTTTGGTGGGAGGT-G  941

seq1  TTATAT  956
      ||||||
seq2  TTATAT  947


seq1: chr12_7253016_7254233
seq2: B6Ng01-034O05.g_68_1273 (reverse)

seq1  ACTCCCCCTTTTTGGCCCTGGCGTTCCCC-TG-TACTGGGGCATATAAAG  48
      |||||||  |||||| ||||| ||||||| ||  |  || |||  |||||
seq2  ACTCCCC--TTTTGG-CCTGG-GTTCCCCGTGAGATCGGAGCAATTAAAG  46

seq1  TTTGCGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATC  98
      || ||  ||||||||   || ||| ||||| ||  | ||| |||| || |
seq2  TTGGC--GTCCAATGACTCT-TCTCTCCAGAGA--GGCGA-TAGGGCA-C  89

seq1  TTTTGATACATATGCAGCTAGAGTCAAGAG-CTCCAGGGTACTGGTTAGT  147
      ||||||||||||| |||||||||||||||| |||||||||||||| ||||
seq2  TTTTGATACATAT-CAGCTAGAGTCAAGAGCCTCCAGGGTACTGG-TAGT  137

seq1  TCAGAGACAAA-TGTTGGAGTTGAGATGAAAGGATGGACC-ATATAGTTA  195
       |||| ||||| ||| | |||||||||||| ||||||||| | |||||||
seq2  CCAGA-ACAAATTGTGGAAGTTGAGATGAACGGATGGACCAAAATAGTTA  186

seq1  ATTATTTTAATATTAATTAGAAATATAGGAAAACTCTAATATGTAGAATG  245
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTAATA-TAATTAGAAATATAGGAAAACTCTAATATGTAGAATG  235

seq1  GTTAGTCTTCCAGTACGAAAGAATAAAGACATAGTTAGCAAGAAGACCTA  295
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTAGTCTTCCAGTACGAAAGAATAAAGACATAG-TAGCAAGAAGACCTA  284

seq1  GAAGAATAAATGGGAAGAATTTACAAAATTACTTTGCAATACATGTATTA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATAAATGGGAAGAATTTACAAAATTACTTTGCAATACATGTATTA  334

seq1  GAAAAATCATTTTTTCTTACAAATATATATAAGTTAACATTTTTAAATGA  395
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCA-TTTTTCTTACAAATATATATAAGTTAACATTTTTAAATGA  383

seq1  CATAAAATACAAGAACAAGATATAACAGTAAGAGAAACCCACATTCATGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATACAAGAACAAGATATAACAGTAAGAGAAACCCACATTCATGG  433

seq1  TCATGGGTTACATTAAGGCCATAGGGTATTGACAAGAAATAAGGTTTCTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGTTACATTAAGGCCATAGGGTATTGACAAGAAATAAGGTTTCTT  483

seq1  TTCTTTTTAATTTTATTGTAGTTTTAATTGTGTGTTTGTGTGCAGGGTAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTAATTTTATTGTAGTTTTAATTGTGTGTTTGTGTGCAGGGTAT  533

seq1  GTGCATGTGAATACAGGTGACATTAGGGATCAGAAGCATTCGATCCCTGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTGAATACAGGTGACATTAGGGATCAGAAGCATTCGATCCCTGG  583

seq1  GGGAACTGTAGTTACAGAGAGTTGTCCCACATGAGTACTGGGGACCAAAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTGTAGTTACAGAGAGTTGTCCCACATGAGTACTGGGGACCAAAC  633

seq1  TGGGTCCCTTGCAAGGGCCATCAGTACTTGCTCTTAATCACTGAATCATC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCCTTGCAAGGGCCATCAGTACTTGCTCTTAATCACTGAATCATC  683

seq1  TTTATATCCCAATGAGCTATTCTTGAAATTAAGATTTGAAAAAGAAAACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCCCAATGAGCTATTCTTGAAATTAAGATTTGAAAAAGAAAACA  733

seq1  ACAGGGTGGTTGTCCTTGGAAGTTATCAATGAAAATGGACAGGATGAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGGTTGTCCTTGGAAGTTATCAATGAAAATGGACAGGATGAGCA  783

seq1  TTCAGTAAAGACTGAGGGTAAGTTAGGAGCAAACCTAGGAATTCCACAGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAAAGACTGAGGGTAAGTTAGGAGCAAACCTAGGAATTCCACAGA  833

seq1  AAGAATAATGAGGTCTGGCGCACAAGTGCTATGTAAGCTTTGCCCTTGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAATGAGGTCTGGCGCACAAGTGCTATGTAAGCTTTGCCCTTGAG  883

seq1  AAGGAAAGAAACCAGCTCATTCCCCAGGCACTGGAAAGGGAAGGAATAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGAAACCAGCTCATTCCCCAGGCACTGGAAAGGGAAGGAATAAC  933

seq1  TACTTGGGACAAATAGGTAAATTTAAATATAAAGTAGAAATGCCAGGACT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGGACAAATAGGTAAATTTAAATATAAAGTAGAAATGCCAGGACT  983

seq1  TGAAGGTAATCAGATGAAATCCACTCAATTTTCCTCCCTTTCTCCCAAAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTAATCAGATGAAATCCACTCAATTTTCCTCCCTTTCTCCCAAAG  1033

seq1  TGAAAAAGAGATTTACCACTCGAATTTCTGGACTTGAGGTTTGGATATGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAGATTTACCACTCGAATTTCTGGACTTGAGGTTTGGATATGG  1083

seq1  GCCTCAAGGACAATAATGAACATTTAAAGTCATTTGTCAAAGGAAATAGG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAGGACAATAATGAACATTTAAAGTCATTTGTCAAAGGAAATAGG  1133

seq1  AAAGGAAGCCAATCACCTGAAAGTAAAGGTTAGCTGAGATTACTGATGTC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGCCAATCACCTGAAAGTAAAGGTTAGCTGAGATTACTGATGTC  1183

seq1  ACAGCTAGAAGTGGAGAGAATTC  1218
      |||||||||||||||||||||||
seq2  ACAGCTAGAAGTGGAGAGAATTC  1206


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