BAC Information

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BAC

Clone NameB6Ng01-041F07
Chromosome12 (Build37)
Map Location 93,627,300 - 93,758,960
singlet/doubletdoublet
Overlap genenone
Upstream geneTshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387, LOC100039425, LOC628116
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041F07.bB6Ng01-041F07.g
ACCDH868023DH868024
length844657
definitionDH868023|Mus musculus domesticus DNA, BAC clone: B6Ng01-041F07, 5' end.DH868024|Mus musculus domesticus DNA, BAC clone: B6Ng01-041F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,758,118 - 93,758,960)(93,627,300 - 93,627,955)
sequence
gaattcagccctaaatacagtaggttatctgttatgtggctgtgtgttca
gccatgccagacttgtgggaaataatggaaagggtttggtaactataaga
aagagaaaatgaattataaaatgtcagaacctgtctacttggagacagtc
tgggtaaagcagaatagtcacataaaccaatatttacaaggaacaataat
aaagtatttgtgagaatatataaaagaatgtgtaatgacaatgaaacttc
acccgagatgagcatagtgataattttaagtataaggggtcttgtttagt
taccatctcttcaactagaaaatacatagcaattttcattgtttgaaatt
ttgtatattcataaaataattttagtcattttctccccctcttccattat
cctttctcatcatcctttcttttccccttgaacccttctttcccaagtct
cctttataaactcagttcttttttaatggtaaattacagtttcttactca
agactttgaaatgtaaataaaggaaatatctaataaaaataatttttaac
ttctctccagtaatacttaatttgtttttaccttcctttgttacaaacaa
cttaaaaattagctacttcaggcatgtttctttgaataatctacctggcc
atttttatgcttctgagcaaagataatcaaacagaactttaaaaccaaac
aagcaatttaaaagcagtagaaaggtagttttaaaaatgacataaatgtg
gggatggaaatttcttgtggggttgaaagaattgaaggagaggatatttc
atatcatgaaatatatagtacttacataaacatatcatacaaaa
gaattcacaggtgggaaagaattttgaattagcattctcccagtgcagcc
tacaaagcacctttgggtacttgaaaactagccatcaggcggatgctagt
aggttagtagcatatttatttcttcatgtcacctgacctcagtgtgtgat
atcttcagccatagcgtcttaccatcaagttactaactctagttttgcaa
tttcttactcttcaccatcccttcacctgttatgcggatatatgtatact
tttattctacctctggcatatgaatcattgggtttccttaaagtatttat
ttcttatttcattatgtatttatataataaaatgaacagaggtgttgtgg
gcacatggatataatctcaggactgaggtatttgaggcaggaggatcact
agagttcaaaattcaagatgactctctgcaacatttcatggcttcacctc
aaaaagaaaaaaaaaggtgaaaggtaactatgttttctttttatgtgagt
ggtggagaaaacaaatcttgcttccagtgacataatttatataaagggca
tagctttgatccatatagatggcagtcaatagatgcaattttgtatgctc
atttctctgagtatctggagtatgggaaaggcatgtcagaggctaaaatt
ctgaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93758118_93758960
seq2: B6Ng01-041F07.b_45_888 (reverse)

seq1  TTTTGTAT-ATATGTTTATGTAAGTACTATAT-TTTCCTGATATTGAAAT  48
      |||||||| ||||||||||||||||||||||| |||| ||||| ||||||
seq2  TTTTGTATGATATGTTTATGTAAGTACTATATATTTCATGATA-TGAAAT  49

seq1  ATCCTCTTCCTTCAATTCTTTCAACCCCACAAGAAATTTCCAT-CCCACA  97
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  ATCCTC-TCCTTCAATTCTTTCAACCCCACAAGAAATTTCCATCCCCACA  98

seq1  TTTATGTCATTTTTAAAACTACCTTTCTACTGCTTTTAAATTTGCTTGTT  147
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTATGTCATTTTTAAAACTACCTTTCTACTGCTTTTAAA-TTGCTTGTT  147

seq1  TGGTTTTAAAGTTCTGTTTGATTATCTTTGCTCAGAAGCATAAAAATGGC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTAAAGTTCTGTTTGATTATCTTTGCTCAGAAGCATAAAAATGGC  197

seq1  CAGGTAGATTATTCAAAGAAACATGCCTGAAGTAGCTAATTTTTAAGTTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAGATTATTCAAAGAAACATGCCTGAAGTAGCTAATTTTTAAGTTG  247

seq1  TTTGTAACAAAGGAAGGTAAAAACAAATTAAGTATTACTGGAGAGAAGTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACAAAGGAAGGTAAAAACAAATTAAGTATTACTGGAGAGAAGTT  297

seq1  AAAAATTATTTTTATTAGATATTTCCTTTATTTACATTTCAAAGTCTTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTATTTTTATTAGATATTTCCTTTATTTACATTTCAAAGTCTTGA  347

seq1  GTAAGAAACTGTAATTTACCATTAAAAAAGAACTGAGTTTATAAAGGAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAACTGTAATTTACCATTAAAAAAGAACTGAGTTTATAAAGGAGA  397

