BAC Information

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BAC

Clone NameB6Ng01-035D20
Chromosome10 (Build37)12 (Build37)
Map Location 104,053,903 - 104,054,36397,394,845 - 97,394,964
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2, EG627573
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035D20.bB6Ng01-035D20.g
ACCDH863763DH863764
length851120
definitionDH863763|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D20, 5' end.DH863764|Mus musculus domesticus DNA, BAC clone: B6Ng01-035D20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(104,053,903 - 104,054,363)(97,394,845 - 97,394,964)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaata
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggttacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagttttgagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccacaatc
agcatccaaacgctgacaccattgcatacactagcagattttatgaaagg
a
tgccttcatctgaaggtttcttactttttaaatggtgatggaatattctt
ctctaaaggcaaaaacaatgtcatcctccccgagattcagaaaatgctgt
gtaaggggggggggggggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104053903_104054363
seq2: B6Ng01-035D20.b_41_511 (reverse)

seq1  TTTAATAG----------CTCCATTGTGTAAATGTACCACATTTTCTGTA  40
      ||||||||          ||| |||||||| |||||||||||||||||||
seq2  TTTAATAGCTGAGTAGTACTCTATTGTGTAGATGTACCACATTTTCTGTA  50

seq1  TCTATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTCCTGGCTATT  90
      || |||||||||||||||||||||| |||||||||||||| |||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTAGGTTCTTTCCAGCTTCTGGCTATT  100

seq1  ATAAATAAGGCTGCTATGAATATAGTGGAGCATGTGTCCTTCTTACCGGT  140
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGT  150

seq1  TGGGGCATCTTCTGGATATATGCCCAGAAGAGGTATTGCTGGATCCTCCG  190
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCG  200

seq1  GTAGTACTATGTCCAATTTTCTGACGAACCGCCAGACGGATTTCCAGAGT  240
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTCCAGAGT  250

seq1  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTC  300

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCA  350

seq1  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCC  400

seq1  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCG  450

seq1  GTATTCCTCAGGTGAGAATTC  461
      |||||||||||||||||||||
seq2  GTATTCCTCAGGTGAGAATTC  471

seq1: chr12_97394845_97394964
seq2: B6Ng01-035D20.g_71_190

seq1  TGCCTTCATCTGAAGGTTTCTTACTTTTTAAATGGTGATGGAATATTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCATCTGAAGGTTTCTTACTTTTTAAATGGTGATGGAATATTCTT  50

seq1  CTCTAAAGGCAAAAACAATGTCATCCTCCCCGAGATTCAGAAAATGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGGCAAAAACAATGTCATCCTCCCCGAGATTCAGAAAATGCTGT  100

seq1  GTAAGGGGGGGGGGGGGGCA  120
      ||||||||||||||||||||
seq2  GTAAGGGGGGGGGGGGGGCA  120