BAC Information

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BAC

Clone NameB6Ng01-041J05
Chromosome12 (Build37)
Map Location 94,419,812 - 94,581,343
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039425, LOC628116
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041J05.bB6Ng01-041J05.g
ACCDH868198DH868199
length927673
definitionDH868198|Mus musculus domesticus DNA, BAC clone: B6Ng01-041J05, 5' end.DH868199|Mus musculus domesticus DNA, BAC clone: B6Ng01-041J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,580,420 - 94,581,343)(94,419,812 - 94,420,483)
sequence
gaattccagcattagctattcttacttagcggtttccttttcttacaaat
gcaccaaataagagcaggtaaggtcttggaaaggtagagacactgctcag
tgactcatatacgttttatggctgtgtacaccaggactcagctctgtgtg
tgtaccctcacctctgtttgggaaaattctctacatctgtctcgcataca
ccatgtcgtcttagtactcacaggtgttttgcctgtatacagaagggaaa
atatatctatttgtaggtctcacattctacaatgtttcactatgaatatg
cagagagctaattttatctctcattataaaacatatttttgttttaaatt
tacatactatttttcatatttgtggagcggtgtgtgactattcaatacat
atatacaatgtataattatagaaaataaaaaaaaacacatttttttagta
cttaccatttttgtctggaacatcatgatttcactcttctcatttctcat
aagctatatgtagcttcatatttcattccactggaaaggaaatctattta
ttattcttttatgtaactgcaaaattttatgcagtaactaatctctcccc
aacaacttttgtgtatcaagtaaaaactacttgtatactctaggtttgag
atcacagttctatcttcctcatatgaggaagagaggcatttatctttgtg
tcttacctcactcataatgctgaatttgtagtaaaactttactagacaaa
taaatgtatgtgtggaattgtaattatttagatattagaattcataaaat
ttgaataaaggcttttgcttagtagctacttttaatatagcattatcctg
aagtgtactttacatatttaagagagtaaccatactatcagcacatttaa
ggtaatgacatgcttccagagcctagt
gaattctaatgtactaaaccataaaatatcacttaaaaaaaaatcacttc
ttgatacctttgctttaacgctagtttctgaacagttttctttatctcac
tattgaaatgattttattaaaataatattacagatgattgttttcagctc
tgacttaattgatcatttttgtcacggctgagtttaaaattaggccactg
agattaataaagtaagcaaattcttcgtgtaggttataaactagtacagt
caggaagtagggcaggccagtaatcccaatccttaaggaactaatgtagt
aggttaatctgggccagaaggtgaggctctcaagatctgataagaagtca
ttcatcaattaataaaatacataattaactgtgtttagcacctattttaa
tatagatgtatacactcgaacacataactatgcttctttatatcttaaat
cgtgacatgaactgtggtctgtctttaagagaagatcaaatgttcatctg
atgatcaagcttaaatactaaaaaatgatgattttcatttcaaaaccctg
gggccatttcataatagtctttaaaattcaaatttgggacatagttaatg
tcttttttttttttttttggtactacaacatactttaatgtctgtccttc
attgtctccctctccctcccacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94580420_94581343
seq2: B6Ng01-041J05.b_44_970 (reverse)

seq1  ACTAGGCTCTGGAAGCATGTCATTACCTTAAATGTGCTGATAGTATGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCTCTGGAAGCATGTCATTACCTTAAATGTGCTGATAGTATGGTT  50

seq1  ACTCTCTTAAATATGTAAAGTACACTTCAGGATAATGCTATATT-AAAGT  99
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTCTCTTAAATATGTAAAGTACACTTCAGGATAATGCTATATTAAAAGT  100

seq1  AGCTACTAAGCAAAAGCCTTTATTCAAATTTTATGAATTCTAATATCTAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTAAGCAAAAGCCTTTATTCAAATTTTATGAATTCTAATATCTAA  150

seq1  ATAATTACAATTCCACACATACATTTATTTGTCTAGTAAAGTTTTACTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTACAATTCCACACATACATTTATTTGTCTAGTAAAGTTTTACTAC  200

seq1  AAATTCAGCATTATGAGTGAGGTAAGACACAAAGATAAATGCCTCTCTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGCATTATGAGTGAGGTAAGACACAAAGATAAATGCCTCTCTTC  250

seq1  CTCATATGAGGAAGATAGAACTGTGATCTCAAACCTAGAGTATACAAGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATGAGGAAGATAGAACTGTGATCTCAAACCTAGAGTATACAAGTA  300

seq1  GTTTTTACTTGATACAC-AAAGTTGTTGGGGAGAGATTAGTTACTGCATA  348
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTTTTACTTGATACACAAAAGTTGTTGGGGAGAGATTAGTTACTGCATA  350

seq1  AAATTTTGCAGTTACATAAAAGAATAATAAATAGATTTCCTTTCCAGTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTGCAGTTACATAAAAGAATAATAAATAGATTTCCTTTCCAGTGG  400

seq1  AATGAAATATGAAGCTACATATAGCTTATGAGAAATGAGAAGAGTGAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATATGAAGCTACATATAGCTTATGAGAAATGAGAAGAGTGAAAT  450

