BAC Information

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BAC

Clone NameB6Ng01-044M06
Chromosome12 (Build37)
Map Location 64,756,061 - 64,757,208
singlet/doubletsinglet
Overlap genenone
Upstream gene1700047L15Rik, Tspyl-ps, EG665741, EG382606
Downstream geneLOC435302, EG623046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044M06.bB6Ng01-044M06.g
ACCDH870428DH870429
length1,2581,132
definitionDH870428|Mus musculus domesticus DNA, BAC clone: B6Ng01-044M06, 5' end.DH870429|Mus musculus domesticus DNA, BAC clone: B6Ng01-044M06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaaacctgataaacagcttcagtgaagtagctggatataaaat
taactcaaacaagtcaatggcctttctctacacaaaggacaaacaggttg
agaaagaaattagggaaacaacacccttctcaatagccacaaataatata
aaataccttggtgtgactctaactaaggaagagaaaactctgtatgataa
gaccttcaagtctctgaagaaagaaattaaagaagatctcagaagatgga
aagatctcccatgctcatggattggcaggatcaatatagtaaaaatggct
atcttgccaaaagcaatctacagattcaatgcaatcaccatgaaaattcc
aactcaattcttcaacgaattagaaacagctatctgcaaattcatctgga
ataacaaaacacctaggatagcaaaaattcttttcaaggataaaagaacc
tctggtggaatcacaatgcctgacctaaagctgtactacagagcaattgt
gataaaaagggcatggtactggaatagcgacagacaagtagaccaatgga
atagaattgaagacccagaaatgaacccacacacctatggtcacttgatc
tttgacaagggagcaaaaaccatccagtggaaaagagacaggattttcaa
caaatggtgctggcacaagtggtggttatcatgtagaagaattcaaattg
atccattcctatctaattgtactaatgtcaaatctaagtggattaaggaa
ctcctctcaaaatcagagacactgaaactcatagaggagaaagcagggaa
aagcctagaagatatgggtacaggagaaaaattcctgaatagaacagcaa
tggcttgtgctgtaagatctagaatcgacaaaaagacctcataaaattgc
aaagcttctgtaaggtcaaagacaccatcaatagacaaaaaggccaccaa
cagattggaaaaatctttcctatcctaaatcagatagggactaatattca
tatatataaagactcagagtagactccagtgaacaaataaccccaataaa
atgggctcagactaacaaagaatttcacttgaggaatacgaatgctgaaa
ggcactaacaaatgtcaacatctatcatcagatgcaatcaaacaactgaa
atcatctcaccagtcgaatgcctagaatctaaatcaggtaacaagtgctg
catgagttggaaaaaaacctcctccacattgtgtgtgggatatcaccctt
gtctagac
gaattccttgtactatgtgctgctagcttttattataagagctggctact
gattataaatcaataacgtgggatgagggtttataaatcttgtagcttcc
taagaaactacataataatatatcacataataatttattatatacaatgt
atttcaaatacaaattaataatattgtataatttatcatatgttttacta
atattattctattataataaattatatattgttttaatagataacatatt
gaatatcacatcgcataattttatataaaaacatatttttaattagaaaa
tattttaggaataaatattctaggactatatgttatatatgaaatacata
aataaattataatataatgatatattttatattcattcatgtatattaat
actgtattatattgatgacaatcaatatcatacatacataattaaaaaca
attgattatatcgatattgcccgaacatgaggtggacaatgcaaatgcct
gagtaaataggcaaagcccatgagtcctcagtcccacacaaacaagtaca
attaaggactgctgggatgggaaatgtagcattatactagggaagaacac
atgaaatatttgtctactgtatattttttcatggtgctctggttccttgt
cttacccattatttcttcccctctcccctctgtgcttattgacatgtagg
aaaaagtttcatcttattttgttgatctacttttatgtatttatttattt
atctacttatttgatagtttgattagtgtttgtttgttacattctttcct
tattttatcattttgagacagggtttctctgtgtagctctggctgtcctg
gaactctttttgtaaatcaggttgtcctggaactcaatgatgtttctgac
tctgcctcctgaaacagattagtggtacatacatctcctgagatctggat
taacggtatgtaccactatcaccctgttgaaaaaattcatgatacttata
agcttgtttaacaaaagaggcttctcattaaacaaatacatattgtctct
tattctaaagcatggtatcatttgatctaaatatatatgaatttcccaaa
acttccttttgtagcatgacaattttgcgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64756061_64757208
seq2: B6Ng01-044M06.g_67_1198 (reverse)

seq1  TTTCGCAAAATTTTTGGTTCATGCTACAGAAGGAATTTTTTGGGGAAATT  50
      ||||||||||||      |||||||||| |||||| ||||  ||||||||
seq2  TTTCGCAAAATT-----GTCATGCTACAAAAGGAAGTTTT--GGGAAATT  43

