MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-044H07
Chromosome	12 (Build37)
Map Location	35,879,993 - 35,880,593
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Hdac9, 4921508M14Rik, Prps1l1, Snx13
Downstream gene	Ahr, LOC100043575, LOC629758, LOC100043579, LOC669866, Agr3, Agr2, Tspan13, EG432649, Bzw2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Hdac9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79221 MGI:1931221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921508M14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70844 MGI:1918094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Prps1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75456 MGI:1922706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Snx13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217463 MGI:2661416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ahr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11622 MGI:105043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043575 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043575
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC629758 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629758
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC100043579 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043579
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins pseudo : _no_value

name	LOC669866 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Agr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:403205 MGI:2685734
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23795 MGI:1344405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tspan13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66109 MGI:1913359
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432649 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432649 MGI:3646221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Bzw2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66912 MGI:1914162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hdac9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778860 GeneID:79221 MGI:1931221
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histone deacetylase 9 transcript_id : NM_024124.2

name	4921508M14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262921 GeneID:70844 MGI:1918094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4921508M14 gene transcript_id : XM_001480797.1

name	Prps1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803280 GeneID:75456 MGI:1922706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoribosyl pyrophosphate synthetase 1-like 1 transcript_id : NM_029294.2

name	Snx13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62510082 GeneID:217463 MGI:2661416
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 13 transcript_id : NM_001014973.1

name	Ahr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369296 GeneID:11622 MGI:105043
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aryl-hydrocarbon receptor transcript_id : NM_013464.4

name	LOC100043575 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262923 GeneID:100043575
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043575 transcript_id : XM_001480800.1

name	Agr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372561 GeneID:403205 MGI:2685734
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anterior gradient homolog 3 (Xenopus laevis) transcript_id : NM_207531.2

name	Agr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130044 GeneID:23795 MGI:1344405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anterior gradient 2 (Xenopus laevis) transcript_id : NM_011783.2

name	Tspan13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130350 GeneID:66109 MGI:1913359
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetraspanin 13 transcript_id : NM_025359.3

name	Bzw2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981159 GeneID:66912 MGI:1914162
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : basic leucine zipper and W2 domains 2 transcript_id : NM_025840.2

name	Hdac9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70778861 GeneID:79221 MGI:1931221
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0000118 - histone deacetylase complex [Evidence TAS]; GO:0005634 - nucleus [Evidence TAS] [Evidence IDA] GO_function : GO:0004407 - histone deacetylase activity [Evidence TAS] [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016566 - specific transcriptional repressor activity [Evidence TAS]; GO:0003714 - transcription corepressor activity [Evidence IDA]; GO:0008134 - transcription factor binding [Evidence TAS]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0030183 - B cell differentiation [Evidence TAS]; GO:0016568 - chromatin modification [Evidence TAS] [Evidence IEA]; GO:0007507 - heart development [Evidence IGI]; GO:0006954 - inflammatory response [Evidence TAS]; GO:0045843 - negative regulation of striated muscle development [Evidence TAS]; GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0007399 - nervous system development [Evidence TAS]; GO:0000074 - regulation of progression through cell cycle [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : histone deacetylase 7B; MEF2-interacting transcription repressor product : histone deacetylase 9 protein_id : NP_077038.2

name	4921508M14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262922 GeneID:70844 MGI:1918094
definition	codon_start : 1 product : hypothetical protein LOC70844 protein_id : XP_001480847.1

name	Prps1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794182 GeneID:75456 MGI:1922706
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : phosphoribosyl pyrophosphate synthetase 1-like 1 protein_id : NP_083570.1

name	Snx13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62510083 GeneID:217463 MGI:2661416
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : sorting nexin 13 protein_id : NP_001014973.1

name	Ahr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304873 GeneID:11622 MGI:105043
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence TAS] [Evidence ISS]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0007049 - cell cycle [Evidence IDA] [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence ISS] [Evidence IDA]; GO:0006950 - response to stress [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA]; GO:0006805 - xenobiotic metabolism [Evidence TAS] codon_start : 1 note : dioxin receptor; aryl hydrocarbon receptor product : aryl-hydrocarbon receptor protein_id : NP_038492.1

name	LOC100043575 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262924 GeneID:100043575
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480850.1

name	Agr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430522 CCDS:CCDS25880.1 GeneID:403205 MGI:2685734
definition	codon_start : 1 exception : mismatches in translation product : anterior gradient homolog 3 protein_id : NP_997414.1

name	Agr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753010 CCDS:CCDS25881.1 GeneID:23795 MGI:1344405
definition	codon_start : 1 note : anterior gradient 2 homolog product : anterior gradient 2 protein_id : NP_035913.1

