BAC Information

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BAC

Clone NameB6Ng01-044O12
Chromosome12 (Build37)
Map Location 8,247,488 - 8,393,911
singlet/doubletdoublet
Overlap gene1110057K04Rik, Gdf7, Hs1bp3
Upstream geneLOC668380, EG668388, Apob
Downstream geneBC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044O12.bB6Ng01-044O12.g
ACCDH870525DH870526
length157696
definitionDH870525|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O12, 5' end.DH870526|Mus musculus domesticus DNA, BAC clone: B6Ng01-044O12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,393,755 - 8,393,911)(8,247,488 - 8,248,183)
sequence
gaattcacgtttagtgctccagtcatatggacaattgggccctcttccct
cacacgatgtccagacaaagccatgctggaggccaccccaactcttggtc
tcctgccactcatagggacattcctaattgccctgggatggggtgggggt
tggggtg
gaattcaataaattgaagattacactctattcattgaattcttacttcca
ctcatttgtattttgccctagataaggccttttattcaggaagcagcttt
gcttttgatgttacctttggcgtcacttacagtctcttttctgtccttga
aattcctctcatgctatttgtggctgccatatttcccagcactcaggccg
agtgtgactgtgagctctgtctctacctactcacttaggctcaagtcagt
ttctgacattttttgtttgtgtaaagagacaaatcattgagtctctatct
cagtgtctctatcagcaaattggaaatatgttcttcaaggattttgtgac
gatttatgcaaaatattaagagtgttgcctaggatttcaacattctaagc
aagtatctattattgttcttatggaaataatactagactcatttcaatca
ttaggttaactactatattggttacctactgttatatataaaattgcccc
agactagctttgtaaaaccatatgtatttactgtcagtctctggtcagaa
acctgatcacagcttaaccaggtcccagagtgcagagtctttgacaagct
agtaattgtgtgtcttcccagggttgtagtctcctgtggatacttggatt
gagatgggaaaggatggaaagaaggaagggaggggaaaggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8393755_8393911
seq2: B6Ng01-044O12.b_46_202 (reverse)

seq1  CACCCCAACCCCCACCCCATCCCAGGGCAATTAGGAATGTCCCTATGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAACCCCCACCCCATCCCAGGGCAATTAGGAATGTCCCTATGAGT  50

seq1  GGCAGGAGACCAAGAGTTGGGGTGGCCTCCAGCATGGCTTTGTCTGGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGACCAAGAGTTGGGGTGGCCTCCAGCATGGCTTTGTCTGGACA  100

seq1  TCGTGTGAGGGAAGAGGGCCCAATTGTCCATATGACTGGAGCACTAAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTGAGGGAAGAGGGCCCAATTGTCCATATGACTGGAGCACTAAACG  150

seq1  TGAATTC  157
      |||||||
seq2  TGAATTC  157

seq1: chr12_8247488_8248183
seq2: B6Ng01-044O12.g_67_762

seq1  GAATTCAATAAATTGAAGATTACACTCTATTCATTGAATTCTTACTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAATTGAAGATTACACTCTATTCATTGAATTCTTACTTCCA  50

seq1  CTCATTTGTATTTTGCCCTAGATAAGGCCTTTTATTCAGGAAGCAGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGTATTTTGCCCTAGATAAGGCCTTTTATTCAGGAAGCAGCTTT  100

seq1  GCTTTTGATGTTACCTTTGGCGTCACTTACAGTCTCTTTTCTGTCCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGATGTTACCTTTGGCGTCACTTACAGTCTCTTTTCTGTCCTTGA  150

seq1  AATTCCTCTCATGCTATTTGTGGCTGCCATATTTCCCAGCACTCAGGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTCTCATGCTATTTGTGGCTGCCATATTTCCCAGCACTCAGGCCG  200

seq1  AGTGTGACTGTGAGCTCTGTCTCTACCTACTCACTTAGGCTCAAGTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGACTGTGAGCTCTGTCTCTACCTACTCACTTAGGCTCAAGTCAGT  250

seq1  TTCTGACATTTTTTGTTTGTGTAAAGAGACAAATCATTGAGTCTCTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACATTTTTTGTTTGTGTAAAGAGACAAATCATTGAGTCTCTATCT  300

seq1  CAGTGTCTCTATCAGCAAATTGGAAATATGTTCTTCAAGGATTTTGTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTCTATCAGCAAATTGGAAATATGTTCTTCAAGGATTTTGTGAC  350

seq1  GATTTATGCAAAATATTAAGAGTGTTGCCTAGGATTTCAACATTCTAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGCAAAATATTAAGAGTGTTGCCTAGGATTTCAACATTCTAAGC  400

seq1  AAGTATCTATTATTGTTCTTATGGAAATAATACTAGACTCATTTCAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATCTATTATTGTTCTTATGGAAATAATACTAGACTCATTTCAATCA  450

seq1  TTAGGTTAACTACTATATTGGTTACCTACTGTTATATATAAAATTGCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTAACTACTATATTGGTTACCTACTGTTATATATAAAATTGCCCC  500

seq1  AGACTAGCTTTGTAAAACCATATGTATTTACTGTCAGTCTCTGGTCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGCTTTGTAAAACCATATGTATTTACTGTCAGTCTCTGGTCAGAA  550

seq1  ACCTGATCACAGCTTAACCAGGTCCCAGAGTGCAGAGTCTTTGACAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATCACAGCTTAACCAGGTCCCAGAGTGCAGAGTCTTTGACAAGCT  600

seq1  AGTAATTGTGTGTCTTCCCAGGGTTGTAGTCTCCTGTGGATACTTGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTGTGTGTCTTCCCAGGGTTGTAGTCTCCTGTGGATACTTGGATT  650

seq1  GAGATGGGAAAGGATGGAAAGAAGGAAGGGAGGGGAAAGGGGAGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGGAAAGGATGGAAAGAAGGAAGGGAGGGGAAAGGGGAGGA  696