BAC Information

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BAC

Clone NameB6Ng01-041B16
Chromosome12 (Build37)
Map Location 43,503,160 - 43,504,195
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041B16.bB6Ng01-041B16.g
ACCDH867865DH867866
length1,1781,031
definitionDH867865|Mus musculus domesticus DNA, BAC clone: B6Ng01-041B16, 5' end.DH867866|Mus musculus domesticus DNA, BAC clone: B6Ng01-041B16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaacatcataaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggaggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatggatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgaatgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatgtaaggagttacagagacaaagtttggagctgagagga
aaggatggaccatgtagagactgccatatcctgggatccatcccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacaggcctcccaa
tggaggagctagagaaagtacccaggagctaatgggatctgcaaccctat
aggtggaacaacattatgaactaaccagttcccctgagctcttgattctt
agcttgcatatgtatcaaagatggctagtcgtccatcactggaaagagag
tccattgactgcaaacttatatgccccgatccggggaacgccagggccaa
atgggaagggtgtgggttagtggattac
gaattcttaaaaagctccttggaatatgctcaaggtacgcaatgtcctat
tctacaggtaggctggtcagcaattttcattgctgtcctatttaaattat
tcagaacattgaggtaacctgactgttcttccaaaatgagtggataacga
cagtgtgtacatatgtacaatggaatatgattaagctgtagagtaaaatc
aaataagaaaatgtgtaggcagattgatggatctagggaaagggataaca
tttgaaatgtaaataaaatatccaattaaaaaatggttattttgagagag
gtaacccagatacaaaaatacaaagctcacatgttctgtctcatctgttg
ttagctccagatcttcacatatgaatttagaacatcgagtttcactgaaa
caaggcatgcatcaagtatagagagcacgtaaataagaaatacgttcagg
gctgagttggatgttacagcgatgagcagttagctcaagtcagctgtaca
gagtagataagaatgaaatgatagctcatgatgtaatgctagagtgtgat
tggcaaaagtatggctgccccttgtaccaggcagacagagatcttgacgc
aacagtgaagaagatccttctgtcttgctctccaatcagcatgactactt
aatgtgctgcccttgctgagatccagaggaaggaggaagatccagaggaa
ggggccacagcctgcagcccacagcccgagacaggccaagcaacagattg
atctcaagctttgctttcgagtcctttgctgcttgcttctgaatcaggtc
cacatgcttgtgttatggactgatgcttgtcattgcattgaataaacctt
gagatcaaaccttatctggactctttcccttctaggccttaaaccgggtg
caaccactttcaacataaagagactttgcagaaaggtgaaggagaactgc
ttggggaatacaggatttaggtgaaaagaagtgaaaatactattgtggat
gctacagttgcttgctgacagagcctgataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43503160_43504195
seq2: B6Ng01-041B16.g_66_1096

seq1  GAATTCTTAAAAAGCTCCTTGGAATATGCTCAAGGTACGCAATGTCCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAAAGCTCCTTGGAATATGCTCAAGGTACGCAATGTCCTAT  50

seq1  TCTACAGGTAGGCTGGTCAGCAATTTTCATTGCTGTCCTATTTAAATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGGTAGGCTGGTCAGCAATTTTCATTGCTGTCCTATTTAAATTAT  100

seq1  TCAGAACATTGAGGTAACCTGACTGTTCTTCCAAAATGAGTGGATAACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACATTGAGGTAACCTGACTGTTCTTCCAAAATGAGTGGATAACGA  150

seq1  CAGTGTGTACATATGTACAATGGAATATGATTAAGCTGTAGAGTAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTACATATGTACAATGGAATATGATTAAGCTGTAGAGTAAAATC  200

seq1  AAATAAGAAAATGTGTAGGCAGATTGATGGATCTAGGGAAAGGGATAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAAAATGTGTAGGCAGATTGATGGATCTAGGGAAAGGGATAACA  250

seq1  TTTGAAATGTAAATAAAATATCCAATTAAAAAATGGTTATTTTGAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGTAAATAAAATATCCAATTAAAAAATGGTTATTTTGAGAGAG  300

seq1  GTAACCCAGATACAAAAATACAAAGCTCACATGTTCTGTCTCATCTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCAGATACAAAAATACAAAGCTCACATGTTCTGTCTCATCTGTTG  350

seq1  TTAGCTCCAGATCTTCACATATGAATTTAGAACATCGAGTTTCACTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCCAGATCTTCACATATGAATTTAGAACATCGAGTTTCACTGAAA  400

seq1  CAAGGCATGCATCAAGTATAGAGAGCACGTAAATAAGAAATACGTTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCATGCATCAAGTATAGAGAGCACGTAAATAAGAAATACGTTCAGG  450

seq1  GCTGAGTTGGATGTTACAGCGATGAGCAGTTAGCTCAAGTCAGCTGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTGGATGTTACAGCGATGAGCAGTTAGCTCAAGTCAGCTGTACA  500

seq1  GAGTAGATAAGAATGAAATGATAGCTCATGATGTAATGCTAGAGTGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGATAAGAATGAAATGATAGCTCATGATGTAATGCTAGAGTGTGAT  550

seq1  TGGCAAAAGTATGGCTGCCCCTTGTACCAGGCAGACAGAGATCTTGACGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAAGTATGGCTGCCCCTTGTACCAGGCAGACAGAGATCTTGACGC  600

seq1  AACAGTGAAGAAGATCCTTCTGTCTTGCTCTCCAATCAGCATGACTACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGAAGAAGATCCTTCTGTCTTGCTCTCCAATCAGCATGACTACTT  650

seq1  AATGTGCTGCCCTTGCTGAGATCCAGAGGAAGGAGGAAGATCCAGAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTGCCCTTGCTGAGATCCAGAGGAAGGAGGAAGATCCAGAGGAA  700

seq1  GGGGCCACAGCCTGCAGCCCACAGCCCGAGACAGGCCAAGCAACAGATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCACAGCCTGCAGCCCACAGCCCGAGACAGGCCAAGCAACAGATTG  750

seq1  ATCTCAAGCTTTGCTTTCGAGTCCTTTGCTGCTTGCTTCTGAATCAGGTT  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATCTCAAGCTTTGCTTTCGAGTCCTTTGCTGCTTGCTTCTGAATCAGG-T  799

seq1  CCACATGCTTGTGTTATGGACTGATGCTTGTCATTGCATTGAATAAACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGCTTGTGTTATGGACTGATGCTTGTCATTGCATTGAATAAACCT  849

seq1  TGAGATCAAACCATATCTGGACTC-TTCCCTTCTAGGCCTTAAACCGGGT  899
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  TGAGATCAAACCTTATCTGGACTCTTTCCCTTCTAGGCCTTAAACCGGGT  899

seq1  GCAACCACTTTCAACATAGAGAGACCTTTGCAGAAGGGTGAAGGAGACTT  949
      |||||||||||||||||| ||||| |||||||||| |||||||||||  |
seq2  GCAACCACTTTCAACATAAAGAGA-CTTTGCAGAAAGGTGAAGGAGAACT  948

seq1  GCTTGGGGAATAACAGGATTTAGGTGAAAAGAAGTGGAAAATACTATTGT  999
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  GCTTGGGGAAT-ACAGGATTTAGGTGAAAAGAAGT-GAAAATACTATTGT  996

seq1  GGATGCCAACAAGTGCTTGCTGACAGGAGCCTGATAA  1036
      ||||| | |||  |||||||||||| |||||||||||
seq2  GGATG-CTACAGTTGCTTGCTGACA-GAGCCTGATAA  1031