BAC Information

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BAC

Clone NameB6Ng01-038O10
Chromosome12 (Build37)
Map Location 66,178,471 - 66,179,461
singlet/doubletsinglet
Overlap geneFancm
Upstream geneEG623046, LOC623123, LOC217645, LOC217647, Gm527, Klhl28, A430041B07Rik, Prpf39, Fkbp3
Downstream geneC79407, Wdr20b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038O10.bB6Ng01-038O10.g
ACCDH866324DH866325
length9951,175
definitionDH866324|Mus musculus domesticus DNA, BAC clone: B6Ng01-038O10, 5' end.DH866325|Mus musculus domesticus DNA, BAC clone: B6Ng01-038O10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactacgtagaccaggctggtcttgaactctcagagctctgcagg
cctctgataggcatatgctaccacactcaactctctgatatcttcttaac
tttagcaagagtattagtcagggttctctagagtcacagaacttatgggt
agtctctatgtagtaagggaatttgttgatgacttacagtctacagtcca
actcccaaacaatggcagctgcagctgtgactggaagtccaaggatctag
cagttgcttaggtccacaaggcaagcaggcaaagaagagagaatctgctt
ccaatgtccttgtgtaggtccccactagaaggtgtggcccagataaaggt
gtgtgccatcatgcctggataatgtcagatgtaggttgtgtttcttccct
tccttctcagtaaggaatttccacctttaagaatttgcttctcctcataa
cttattctcttctgtaagaattatttaaagacattataatttcattctta
catagcagctctctttgacacagagccaaaatgaaacattccaaatgaac
tgtttgtttgtttgtttgtttgtttttcgagacaaggtatcgttttgtag
ccctggctgttctggaactcactttgtagaccaggctggcctggaactca
gaaatccacctgcctccgtctccggagtgctgggattaaaggtgtgcgcc
accactgcctggctcaatgaactgttcaattgtcctccccttaaatagaa
tacctggtatgtaagcattcttaaagtaggtaagactgtagttataatgt
ttggataagcctggtctttagtttaggcaataaagtacaatatatgtgga
agtaatgatcccagttttggaagtggatatccactgcctatgtttggaat
gacaccaatggcaataagatgggataagatgacaaacacttgtcagtctt
agtgcatgtacgtgtgtgcatgattgtgttgtgtgtgtgtgtgtg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctgcaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtcagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaatc
taggataccaaagatataagatacaattttctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactgtgccagggcctagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggctccca
atggagagctagaggaagtgctcaaggagctaaaggatctgcactctata
ggtggaacaacattatgactaaccagtacctcggagctcttgacttctag
ctgcatatgtatcaaaatggcctagtcagccatcctgtaaggaaggccat
tgaacgccactgatatgctcatacagggaatgccaggccaaaaaatggat
ggggtgttaggaaagtgttgggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_66178471_66179461
seq2: B6Ng01-038O10.b_49_1043

seq1  GAATTCACTACGTAGACCAGGCTGGTCTTGAACTCTCAGAGCTCTGCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACGTAGACCAGGCTGGTCTTGAACTCTCAGAGCTCTGCAGG  50

seq1  CCTCTGATAGGCATATGCTACCACACTCAACTCTCTGATATCTTCTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGATAGGCATATGCTACCACACTCAACTCTCTGATATCTTCTTAAC  100

seq1  TTTAGCAAGAGTATTAGTCAGGGTTCTCTAGAGTCACAGAACTTATGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAAGAGTATTAGTCAGGGTTCTCTAGAGTCACAGAACTTATGGGT  150

seq1  AGTCTCTATGTAGTAAGGGAATTTGTTGATGACTTACAGTCTACAGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTATGTAGTAAGGGAATTTGTTGATGACTTACAGTCTACAGTCCA  200

seq1  ACTCCCAAACAATGGCAGCTGCAGCTGTGACTGGAAGTCCAAGGATCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAAACAATGGCAGCTGCAGCTGTGACTGGAAGTCCAAGGATCTAG  250

seq1  CAGTTGCTTAGGTCCACAAGGCAAGCAGGCAAAGAAGAGAGAATCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTTAGGTCCACAAGGCAAGCAGGCAAAGAAGAGAGAATCTGCTT  300

seq1  CCAATGTCCTTGTGTAGGTCCCCACTAGAAGGTGTGGCCCAGATAAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTCCTTGTGTAGGTCCCCACTAGAAGGTGTGGCCCAGATAAAGGT  350

seq1  GTGTGCCATCATGCCTGGATAATGTCAGATGTAGGTTGTGTTTCTTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCATCATGCCTGGATAATGTCAGATGTAGGTTGTGTTTCTTCCCT  400

seq1  TCCTTCTCAGTAAGGAATTTCCACCTTTAAGAATTTGCTTCTCCTCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTCAGTAAGGAATTTCCACCTTTAAGAATTTGCTTCTCCTCATAA  450

seq1  CTTATTCTCTTCTGTAAGAATTATTTAAAGACATTATAATTTCATTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTCTTCTGTAAGAATTATTTAAAGACATTATAATTTCATTCTTA  500

seq1  CATAGCAGCTCTCTTTGACACAGAGCCAAAATGAAACATTCCAAATGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCAGCTCTCTTTGACACAGAGCCAAAATGAAACATTCCAAATGAAC  550

seq1  TGTTTGTTTGTTTGTTTGTTTGTTTTTCGAGACAAGGTATCGTTTTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTGTTTGTTTTTCGAGACAAGGTATCGTTTTGTAG  600

seq1  CCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGGCTGGCCTGGAACTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGGCTGGCCTGGAACTCA  650

seq1  GAAATCCACCTGCCTCCGTCTCCGGAGTGCTGGGATTAAAGGTGTGCGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCACCTGCCTCCGTCTCCGGAGTGCTGGGATTAAAGGTGTGCGCC  700

seq1  ACCACTGCCTGGCTCAATGAACTGTTCAATTGTCCTCCCCTTAAATAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGCCTGGCTCAATGAACTGTTCAATTGTCCTCCCCTTAAATAGAA  750

seq1  TACCTGGTATGTAAGCATTCTTAAAGTAGGTAAGACTGTAGTTATAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGTATGTAAGCATTCTTAAAGTAGGTAAGACTGTAGTTATAATGT  800

seq1  TTGGATAAGCCTGGTC-TTAGTTTAGGCAATAAAGTACAATATATGTGGA  849
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGGATAAGCCTGGTCTTTAGTTTAGGCAATAAAGTACAATATATGTGGA  850

seq1  AGTAATGATCCCAGTTTTGGAAGTGGATATCCACTGCCTATGTTTGGAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGATCCCAGTTTTGGAAGTGGATATCCACTGCCTATGTTTGGAAT  900

seq1  GACAACCAATGGCAATAAGATGGGATAAGATGACAAACACTTGTCAGTCT  949
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAC-ACCAATGGCAATAAGATGGGATAAGATGACAAACACTTGTCAGTCT  949

seq1  TAGGTGCATGTACGTGTGTGCATG-----TATGTGTGTGTGTGTGTG  991
      || |||||||||||||||||||||       ||||||||||||||||
seq2  TA-GTGCATGTACGTGTGTGCATGATTGTGTTGTGTGTGTGTGTGTG  995