BAC Information

Click to search

BAC

Clone NameB6Ng01-046E14
Chromosome12 (Build37)
Map Location 14,060,019 - 14,097,593
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
Downstream geneAW125753, LOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046E14.bB6Ng01-046E14.g
ACCDH871498DH871499
length991933
definitionDH871498|Mus musculus domesticus DNA, BAC clone: B6Ng01-046E14, 5' end.DH871499|Mus musculus domesticus DNA, BAC clone: B6Ng01-046E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,096,566 - 14,097,593)(14,060,019 - 14,060,981)
sequence
gaattcacagtcctttctacgctgaatattaaggttagtgagaaacgttg
aacaacaggtcaaatgaagactggggaaattcagagaaaatgtaaaacag
gacccaggacgaagcaggttaaggaagaggaattgattgttctgtatgaa
ttcaggatgtagaacagaaaggtttgtgggtaaaattgatggtatataca
ttttggttcaataaaaaagagaaaatagaatgttacaatggaataaactc
aggctaaaaggaaggcatgggttttttctaaagaaataaagaggactgga
tgatttcatcttagaattgggaccctaggcttcacctgaggtcctttgag
agccccaagggattccaggggtttcagaggttgtaaatgtttgaaaatta
taagtatggatgcacatttatgttgttcagaaaagaaggtttagtgtttc
cctaaaaacactaaaaaaatcaaaaatcccgcattaaaaaccaaatgaca
agtttactaagcacacagcaatcccattaaattccaattctcaaaggact
ttcttatcttggaatgaaggcagagtggctgattctggtaacagctcatc
acccaatattcttcaaattaagggcaataaggaaaaagcgagtgagtttt
ttgggaaatataatcagtggcccaggatctttagaaaagacaatgaaagg
agacaattaaaatcagccttggctgctttttaccttcctgtgtaatctac
acagacagcaacaaactaaagtcagaccctggttgtgtccaaagtgttct
atcattcagaaatgatctaaagggatctgcaaccctatagtggaacacat
atgactacagtacccggagctctgactctagctgcatatgtatcaaagat
gctagtcgcatcactgaagagagtcatgactgcaacttatatgctcagta
cagggaacacagcaaaggggagtggtggcaggggagtgggg
gaattctccattgaggaatcttgaatggctaagaagaggaacattcttcc
attactgagggagtggagggattcgtggagtggagactgggaacggagct
aacatttgaaatgtaacaaataaaatggttaataaaaaattttcaagcta
gtcaatccataaaattaaacattgagatagaaagattccccaagtccaca
cggtgaaatatatggaccaagactcatatgaatggtagggagatgctctg
aaagtgtgctgtgtaaaagagatggttcatatgagaaggcagtgggtatt
gggcaaggactttcagtttggctgagtctctgagtctaagagaaacagcc
tcttagttattctcttggctttcctaaattaacttcatcgttttctcagc
ataactaaggtctgaattttgctgtggaaagttatggatggtagtagcag
ccctctctcctttccaggatgctattggacattagtgactgaggaagaag
gaacacaaatgccgcctcagggctacagggaaaagactgggggcctcttt
ctataagaagcattatttttggaagctccgaggcatgatggagagataaa
tgtcttggaaagttaacagcagcacatctatcacactggaaatatttagc
aacatagggaaatggaggctacccaagcatcctgagtctcatgtgttcac
tgaagtaactttaaatagacacattaagcacagaagtcagaatgcagcac
acgtcatttgcccgcaatgctgggtataaaatgccaggactcattggagc
tttagatgtctgggacactgggacatcttgtacattctctcatctggact
caaatagtcaagctcatgcagcactgtccataaatactgacataacatga
ctttgggtggtggtatatgtgcatgatcactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_14096566_14097593
seq2: B6Ng01-046E14.b_44_1034 (reverse)

seq1  CCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTGTTCCCCT  50
      |||||||||||||||   |||||||||   ||||   || ||||| ||||
seq2  CCCCACTCCCCTGCC--ACCACTCCCC---TTTG---CT-GTGTT-CCCT  40

seq1  GTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTG  100
      ||||| | ||||||||   |||| ||||  ||  | |||||||  |||||
seq2  GTACT-GAGCATATAA--GTTGC-AGTC--AT--GACTCTCTT--CAGTG  80

seq1  ATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCT  150
      |||  |||||||  |||| |||||||||||||||||||||||| ||||||
seq2  ATG--CGACTAG--CATC-TTTGATACATATGCAGCTAGAGTC-AGAGCT  124

