BAC Information

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BAC

Clone NameB6Ng01-037C09
Chromosome12 (Build37)
Map Location 36,408,876 - 36,409,667
singlet/doubletsinglet
Overlap genenone
Upstream gene4921508M14Rik, Prps1l1, Snx13, Ahr, LOC100043575
Downstream geneLOC629758, LOC100043579, LOC669866, Agr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037C09.bB6Ng01-037C09.g
ACCDH865113DH865114
length761792
definitionDH865113|Mus musculus domesticus DNA, BAC clone: B6Ng01-037C09, 5' end.DH865114|Mus musculus domesticus DNA, BAC clone: B6Ng01-037C09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctataaattttttaatttctcattactagtcttgaccatttttca
ttcaatggagggtttttaatttgacatgagtttgttctgttgttgatgaa
gtccagtggtgtaataggacgcaggggtcatttcaattttctttttttgt
taagacttgctttgtgactgagtgtgtggtcagttttggaaaagggtcca
tgaagtattgagaagaagatatatttttctgtgcttgggtgaaatgttct
gtaattacttgttatatctatttgaattattatgtctgttagctccaata
tttttctatttagtttttatctgtttgatctgcctttggtgagagtgagg
tgttgaaatctcacacaatcagtgtgtgagggtcaatatgtgatttaagc
ttatagtagtgtttcttttcaaaagtggatgcccatgagtttggtggata
gatattaagaattgcgttgtcttcatggtggatttttcctttgatgagta
tatagtatctttccccatctcttggttagttttggtttaaagtttatttt
ataagctattaaaatggctatattaacttgcatcttaagtccttagaata
ttttttttctaaccttaaccttgagataatgtctgtccatgatgtttttt
atgtttctttggatgcagtagtaccattcatagtgagagataccagtgac
ttgattcttgccatttttgttgtgctgctgctgctggtgatggtattggt
ggtagtggctt
gaattcttttatcagtcacagaatttgaaacaaatacagaaaagcaagca
aagcatggccaggtatggtggtgaagacaggcaggatgtgggttgctgct
gagttcggactgacagtgcctgcagtgagcaacgctgtgtctgagacttg
ctgaaagatccaaagctgagatctgggagctcactatctgctgcaagttt
tccagcagggctttgtagtccatccaagtgatgatttcaggtcccgccat
tgcagagtaaagatatgtagagcactagggtgacttggctggcagcagag
cattcagccacaaatgggacatctataccacataccctcccccaagactc
agggagcaccacagaaagggagaagaaacattctaagagacagagagctg
ctgtgaagcagcatcatctggacatgacagaacttctgacacatgatctc
acagcaactgcagctgcccgaacaaaacatgcacaagaccaagatagtca
acatctaaacatggggaggacgctcatgaggccaccactcctgcctggtg
atctctggactgttgagggcttcttggggaagaagagtcagttttccttt
aaggatgaggtccaggtaggttgaccatgctctagtggatggcttctcgt
agatgtacgtgggcaacacagcatgaactctgtgggttataaaaatataa
acaaaggagaacatgaagttgggatattctccatgagtaggggaatagag
atggatctggtaagagttaaggataggagcttgggttaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_36408876_36409667
seq2: B6Ng01-037C09.g_70_861

seq1  GAATTCTTTTTATCAGTCACAGAATTTGAAACAAATACAGAAAAGCAAGC  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTC-TTTTATCAGTCACAGAATTTGAAACAAATACAGAAAAGCAAGC  49

seq1  AAAGCATGGCCAGGTATGGTGGTGAAGACAGGCAGGATGTGGGTTGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATGGCCAGGTATGGTGGTGAAGACAGGCAGGATGTGGGTTGCTGC  99

seq1  TGAGTTCGGACTGACAGTGCCTGCAGTGAGCAACGCTGTGTCTGAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCGGACTGACAGTGCCTGCAGTGAGCAACGCTGTGTCTGAGACTT  149

seq1  GCTGAAAGATCCAAAGCTGAGATCTGGGAGCTCACTATCTGCTGCAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGATCCAAAGCTGAGATCTGGGAGCTCACTATCTGCTGCAAGTT  199

seq1  TTCCAGCAGGGCTTTGTAGTCCATCCAAGTGATGATTTCAGGTCCCGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCAGGGCTTTGTAGTCCATCCAAGTGATGATTTCAGGTCCCGCCA  249

seq1  TTGCAGAGTAAAGATATGTAGAGCACTAGGGTGACTTGGCTGGCAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGTAAAGATATGTAGAGCACTAGGGTGACTTGGCTGGCAGCAGA  299

seq1  GCATTCAGCCACAAATGGGACATCTATACCACATACCCTCCCCCAAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCAGCCACAAATGGGACATCTATACCACATACCCTCCCCCAAGACT  349

seq1  CAGGGAGCACCACAGAAAGGGAGAAGAAACATTCTAAGAGACAGAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGCACCACAGAAAGGGAGAAGAAACATTCTAAGAGACAGAGAGCT  399

seq1  GCTGTGAAGCAGCATCATCTGGACATGACAGAACTTCTGACACATGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAAGCAGCATCATCTGGACATGACAGAACTTCTGACACATGATCT  449

seq1  CACAGCAACTGCAGCTGCCCGAACAAAACATGCACAAGACCAAGATAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAACTGCAGCTGCCCGAACAAAACATGCACAAGACCAAGATAGTC  499

seq1  AACATCTAAACATGGGGAGGACGCTCATGAGGCCACCACTCCTGCCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTAAACATGGGGAGGACGCTCATGAGGCCACCACTCCTGCCTGGT  549

seq1  GATCTCTGGACTGTTGAGGGCTTCTTGGGGAAGAAGAGTCAG-TTTCCTT  599
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATCTCTGGACTGTTGAGGGCTTCTTGGGGAAGAAGAGTCAGTTTTCCTT  599

seq1  TAAGGATGAGGTCCAGGTAGGTTGACCATGCTCTAGTGGATGGCTTCTCG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATGAGGTCCAGGTAGGTTGACCATGCTCTAGTGGATGGCTTCTCG  649

seq1  TAGATGTACGTGGGCAACACAGCATGAACTCTGTGGGTTATAAAAATATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTACGTGGGCAACACAGCATGAACTCTGTGGGTTATAAAAATATA  699

seq1  AACAAAGGAGAACATGAAGTTGGGATATTCTCCATGAGTAGGGGAATAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGAGAACATGAAGTTGGGATATTCTCCATGAGTAGGGGAATAGA  749

seq1  GATGGATCTGGTAAGAGTTAAGGAGAGGAGCTGGGGTTAATAC  792
      |||||||||||||||||||||||| ||||||| |||||||| |
seq2  GATGGATCTGGTAAGAGTTAAGGATAGGAGCTTGGGTTAATTC  792