name	Tspan13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384722 CCDS:CCDS25882.1 GeneID:66109 MGI:1913359
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : transmembrane 4 superfamily member 13 product : tetraspanin 13 protein_id : NP_079635.1

name	Bzw2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981160 CCDS:CCDS25884.1 GeneID:66912 MGI:1914162
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : basic leucine zipper and W2 domains 2 protein_id : NP_080116.2

name	LOC629758 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629758
definition	number : 1 pseudo : _no_value

name	LOC100043579 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043579
definition	number : 1 pseudo : _no_value

name	LOC669866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669866
definition	number : 2 pseudo : _no_value

name	LOC669866 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669866
definition	number : 1 pseudo : _no_value

name	EG432649 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262770 GeneID:432649 MGI:3646221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG432649 pseudo : _no_value transcript_id : XR_035089.1

clone name	MSMg01-383E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140P05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236A18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161P19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-368G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129M12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-125D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018M18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-044H07.b	B6Ng01-044H07.g
ACC	DH870202	DH870203
length	601	881
definition	DH870202\|Mus musculus domesticus DNA, BAC clone: B6Ng01-044H07, 5' end.	DH870203\|Mus musculus domesticus DNA, BAC clone: B6Ng01-044H07, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcactcagacaaccggatccttctaaggcaaagcttttattgcttc aacataaggaagaccccgaacccggaaaatggtgctggttatatagccct cagcgtgatgtttcagcacctgatgtggcatgacagcacctgattagctc gcccatcaccccattactacaccccaagatgggcagtgactgggtgtgaa ttcattcttgcacttgagcataaggcttgtttactagttaggtgccagca ccatcttataatggcgattgctcacggcacggctctccacaagacagcat tatacctagaataagaaggtcactgtgtgaaattgcttctgcttgcactc cttaaagcaagatcagtggtagtaagggtttttattgctgtgaagagaca ccgtggccttgacaacacttataaagggaaacatttaattggggctggct taccattcagagctttagtctattaccatgatggtgggaagtatggtagc atgtaggcggacatggtgctggagaaggagccaagagttctacacctgga tcatcaggcagcagaaagagagaaggggtgggggagagaaggagagggag a	gaattcctaaacagccagggctacaaggcgaaaccctgtctcaagaaaga aaagaataagttagtaagaaggaaatgtgtactaagactgggtttttcca gctcattgattcctaatttttgtgcctggtgacagtgatgttgagcagtg gagatgcagatgtcaggcattttgccacactgctggttgggcagctgagc acaattattcattaccattagttactgctaaggagtttcccattcaagtt gggtcaagatgttctggcaggctacccttttcctgggaaaattgtttcct aatttctaaggctcttacatcaagaatattaatgaaggggaatactgtga tacatgtgtggtatttgcttaaacatttgttagatgcctgtactggctgg ttttgcatgtcaacctgacataagctggaatcatcagaggaaaaagcctc cattgaggaaaggtccctatgagatcgaactgtaaggcaatttctcagtt cgtgatcaatgggggagggcccagcccacagtggccactcctgggaaggt gatgctgggttttataagaaagcaggataagcaaaccaggggaagcaagc caataaagagcactcctccatggcctctgcatcagctccttcctgcaggt ttctgccctgcttgagctccagtcttgactttctttgatgatgagcatca atatggaaacgtaagccaaataaactctttcctcctcaacttgcttgttg gtcatacactgaagcaatagaaaccgtgattaagacaatgccctctttaa ataaaagaaaggaaggaaagaggaagaatgaaggaagaaggaaggaagga agaaggaaggaagaaggaggaaggaagaaga
quality values	Open. Hide. 47 42 25 32 61 23 14 53 61 43 38 43 61 61 24 61 61 61 61 61 43 47 61 61 61 61 36 31 24 28 24 40 20 19 19 26 20 43 61 61 61 61 59 61 61 59 61 61 61 59 43 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 52 55 55 44 44 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 55 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 61 61 61 38 43 12 18 12 11 16 12 11 11 27 28 49 15 28 24 14 23 18 18 23 41 19 18 12 13 11 11 17 55 49 47 52 39 28 32 24 25 11 37 20 28 37 28 37 28 55 33 55 55 52 52 28 49 47 38 32 49 43 35 20 55 37 37 19 34 25 17 49 26 27 23 43 14 41 13 32 31 19 41 37 31 26 43 37 29 37 49 50 29 37 18 36 35 11 29 49 21 37 10 14 11 25 9 19	Open. Hide. 61 61 59 59 59 61 28 25 23 18 18 21 11 18 18 17 24 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 59 61 59 55 59 59 44 35 49 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 59 59 59 59 37 55 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 55 61 61 61 55 52 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 61 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 47 61 61 53 61 61 61 61 53 61 61 61 53 61 61 61 61 53 61 61 61 61 61 61 61 61 61 47 39 41 27 61 61 39 61 61 61 61 61 61 61 61 61 61 45 53 50 61 53 61 61 61 61 50 53 53 57 53 40 57 57 53 57 57 53 53 53 47 53 53 57 57 57 57 57 53 53 53 53 53 45 53 50 53 57 53 57 57 52 57 53 53 53 53 53 53 47 47 42 53 42 50 53 53 34 53 53 53 52 57 50 33 38 52 47 53 53 52 53 47 47 53 52 53 52 52 37 52 29 34 38 52 52 52 52 43 50 53 53 53 53 43 43 57 53 53 35 53 50 53 38 27 52 41 47 53 52 52 50 42 53 57 50 37 39 57 57 52 50 39 37 52 28 41 57 38 50 33 38 41 30 52 50 52 40 57 34 31 53 40 41 32 33 46 53 28 52 25 16 46 36 40 37 57 36 42 52 33 21 57 40 42 40 37 40 52 41 35 31 41 40 22 6 19 33 53 37 53 16 39 43 31 27 48 32 32 33 44 35 41 47 40 37 57 24 30 27 27 32 48 30 46 46 32 17 45 30 29 43 29 34 29 18 33 23 31 17 26 27 31 33 27 45 28 23 25 29 51 34 27 45 36 30 28 51 48 33 11 37 37 32 24 31 29 17 7 13 17 14 23 23 30 10 31 27 6 8 8 8 4 19 28 23 11 32 24 8 10 7 18 17 30 24 14 7 17 30 22 17 32 22 6 6 8 10 9 18 24 17 14 23 16 10 7 17 7 6 8 18 7 20 22 10 7 16 16 7 9 12 6 6 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr12_35879993_35880593
seq2: B6Ng01-044H07.b_43_643