seq1  CCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGAT  200
      || ||||||||  ||| |||| ||| ||||||| ||||||||||||||||
seq2  CC-GGGTACTG--TAG-TCAT-ATG-TGTTCCA-CTATAGGGTTGCAGAT  167

seq1  CCCTTTAGATCATTTTCTTGAATGATAGAACACTTTGGACAACAACCAGG  250
      |||||||||||||||   |||||||||||||||||||||| |||||||||
seq2  CCCTTTAGATCATTT--CTGAATGATAGAACACTTTGGAC-ACAACCAGG  214

seq1  GTCTGACTTTAGTTTTGTTGCTGTCTGTGTAGATTACACAGGAAGGTAAA  300
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTCTGACTTTAG-TTTGTTGCTGTCTGTGTAGATTACACAGGAAGGTAAA  263

seq1  AAGCAGCCAAGGCTGATTTTAATTGTCTCCTTTCATTGTCTTTTCTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCCAAGGCTGATTTTAATTGTCTCCTTTCATTGTCTTTTCTAAAG  313

seq1  ATCCTGGGCCACTGATTATATTTCCCAAAAAACTCACTCGCTTTTTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGCCACTGATTATATTTCCCAAAAAACTCACTCGCTTTTTCCTT  363

seq1  ATTGCCCTTAATTTGAAGAATATTGGGTGATGAGCTGTTACCAGAATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCTTAATTTGAAGAATATTGGGTGATGAGCTGTTACCAGAATCAG  413

seq1  CCACTCTGCCTTCATTCCAAGATAAGAAAGTCCTTTGAGAATTGGAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTGCCTTCATTCCAAGATAAGAAAGTCCTTTGAGAATTGGAATTT  463

seq1  AATGGGATTGCTGTGTGCTTAGTAAACTTGTCATTTGGTTTTTAATGCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATTGCTGTGTGCTTAGTAAACTTGTCATTTGGTTTTTAATGCGG  513

seq1  GATTTTTGATTTTTTTAGTGTTTTTAGGGAAACACTAAACCTTCTTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGATTTTTTTAGTGTTTTTAGGGAAACACTAAACCTTCTTTTCT  563

seq1  GAACAACATAAATGTGCATCCATACTTATAATTTTCAAACATTTACAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACATAAATGTGCATCCATACTTATAATTTTCAAACATTTACAACC  613

seq1  TCTGAAACCCCTGGAATCCCTTGGGGCTCTCAAAGGACCTCAGGTGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAACCCCTGGAATCCCTTGGGGCTCTCAAAGGACCTCAGGTGAAGC  663

seq1  CTAGGGTCCCAATTCTAAGATGAAATCATCCAGTCCTCTTTATTTCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTCCCAATTCTAAGATGAAATCATCCAGTCCTCTTTATTTCTTTA  713

seq1  GAAAAAACCCATGCCTTCCTTTTAGCCTGAGTTTATTCCATTGTAACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACCCATGCCTTCCTTTTAGCCTGAGTTTATTCCATTGTAACATT  763

seq1  CTATTTTCTCTTTTTTATTGAACCAAAATGTATATACCATCAATTTTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCTCTTTTTTATTGAACCAAAATGTATATACCATCAATTTTACC  813

seq1  CACAAACCTTTCTGTTCTACATCCTGAATTCATACAGAACAATCAATTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACCTTTCTGTTCTACATCCTGAATTCATACAGAACAATCAATTCC  863

seq1  TCTTCCTTAACCTGCTTCGTCCTGGGTCCTGTTTTACATTTTCTCTGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTAACCTGCTTCGTCCTGGGTCCTGTTTTACATTTTCTCTGAAT  913

seq1  TTCCCCAGTCTTCATTTGACCTGTTGTTCAACGTTTCTCACTAACCTTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGTCTTCATTTGACCTGTTGTTCAACGTTTCTCACTAACCTTAA  963

seq1  TATTCAGCGTAGAAAGGACTGTGAATTC  1028
      ||||||||||||||||||||||||||||
seq2  TATTCAGCGTAGAAAGGACTGTGAATTC  991

seq1: chr12_14060019_14060981
seq2: B6Ng01-046E14.g_67_999

seq1  GAATTCTCCATTGAGGAATCTTGAATGGCTAAGAAGAGGAACATTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTGAGGAATCTTGAATGGCTAAGAAGAGGAACATTCTTCC  50

