BAC Information

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BAC

Clone NameB6Ng01-037N24
Chromosome12 (Build37)
Map Location 40,487,380 - 40,488,333
singlet/doubletsinglet
Overlap genenone
Upstream geneEtv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277, Dock4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037N24.bB6Ng01-037N24.g
ACCDH865609DH865610
length1,161954
definitionDH865609|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N24, 5' end.DH865610|Mus musculus domesticus DNA, BAC clone: B6Ng01-037N24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaatat
tcaacatccttaattatcagagaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggcgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaaatcagtctggtggttccttag
aaaattggacatagtactaccggaggaggattcagcaatacctctcctgg
gcatatatccagaagatgtcccaaccggcatgaaggacacatgctccact
atgttcatagcagccttatttataatagccagaagctggaaagaacccag
atgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaa
tggagtactactcagctattaaaaacaatgaatttatgaaattcctaggc
aaatggatggacctcgagggcatcttcctgagcaaggtaacccaatcata
aaggaactcacacaatatgtactcactgataagtggattttattccaaaa
cttaggatatccaagatataagatacaatttgccaagtgcatgaaactct
agaagaatgaagaccaaagtgtggacactgtgccccttcttagaattggg
aacaaaacacccatggaaggagtttcagagacaaagtttggagctgtgac
aaaaggatggaccatctagagactgccatatctagggatccactccgtaa
tcagcttccaaacgctgacaccattgcatacactagcaagattttgctga
aaggacacagatatagctgtctcttgttgagactaggccggggcctagca
aacacataattgggatgctcacaggtcagctattggatggatcacagggc
ccccaatggaggagctagagaagtatccaaggagcttaagagagctgcaa
ccctgtaggtgctacacatattgactacagtacccagagctcttggctct
actacatatgtatcaaagaatggcctggtcgggcatcactggaagaaccc
attggaaccgcaacttttattgcccgttcaggaaggccaggcccaaaaat
gtgaatgttgg
gaattcctcctatatcatcttcctgaccttttaaggccagggaagaaatt
ctgaaggggtgttttcattgagaacatgtgtttatgttcctcagctaaaa
atcaagctatggaatgtgaaggatgcagaacttctagaatggcaagaggc
aggtgttagatctcttctcaagacaacagcctgtgaaagtcactgaaaat
agtccttatggccacagagggaataagacccacccattcagataaaccct
ctagttctcagtgataacagcaagacctcatggcttttgactcagagctg
ttcctttaacctctactctgaccatacatcacagatgctctgtcccaggt
gcagctgtcaccaagagaagggctttcttttccttaaccttacaatctgg
tttaacttggcaaacgtctctttccggcagacgtgcttcttttttcttat
ttcttaatggtgaactaaatgtgacaggttgaaaatactgtggccacaat
tgtcctggaaagaacattccacacaagaagggtcaagggagggaggaaga
gtcagccaccctgctcctcccctttaatgacgcccagcagactgtcaaag
cagcacctgctcctaaactctgaggaagtgatatgcaggttctgctcagc
aggaaaatgggacaggaggggaaggaagtctttggctctgcctggggaac
tggttttatttggagcagagcatggaaaattttttacttaaggaaaaaaa
aaaaaaaaccaccaaaaaacaaaaaaccaaaaacagtggctatcttggca
aagaacaagccagagaccagaagggggctggcacatcttgtaacaagcca
aataactaaggtaacaagaagtttgacagaaaatattctgaaaaactaaa
acaaaatagaaacctgacggacagccaaaaatatcaaaccaaacaacaaa
aaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_40487380_40488333
seq2: B6Ng01-037N24.g_68_1021 (reverse)

seq1  TTTTTTTGTTTGTTTGTTTTGATATTTTTTTGCTTGTCTGTTCGGTTTTT  50
      |||||||| ||||||| |||||||  ||||||  |||| ||  ||  |||
seq2  TTTTTTTG-TTGTTTGGTTTGATA--TTTTTGGCTGTCCGTCAGG--TTT  45

seq1  CTATTTTTTGTTTTAGTTTTTCAG-ATA-TTTCTGTCAAACTTCTTG-TA  97
      |||  ||||||||||||||||||| ||| |||||||||||||||||| ||
seq2  CTA--TTTTGTTTTAGTTTTTCAGAATATTTTCTGTCAAACTTCTTGTTA  93