seq1  CATTATATATTATAGATACAAATGATACCATGCTTTAGAATAAGAGACAA  100
      || |||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  CA-TATATATT-TAGAT-CAAATGATACCATGCTTTAGAATAAGAGACAA  90

seq1  TATGTTATTTGTTTTAATGAGAAGCCTCTTTTGTTAAACAAGCTTTATAA  150
      |||| |||||| ||||||||||||||||||||||||||||||| ||||||
seq2  TATG-TATTTG-TTTAATGAGAAGCCTCTTTTGTTAAACAAGC-TTATAA  137

seq1  GTATCATGAATTTTTTTCAACAGGGTGATAGTGGTACATACCGTTAATTC  200
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  GTATCATGAA-TTTTTTCAACAGGGTGATAGTGGTACATACCGTTAA-TC  185

seq1  CAGATCTCAGGAGATTGTATGTACCACTAATCTGTTTCAGGAGGCAGAGT  250
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGATCTCAGGAGA-TGTATGTACCACTAATCTGTTTCAGGAGGCAGAGT  234

seq1  CAGAAACATCATTGAGTTCCAGGACAACCTGATTTACAAAAAGAGTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACATCATTGAGTTCCAGGACAACCTGATTTACAAAAAGAGTTCCA  284

seq1  GGACAGCCAGAGCTACACAGAGAAACCCTGTCTCAAAATGATAAAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAGAGCTACACAGAGAAACCCTGTCTCAAAATGATAAAATAAG  334

seq1  GAAAGAATGTAACAAACAAACACTAATCAAACTATCAAATAAGTAGATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGTAACAAACAAACACTAATCAAACTATCAAATAAGTAGATAA  384

seq1  ATAAATAAATACATAAAAGTAGATCAACAAAATAAGATGAAACTTTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATACATAAAAGTAGATCAACAAAATAAGATGAAACTTTTTCC  434

seq1  TACATGTCAATAAGCACAGAGGGGAGAGGGGAAGAAATAATGGGTAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTCAATAAGCACAGAGGGGAGAGGGGAAGAAATAATGGGTAAGAC  484

seq1  AAGGAACCAGAGCACCATGAAAAAATATACAGTAGACAAATATTTCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACCAGAGCACCATGAAAAAATATACAGTAGACAAATATTTCATGT  534

seq1  GTTCTTCCCTAGTATAATGCTACATTTCCCATCCCAGCAGTCCTTAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCCCTAGTATAATGCTACATTTCCCATCCCAGCAGTCCTTAATTG  584

seq1  TACTTGTTTGTGTGGGACTGAGGACTCATGGGCTTTGCCTATTTACTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTTTGTGTGGGACTGAGGACTCATGGGCTTTGCCTATTTACTCAG  634

seq1  GCATTTGCATTGTCCACCTCATGTTCGGGCAATATCGATATAATCAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGCATTGTCCACCTCATGTTCGGGCAATATCGATATAATCAATTG  684

seq1  TTTTTAATTATGTATGTATGATATTGATTGTCATCAATATAATACAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTATGTATGTATGATATTGATTGTCATCAATATAATACAGTAT  734

seq1  TAATATACATGAATGAATATAAAATATATCATTATATTATAATTTATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATACATGAATGAATATAAAATATATCATTATATTATAATTTATTTA  784

seq1  TGTATTTCATATATAACATATAGTCCTAGAATATTTATTCCTAAAATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCATATATAACATATAGTCCTAGAATATTTATTCCTAAAATATT  834

seq1  TTCTAATTAAAAATATGTTTTTATATAAAATTATGCGATGTGATATTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTAAAAATATGTTTTTATATAAAATTATGCGATGTGATATTCAA  884

seq1  TATGTTATCTATTAAAACAATATATAATTTATTATAATAGAATAATATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTATCTATTAAAACAATATATAATTTATTATAATAGAATAATATTA  934

seq1  GTAAAACATATGATAAATTATACAATATTATTAATTTGTATTTGAAATAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACATATGATAAATTATACAATATTATTAATTTGTATTTGAAATAC  984

seq1  ATTGTATATAATAAATTATTATGTGATATATTATTATGTAGTTTCTTAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATATAATAAATTATTATGTGATATATTATTATGTAGTTTCTTAGG  1034

seq1  AAGCTACAAGATTTATAAACCCTCATCCCACGTTATTGATTTATAATCAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACAAGATTTATAAACCCTCATCCCACGTTATTGATTTATAATCAG  1084

seq1  TAGCCAGCTCTTATAATAAAAGCTAGCAGCACATAGTACAAGGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGCTCTTATAATAAAAGCTAGCAGCACATAGTACAAGGAATTC  1132