BAC Information

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BAC

Clone NameB6Ng01-039M11
Chromosome12 (Build37)
Map Location 102,648,646 - 102,649,276
singlet/doubletsinglet
Overlap gene4932415G16Rik
Upstream geneTtc7b, Rps6ka5, LOC100040123, 9030617O03Rik, EG667148, Gpr68, 0610010D24Rik, LOC100040184, Smek1, 4930463M05Rik, Mylf-ps
Downstream geneMtac2d1, Fbln5, Trip11, Atxn3, LOC100040305, LOC100040297, Cpsf2, Slc24a4, Rin3, Lgmn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-039M11.bB6Ng01-039M11.g
ACCDH866946DH866947
length631154
definitionDH866946|Mus musculus domesticus DNA, BAC clone: B6Ng01-039M11, 5' end.DH866947|Mus musculus domesticus DNA, BAC clone: B6Ng01-039M11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaaagtagcaaaatgacacacgttataaaatagtttggagg
aggtaacttgcagagtttgtgagggaagcagtgcatatttcagtctgaca
attcaaccatttggtaagactgagaactggtgtatatcacaggttcttgt
atatgaggcaaagggatattgatgtcaaactacaatccttgggaagctat
gcataccagtaatgatatccttacataggaaaatttgagaataactctga
aacaaccacattgtacaaaacatgttcaggataaaagatatttatcccta
cttcttaattaaatctaataaactaggtgggatagtgatataccatagct
ggaatttggatcaatatggaaacatggggtgagaaacactttttagggaa
aaaattattctgttatgttctgtggctgatgttcttaatctaacaaagga
taggccaacaagggaacaaaacatggatttcatttgatatcaatatttat
ggagcaatgaggtctttgagaaatcagtgaattcctaaagaagtggttaa
ttcaataagctagttaccataccaacaaaaaaagtaacaagttggggaga
tgggagaatagaaggaaagggggtttgggga
atcacacatatctaaacacgataaaagccatatatagcaaaccaacagcc
aacatcaaattaaatggagaaaaactacaagcaatcccactaaaaccagg
gacaagacaaggaggcagagggagggagggtcttggatgggaatgggagg
aggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_102648646_102649276
seq2: B6Ng01-039M11.b_48_678

seq1  GAATTCTTTAAAAGTAGCAAAATGACACACGTTATAAAATAGTTTGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAAGTAGCAAAATGACACACGTTATAAAATAGTTTGGAGG  50

seq1  AGGTAACTTGCAGAGTTTGTGAGGGAAGCAGTGCATATTTCAGTCTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACTTGCAGAGTTTGTGAGGGAAGCAGTGCATATTTCAGTCTGACA  100

seq1  ATTCAACCATTTGGTAAGACTGAGAACTGGTGTATATCACAGGTTCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACCATTTGGTAAGACTGAGAACTGGTGTATATCACAGGTTCTTGT  150

seq1  ATATGAGGCAAAGGGATATTGATGTCAAACTACAATCCTTGGGAAGCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGGCAAAGGGATATTGATGTCAAACTACAATCCTTGGGAAGCTAT  200

seq1  GCATACCAGTAATGATATCCTTACATAGGAAAATTTGAGAATAACTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACCAGTAATGATATCCTTACATAGGAAAATTTGAGAATAACTCTGA  250

seq1  AACAACCACATTGTACAAAACATGTTCAGGATAAAAGATATTTATCCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCACATTGTACAAAACATGTTCAGGATAAAAGATATTTATCCCTA  300

seq1  CTTCTTAATTAAATCTAATAAACTAGGTGGGATAGTGATATACCATAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAATTAAATCTAATAAACTAGGTGGGATAGTGATATACCATAGCT  350

seq1  GGAATTTGGATCAATATGGAAACATGGGGTGAGAAACACTTTTTAGGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTGGATCAATATGGAAACATGGGGTGAGAAACACTTTTTAGGGAA  400

seq1  AAAATTATTCTGTTATGTTCTGTGGCTGATGTTCTTAATCTAACAAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATTCTGTTATGTTCTGTGGCTGATGTTCTTAATCTAACAAAGGA  450

seq1  TAGGCCAACAAGGGAACAAAACATGGATTTCATTTGATATCAATATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCAACAAGGGAACAAAACATGGATTTCATTTGATATCAATATTTAT  500

seq1  GGAGCAATGAGGTCTTTGAGAAATCAGTGAATTCCTAAAGAAGTGGTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAATGAGGTCTTTGAGAAATCAGTGAATTCCTAAAGAAGTGGTTAA  550

seq1  TTCAATAAGCTAGTTACCATACCAACAAAAAAAGTAACAAGTTGGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAAGCTAGTTACCATACCAACAAAAAAAGTAACAAGTTGGGGAGA  600

seq1  TGGGAGAATAGAAGGAAAGGGGGTTTGGGGA  631
      |||||||||||||||||||||||||||||||
seq2  TGGGAGAATAGAAGGAAAGGGGGTTTGGGGA  631