seq1  CTTGGGAAAGAAGGGTTCAAGGGGAAAAGAAAGGATGATGAGAAAGGATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAAAGAAGGGTTCAAGGGGAAAAGAAAGGATGATGAGAAAGGATA  447

seq1  ATGGAAGAGGGGGAGAAAATGACTAAAATTATTTTATGAATATACAAAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGAGGGGGAGAAAATGACTAAAATTATTTTATGAATATACAAAAT  497

seq1  TTCAAACAATGAAAATTGCTATGTATTTTCTAGTTGAAGAGATGGTAACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAATGAAAATTGCTATGTATTTTCTAGTTGAAGAGATGGTAACT  547

seq1  AAACAAGACCCCTTATACTTAAAATTATCACTATGCTCATCTCGGGTGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGACCCCTTATACTTAAAATTATCACTATGCTCATCTCGGGTGAA  597

seq1  GTTTCATTGTCATTACACATTCTTTTATATATTCTCACAAATACTTTATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATTGTCATTACACATTCTTTTATATATTCTCACAAATACTTTATT  647

seq1  ATTGTTCCTTGTAAATATTGGTTTATGTGACTATTCTGCTTTACCCAGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCCTTGTAAATATTGGTTTATGTGACTATTCTGCTTTACCCAGAC  697

seq1  TGTCTCCAAGTAGACAGGTTCTGACATTTTATAATTCATTTTCTCTTTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAAGTAGACAGGTTCTGACATTTTATAATTCATTTTCTCTTTCT  747

seq1  TATAGTTACCAAACCCTTTCCATTATTTCCCACAAGTCTGGCATGGCTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTACCAAACCCTTTCCATTATTTCCCACAAGTCTGGCATGGCTGA  797

seq1  ACACACAGCCACATAACA-ATAACCTACTGTATTTAGGGCTGAATTC  843
      |||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACACACAGCCACATAACAGATAACCTACTGTATTTAGGGCTGAATTC  844

seq1: chr12_93627300_93627955
seq2: B6Ng01-041F07.g_73_728

seq1  GAATTCACAGGTGGGAAAGAATTTTGAATTAGCATTCTCCCAGTGCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGTGGGAAAGAATTTTGAATTAGCATTCTCCCAGTGCAGCC  50

seq1  TACAAAGCACCTTTGGGTACTTGAAAACTAGCCATCAGGCGGATGCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCACCTTTGGGTACTTGAAAACTAGCCATCAGGCGGATGCTAGT  100

seq1  AGGTTAGTAGCATATTTATTTCTTCATGTCACCTGACCTCAGTGTGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGTAGCATATTTATTTCTTCATGTCACCTGACCTCAGTGTGTGAT  150

seq1  ATCTTCAGCCATAGCGTCTTACCATCAAGTTACTAACTCTAGTTTTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGCCATAGCGTCTTACCATCAAGTTACTAACTCTAGTTTTGCAA  200

seq1  TTTCTTACTCTTCACCATCCCTTCACCTGTTATGCGGATATATGTATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTACTCTTCACCATCCCTTCACCTGTTATGCGGATATATGTATACT  250

seq1  TTTATTCTACCTCTGGCATATGAATCATTGGGTTTCCTTAAAGTATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTACCTCTGGCATATGAATCATTGGGTTTCCTTAAAGTATTTAT  300

seq1  TTCTTATTTCATTATGTATTTATATAATAAAATGAACAGAGGTGTTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTCATTATGTATTTATATAATAAAATGAACAGAGGTGTTGTGG  350

seq1  GCACATGGATATAATCTCAGGACTGAGGTATTTGAGGCAGGAGGATCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGGATATAATCTCAGGACTGAGGTATTTGAGGCAGGAGGATCACT  400

seq1  AGAGTTCAAAATTCAAGATGACTCTCTGCAACATTTCATGGCTTCACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCAAAATTCAAGATGACTCTCTGCAACATTTCATGGCTTCACCTC  450

seq1  AAAAAGAAAAAAAAAGGTGAAAGGTAACTATGTTTTCTTTTTATGTGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAAAAAGGTGAAAGGTAACTATGTTTTCTTTTTATGTGAGT  500

seq1  GGTGGAGAAAACAAATCTTGCTTCCAGTGACATAATTTATATAAAGGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGAAAACAAATCTTGCTTCCAGTGACATAATTTATATAAAGGGCA  550

seq1  TAGCTTTGATCCATATAGATGGCAGTCAATAGATGCAATTTTGTATGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTGATCCATATAGATGGCAGTCAATAGATGCAATTTTGTATGCTC  600

seq1  ATTTCTCTGAGTATCTGGAGTATGGGAAAGGCATGTCAGAGGCTAAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGAGTATCTGGAGTATGGGAAAGGCATGTCAGAGGCTAAAATT  650

seq1  CTGAAT  656
      ||||||
seq2  CTGAAT  656