seq1  CCTTAGTTATTTGGCTTG-TAC-AGATGTGCCAG-CCCCTTCTGGTCTCT  144
      |||||||||||||||||| ||| ||||||||||| |||||||||||||||
seq2  CCTTAGTTATTTGGCTTGTTACAAGATGTGCCAGCCCCCTTCTGGTCTCT  143

seq1  GGCTTGTTCTTTGCCAAGATAGCCACTGTTTTTGGTTTTTTGTTTTTTGG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTTCTTTGCCAAGATAGCCACTGTTTTTGGTTTTTTGTTTTTTGG  193

seq1  TGG-TTTTTTTTTTTTTTCCTTAAGTAAAAAATTTTCCATGCTCTGCTCC  243
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTTTTTTTTTTTCCTTAAGTAAAAAATTTTCCATGCTCTGCTCC  243

seq1  AAATAAAACCAGTTCCCCAGGCAGAGCCAAAGACTTCCTTCCCCTCCTGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACCAGTTCCCCAGGCAGAGCCAAAGACTTCCTTCCCCTCCTGT  293

seq1  CCCATTTTCCTGCTGAGCAGAACCTGCATATCACTTCCTCAGAGTTTAGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTCCTGCTGAGCAGAACCTGCATATCACTTCCTCAGAGTTTAGG  343

seq1  AGCAGGTGCTGCTTTGACAGTCTGCTGGGCGTCATTAAAGGGGAGGAGCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGCTGCTTTGACAGTCTGCTGGGCGTCATTAAAGGGGAGGAGCA  393

seq1  GGGTGGCTGACTCTTCCTCCCTCCCTTGACCCTTCTTGTGTGGAATGTTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGCTGACTCTTCCTCCCTCCCTTGACCCTTCTTGTGTGGAATGTTC  443

seq1  TTTCCAGGACAATTGTGGCCACAGTATTTTCAACCTGTCACATTTAGTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGGACAATTGTGGCCACAGTATTTTCAACCTGTCACATTTAGTTC  493

seq1  ACCATTAAGAAATAAGAAAAAAGAAGCACGTCTGCCGGAAAGAGACGTTT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAAGAAATAAGAAAAAAGAAGCACGTCTGCCGGAAAGAGACGTTT  543

seq1  GCCAAGTTAAACCAGATTGTAAGGTTAAGGAAAAGAAAGCCCTTCTCTTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTTAAACCAGATTGTAAGGTTAAGGAAAAGAAAGCCCTTCTCTTG  593

seq1  GTGACAGCTGCACCTGGGACAGAGCATCTGTGATGTATGGTCAGAGTAGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCTGCACCTGGGACAGAGCATCTGTGATGTATGGTCAGAGTAGA  643

seq1  GGTTAAAGGAACAGCTCTGAGTCAAAAGCCATGAGGTCTTGCTGTTATCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAGGAACAGCTCTGAGTCAAAAGCCATGAGGTCTTGCTGTTATCA  693

seq1  CTGAGAACTAGAGGGTTTATCTGAATGGGTGGGTCTTATTCCCTCTGTGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACTAGAGGGTTTATCTGAATGGGTGGGTCTTATTCCCTCTGTGG  743

seq1  CCATAAGGACTATTTTCAGTGACTTTCACAGGCTGTTGTCTTGAGAAGAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAGGACTATTTTCAGTGACTTTCACAGGCTGTTGTCTTGAGAAGAG  793

seq1  ATCTAACACCTGCCTCTTGCCATTCTAGAAGTTCTGCATCCTTCACATTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACACCTGCCTCTTGCCATTCTAGAAGTTCTGCATCCTTCACATTC  843

seq1  CATAGCTTGATTTTTAGCTGAGGAACATAAACACATGTTCTCAATGAAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCTTGATTTTTAGCTGAGGAACATAAACACATGTTCTCAATGAAAA  893

seq1  CACCCCTTCAGAATTTCTTCCCTGGCCTTAAAAGGTCAGGAAGATGATAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTCAGAATTTCTTCCCTGGCCTTAAAAGGTCAGGAAGATGATAT  943

seq1  AGGAGGAATTC  954
      |||||||||||
seq2  AGGAGGAATTC  954