seq1  CATGATGTTCCAGACAAAAATGGTAAGTACTAAAAAAATGTGTTTTTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTTCCAGACAAAAATGGTAAGTACTAAAAAAATGTGTTTTTTTT  500

seq1  TATTTTCTATAATTATACATTGTATATATGTATTGAATAGTCACACACCG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTATAATTATACATTGTATATATGTATTGAATAGTCACACACCG  550

seq1  CTCCACAAATATGAAAAATAGTATGTAAATTTAAAACAAAAATATGTTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAATATGAAAAATAGTATGTAAATTTAAAACAAAAATATGTTTT  600

seq1  ATAATGAGAGATAAAATTAGCTCTCTGCATATTCATAGTGAAACATTGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGAGATAAAATTAGCTCTCTGCATATTCATAGTGAAACATTGTA  650

seq1  GAATGTGAGACCTACAAATAGATATATTTTCCCTTCTGTATACAGGCAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGAGACCTACAAATAGATATATTTTCCCTTCTGTATACAGGCAAA  700

seq1  ACACCTGTGAGTACTAAGACGACATGGTGTATGCGAGACAGATGTAGAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGTGAGTACTAAGACGACATGGTGTATGCGAGACAGATGTAGAGA  750

seq1  ATTTTCCCAAACAGAGGTGAGGGTACACACACAGAGCTGAGTCCTGGTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCAAACAGAGGTGAGGGTACACACACAGAGCTGAGTCCTGGTGT  800

seq1  ACACAGCCATAAAACGTATATGAGTCACTGAGCAGTGTCTCTACCTTTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCCATAAAACGTATATGAGTCACTGAGCAGTGTCTCTACCTTTCC  850

seq1  AAGACCTTACCTGCTCTTATTTGGTGCATTTGTAAGAAAAGGAATCC-CT  897
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  AAGACCTTACCTGCTCTTATTTGGTGCATTTGTAAGAAAAGGAAACCGCT  900

seq1  AAGTAAGAATAGCTAATGCTGGAATTC  924
      |||||||||||||||||||||||||||
seq2  AAGTAAGAATAGCTAATGCTGGAATTC  927

seq1: chr12_94419812_94420483
seq2: B6Ng01-041J05.g_68_740

seq1  GAATTCTAATGTACTAAACCATAAAATATCACTTAAAAAAAAATCACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGTACTAAACCATAAAATATCACTTAAAAAAAAATCACTTC  50

seq1  TTGATACCTTTGCTTTAACGCTAGTTTCTGAACAGTTTTCTTTATCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACCTTTGCTTTAACGCTAGTTTCTGAACAGTTTTCTTTATCTCAC  100

seq1  TATTGAAATGATTTTATTAAAATAATATTACAGATGATTGTTTTCAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAATGATTTTATTAAAATAATATTACAGATGATTGTTTTCAGCTC  150

seq1  TGACTTAATTGATCATTTTTGTCACGGCTGAGTTTAAAATTAGGCCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAATTGATCATTTTTGTCACGGCTGAGTTTAAAATTAGGCCACTG  200

seq1  AGATTAATAAAGTAAGCAAATTCTTCGTGTAGGTTATAAACTAGTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAATAAAGTAAGCAAATTCTTCGTGTAGGTTATAAACTAGTACAGT  250

seq1  CAGGAAGTAGGGCAGGCCAGTAATCCCAATCCTTAAGGAACTAATGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTAGGGCAGGCCAGTAATCCCAATCCTTAAGGAACTAATGTAGT  300

seq1  AGGTTAATCTGGGCCAGAAGGTGAGGCTCTCAAGATCTGATAAGAAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAATCTGGGCCAGAAGGTGAGGCTCTCAAGATCTGATAAGAAGTCA  350

seq1  TTCATCAATTAATAAAATACATAATTAACTGTGTTTAGCACCTATTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAATTAATAAAATACATAATTAACTGTGTTTAGCACCTATTTTAA  400

seq1  TATAGATGTATACACTCGAACACATAACTATGCTTCTTTATATCTTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATGTATACACTCGAACACATAACTATGCTTCTTTATATCTTAAAT  450

seq1  CGTGACATGAACTGTGGTCTGTCTTTAAGAGAAGATCAAATGTTCATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGACATGAACTGTGGTCTGTCTTTAAGAGAAGATCAAATGTTCATCTG  500

seq1  ATGATCAAGCTTAAATACTAAAAAATGATGATTTTCATTTCAAAACCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAAGCTTAAATACTAAAAAATGATGATTTTCATTTCAAAACCCTG  550

seq1  GGGCCATTTCATAATAGTCTTTAAAATTCAAATTTGGGACATAGTTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATTTCATAATAGTCTTTAAAATTCAAATTTGGGACATAGTTAATG  600

seq1  TCTTTTTTTTTTTTTTTTGGTACTACAACATAC-TTAATGTCTGTCCTTC  649
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTTTTTTTTTTTTTTTTGGTACTACAACATACTTTAATGTCTGTCCTTC  650

seq1  ATTGTCTCCCTCTCCCTCCCCCC  672
      |||||||||||||||||||| ||
seq2  ATTGTCTCCCTCTCCCTCCCACC  673