BAC Information

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BAC

Clone NameB6Ng01-045K14
Chromosome12 (Build37)
Map Location 75,114,869 - 75,115,383
singlet/doubletsinglet
Overlap geneSyt16
Upstream geneLOC100041234, Six1, Six4, Mnat1, Trmt5, Slc38a6, EG666356, Tmem30b, 2210039B01Rik, Prkch, EG666385, LOC100041489, Hif1a, EG277089, Snapc1
Downstream gene1700086L19Rik, Dbpht2, LOC671971, Kcnh5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045K14.bB6Ng01-045K14.g
ACCDH871055DH871056
length5101,167
definitionDH871055|Mus musculus domesticus DNA, BAC clone: B6Ng01-045K14, 5' end.DH871056|Mus musculus domesticus DNA, BAC clone: B6Ng01-045K14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cctaaccacactaaggatccagactggacagtgtggatctgctctggtgt
gcagcgtcaccctgccaccgtgtggccatgttcagaactgcacattcccc
cgatgttggcttccttcctctctgatatccagcaaaattagtcaccctga
atggctctttgaactaataaaatgtgaaaaacttatctaaaaaagcctta
taataatttttaaaagaaaacatatttagtaagttgcatcagttgtgtaa
aaacaccttggtgtgttagataatgtgtgtataattcaagactgggccga
agttatgttacaaagctggttaaagaggatggtctgaggttgtacatttt
ctgtgcattgaaggaacatatatagcaggccttaatgatatgtgtgtgtg
tgtgtgtgtgtgtgtgtatgacaattatgttttaggtcaatcctgttttt
ttttttcctctacgttaattttgtgtttagctgtttctaaccaagaacga
gaaaatactg
gaattcttacctgaggaatactgaatggctgaaaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagatggctaagatcaaaaattcaggtgatagca
gatgctgacgagaatgtggagaaagacggacactcctccattgctggtgg
gattgcaagcttgtacaaccactctggaaatcagtctttccattcctcag
aaaattggacatagtactaccagaggatcccgcaatacctctcctgggca
tatatccataagatgttccaactgataagaaggacacatgctccactatg
ttcatagcagccttatttataataaccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcggctattaaaaagaatgatatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcgcacaatatgtactcactgataagtggacattagcccagggac
ttagaatatccaagatacaagatacaaagcacatgaaactcaagaagaac
aaagaccaaagtgtggacactttgccccttcttagaattgggaacaaaac
acccatggaaggagttacagagacaaagtttggagctgagacaaaaggat
ggaccatctagagactaccatatccgggatccatcccataatcagccgcc
aaactcaaacaccattgcatacactagcaagatttgctgaaaggatcctg
atatagctgtctcttgtgagactttgctggggcctagcaaacacagaagt
ggatgctcacagtcagctattggatggatcacagggccccagtggagagc
tagagaaagtactcaaggagctaagggatctgcaaccctatgggtggaac
aacatatgaactaaccagtacccagagctcttgtctctgctgcatatgta
tcaaagatggcctaaccagcattcaatggaaagaaggccatttgtctgtc
aaactttttagtgcctcatacagggaatgcccagctcataaattggatag
tggtggtatatggtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_75114869_75115383
seq2: B6Ng01-045K14.b_46_561

seq1  GAATTCCCTAACCACACTAAGGATCCAGACTGGACAGTGTGGATCTGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAACCACACTAAGGATCCAGACTGGACAGTGTGGATCTGCTC  50

seq1  TGGTGTGCAGCGTCACCCTGCCACCGTGTGGCCATGTTCAGAACTGCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGCAGCGTCACCCTGCCACCGTGTGGCCATGTTCAGAACTGCACA  100

seq1  TTCCCCCGATGTTGGCTTCCTTCCTCTCTGATATCCAGCAAAATTAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCGATGTTGGCTTCCTTCCTCTCTGATATCCAGCAAAATTAGTCA  150

seq1  CCCTGAATGGCTCTTTGAACTAATAAAATGTGAAAAACTTATCTAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATGGCTCTTTGAACTAATAAAATGTGAAAAACTTATCTAAAAAA  200

seq1  GCCTTATAATAATTTTTAAAAGAAAACATATTTAGTAAGTTGCATCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATAATAATTTTTAAAAGAAAACATATTTAGTAAGTTGCATCAGTT  250

seq1  GTGTAAAAACACCTTGGTGTGTTAGATAATGTGTGTATAATTCAAGACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAAACACCTTGGTGTGTTAGATAATGTGTGTATAATTCAAGACTG  300

seq1  GGCCGAAGTTATGTTACAAAGCTGGTTAAAGAGGATGGTCTGAGGTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGAAGTTATGTTACAAAGCTGGTTAAAGAGGATGGTCTGAGGTTGTA  350

seq1  CATTTTCTGTGCATTGAAGGAACATATATAGCAGGCCTTAATGATATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGTGCATTGAAGGAACATATATAGCAGGCCTTAATGATATGTG  400

seq1  TGTGTGTGTGTGTGTGTGTGTGTATGACAATTATGTTTTAGGTCAATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTATGACAATTATGTTTTAGGTCAATCCT  450

seq1  GTTTTTTTTTTTCTTCTACGTTAATTTTGTGGTTAGCTGTTTCTAACCAA  500
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  GTTTTTTTTTTTCCTCTACGTTAATTTTGTGTTTAGCTGTTTCTAACCAA  500

seq1  GAACGAG-AAATACTG  515
      ||||||| ||||||||
seq2  GAACGAGAAAATACTG  516