BAC Information

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BAC

Clone NameB6Ng01-040K18
Chromosome12 (Build37)
Map Location 9,505,043 - 9,505,728
singlet/doubletsinglet
Overlap genenone
Upstream geneRhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32, LOC633030, LOC100042238
Downstream geneOsr1, LOC382567, Nt5c1b, Rdh14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040K18.bB6Ng01-040K18.g
ACCDH867561DH867562
length1,109689
definitionDH867561|Mus musculus domesticus DNA, BAC clone: B6Ng01-040K18, 5' end.DH867562|Mus musculus domesticus DNA, BAC clone: B6Ng01-040K18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctctttctagttcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatttctttaatttctttcttcagggacttgaagttttatcataca
gatctttcactccttcgtagagtcacgccgagatattttatattattgtg
ctattgagaaggtgttgtttccctaatttcttctcagccgttattcttgt
gtaaggaaggcatggactttgtttgagtaatttataatcagctacttacc
gagcctgctatcagttaggagatcctggtggaatttagggtcatctatat
accactcac
gaattcttcatgggagactgatgagagacagatgacagtaaaaagggcat
cagaaaccaaaaataaatgcggggtgtggatggagaagcagggcactctt
catgacggcagaaatttttcccttggaggtggccttcaggattccaagga
ggctgagtttggcaattctgtacaacagtgcaggtgacaggatgaactga
gagggacatggggaggagagtctccctcgttcccagatgtgtgacaggga
gttgtttggggtctgtgcgtgtgcagtatggtaggttttatttttatttt
accttattttctatgtgtttcggtgttttgcctgtctgtgcacagtgtat
gtgcctgacgcctgctgaagccagaagagggcatcctgttccctggagct
ggagttacagtgtttgctgccgtatgggtgctgagaattgaagccaggtc
ctctggaaaagcagacagtgttcctaactgctgagtcctctcttcagccc
tgtatgtgatcattttcccccatagaataagagacgtggagatgggcagt
ttggaaacagtgcagttcaaggaaatggctttatagttagaggttttatt
tatttatttatttatttatttattttccaaagtagcttttaccttgagat
gtgagcactgtgtttccaggtttgggggggggggagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_9505043_9505728
seq2: B6Ng01-040K18.g_69_756

seq1  GAATTCTTCATGGGAGACTGATGAGAGACAGATGACAGTAAAAAGGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATGGGAGACTGATGAGAGACAGATGACAGTAAAAAGGGCAT  50

seq1  CAGAAACCAAAAATAAATGCGGGGTGTGGATGGAGAAGCAGGGCACTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACCAAAAATAAATGCGGGGTGTGGATGGAGAAGCAGGGCACTCTT  100

seq1  CATGACGGCAGAAATTTTTCCCTTGGAGGTGGCCTTCAGGATTCCAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACGGCAGAAATTTTTCCCTTGGAGGTGGCCTTCAGGATTCCAAGGA  150

seq1  GGCTGAGTTTGGCAATTCTGTACAACAGTGCAGGTGACAGGATGAACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGTTTGGCAATTCTGTACAACAGTGCAGGTGACAGGATGAACTGA  200

seq1  GAGGGACATGGGGAGGAGAGTCTCCCTCGTTCCCAGATGTGTGACAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACATGGGGAGGAGAGTCTCCCTCGTTCCCAGATGTGTGACAGGGA  250

seq1  GTTGTTTGGGGTCTGTGCGTGTGCAGTATGGTAGGTTTTATTTTTATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGGGGTCTGTGCGTGTGCAGTATGGTAGGTTTTATTTTTATTTT  300

seq1  ACCTTATTTTCTATGTGTTTCGGTGTTTTGCCTGTCTGTGCACAGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATTTTCTATGTGTTTCGGTGTTTTGCCTGTCTGTGCACAGTGTAT  350

seq1  GTGCCTGACGCCTGCTGAAGCCAGAAGAGGGCATCCTGTTCCCTGGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGACGCCTGCTGAAGCCAGAAGAGGGCATCCTGTTCCCTGGAGCT  400

seq1  GGAGTTACAGTGTTTGCTGCCGTATGGGTGCTGAGAATTGAAGCCAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTACAGTGTTTGCTGCCGTATGGGTGCTGAGAATTGAAGCCAGGTC  450

seq1  CTCTGGAAAAGCAGACAGTGTTCCTAACTGCTGAGTCCTCTCTTCAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAAAAGCAGACAGTGTTCCTAACTGCTGAGTCCTCTCTTCAGCCC  500

seq1  TGTATGTGATCATTTTCCCCCATAGAATAAGAGACGTGGAGATGGGCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGATCATTTTCCCCCATAGAATAAGAGACGTGGAGATGGGCAGT  550

seq1  TTGGAAACAGTGCAGTTCAAGGAAATGGCTTTATAGTTAGAGGTTTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACAGTGCAGTTCAAGGAAATGGCTTTATAGTTAGAGGTTTTATT  600

seq1  TATTTATTTATTTATTTATTTATTTTCCAAAGTAGCTTTTACCTTGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTATTTATTTATTTATTTTCCAAAGTAGCTTTTACCTTGAGAT  650

seq1  GTGAGCACTGTG-TTCCAGG-TTGGGGGGGGGGGAGAA  686
      |||||||||||| ||||||| |||||||||||||||||
seq2  GTGAGCACTGTGTTTCCAGGTTTGGGGGGGGGGGAGAA  688