seq1  ATTACTGAGGGAGTGGAGGGATTCGTGGAGTGGAGACTGGGAACGGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGAGGGAGTGGAGGGATTCGTGGAGTGGAGACTGGGAACGGAGCT  100

seq1  AACATTTGAAATGTAACAAATAAAATGGTTAATAAAAAATTTTCAAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGAAATGTAACAAATAAAATGGTTAATAAAAAATTTTCAAGCTA  150

seq1  GTCAATCCATAAAATTAAACATTGAGATAGAAAGATTCCCCAAGTCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATCCATAAAATTAAACATTGAGATAGAAAGATTCCCCAAGTCCACA  200

seq1  CGGTGAAATATATGGACCAAGACTCATATGAATGGTAGGGAGATGCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAAATATATGGACCAAGACTCATATGAATGGTAGGGAGATGCTCTG  250

seq1  AAAGTGTGCTGTGTAAAAGAGATGGTTCATATGAGAAGGCAGTGGGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGCTGTGTAAAAGAGATGGTTCATATGAGAAGGCAGTGGGTATT  300

seq1  GGGCAAGGACTTTCAGTTTGGCTGAGTCTCTGAGTCTAAGAGAAACAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGGACTTTCAGTTTGGCTGAGTCTCTGAGTCTAAGAGAAACAGCC  350

seq1  TCTTAGTTATTCTCTTGGCTTTCCTAAATTAACTTCATCGTTTTCTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTATTCTCTTGGCTTTCCTAAATTAACTTCATCGTTTTCTCAGC  400

seq1  ATAACTAAGGTCTGAATTTTGCTGTGGAAAGTTATGGATGGTAGTAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAAGGTCTGAATTTTGCTGTGGAAAGTTATGGATGGTAGTAGCAG  450

seq1  CCCTCTCTCCTTTCCAGGATGCTATTGGACATTAGTGACTGAGGAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTCCTTTCCAGGATGCTATTGGACATTAGTGACTGAGGAAGAAG  500

seq1  GAACACAAATGCCGCCTCAGGGCTACAGGGAAAAGACTGGGGGCCTCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAATGCCGCCTCAGGGCTACAGGGAAAAGACTGGGGGCCTCTTT  550

seq1  CTATAAGAAGCATTATTTTTGGAAGCTCCGAGGCATGATGGAGAGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGAAGCATTATTTTTGGAAGCTCCGAGGCATGATGGAGAGATAAA  600

seq1  TGTCTTGGAAAGTTAACAGCAGCACATCTATCACACTGGAAATATTTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGAAAGTTAACAGCAGCACATCTATCACACTGGAAATATTTAGC  650

seq1  AACATAGGGAAATGGAGGCTACCCAAGCATCCTGAGTCTCATGTGTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGGAAATGGAGGCTACCCAAGCATCCTGAGTCTCATGTGTTCAC  700

seq1  TGAAGTAACTTTAAATAGACACATTAAGCACAGAAGTCAGAATGCAGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAACTTTAAATAGACACATTAAGCACAGAAGTCAGAATGCAGCAC  750

seq1  AACGTCATTTTGCCCGCAATGCTGGGTATAAAATGCCAGGACCTCCATTG  800
       |||||| ||||||||||||||||||||||||||||||||||   |||| 
seq2  -ACGTCA-TTTGCCCGCAATGCTGGGTATAAAATGCCAGGAC--TCATT-  795

seq1  GGAGCTTTAGATGTCTGGGGACAACTGGGGACATCTTTGTAACATTCCTC  850
      |||||||||||||||| ||||| ||| |||||||| |||| ||||| |||
seq2  GGAGCTTTAGATGTCT-GGGAC-ACT-GGGACATC-TTGT-ACATT-CTC  839

seq1  TCATCTTGGACTCAAAATAGTTCAAAGCCTCATTGCAGCACTGTCCCATA  900
      ||||| ||||||| |||||| ||||   |||| ||||||||||| |||| 
seq2  TCATC-TGGACTC-AAATAG-TCAA--GCTCA-TGCAGCACTGT-CCAT-  881

seq1  AAATACTGAACAATTAAACCATGACTTTGGGTTGTTGTTTAATATGTTGG  950
      |||||||| |||  |||  ||||||||||||| || ||   ||||||  |
seq2  AAATACTG-ACA--TAA--CATGACTTTGGGTGGTGGT---ATATGT--G  921

seq1  CAATGATCACTAC  963
      | |||||||||||
seq2  C-ATGATCACTAC  933