seq1  GAATTCACTCAGACAACCGGATCCTTCTAAGGCAAAGCTTTTATTGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGACAACCGGATCCTTCTAAGGCAAAGCTTTTATTGCTTC  50

seq1  AACATAAGGAAGACCCCGAACCCGGAAAATGGTGCTGGTTATATAGCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGGAAGACCCCGAACCCGGAAAATGGTGCTGGTTATATAGCCCT  100

seq1  CAGCGTGATGTTTCAGCACCTGATGTGGCATGACAGCACCTGATTAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGATGTTTCAGCACCTGATGTGGCATGACAGCACCTGATTAGCTC  150

seq1  GCCCATCACCCCATTACTACACCCCAAGATGGGCAGTGACTGGGTGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCACCCCATTACTACACCCCAAGATGGGCAGTGACTGGGTGTGAA  200

seq1  TTCATTCTTGCACTTGAGCATAAGGCTTGTTTACTAGTTAGGTGCCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTTGCACTTGAGCATAAGGCTTGTTTACTAGTTAGGTGCCAGCA  250

seq1  CCATCTTATAATGGCGATTGCTCACGGCACGGCTCTCCACAAGACAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTATAATGGCGATTGCTCACGGCACGGCTCTCCACAAGACAGCAT  300

seq1  TATACCTAGAATAAGAAGGTCACTGTGTGAAATTGCTTCTGCTTGCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTAGAATAAGAAGGTCACTGTGTGAAATTGCTTCTGCTTGCACTC  350

seq1  CTTAAAGCAAGATCAGTGGTAGTAAGGGTTTTTATTGCTGTGAAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCAAGATCAGTGGTAGTAAGGGTTTTTATTGCTGTGAAGAGACA  400

seq1  CCGTGGCCTTGACAACACTTATAAAGGGAAACATTTAATTGGGGCTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGCCTTGACAACACTTATAAAGGGAAACATTTAATTGGGGCTGGCT  450

seq1  TACCATTCAGAGCTTTAGTCTATTACCATGATGGTGGGAAGTATGGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTCAGAGCTTTAGTCTATTACCATGATGGTGGGAAGTATGGTAGC  500

seq1  ATGTAGGCAGACATGGTGCTGGAGAAGGAGCCAAGAGTTCTACACCTGGA  550
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGCGGACATGGTGCTGGAGAAGGAGCCAAGAGTTCTACACCTGGA  550

seq1  TCATCAGGCAGCAGAAAGAGAGAAGGGGTGGGGGAGAGAAGGAGAGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGGCAGCAGAAAGAGAGAAGGGGTGGGGGAGAGAAGGAGAGGGAG  600

seq1  A  601
      |
seq2  A  601

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information