BAC Information

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BAC

Clone NameB6Ng01-047O21
Chromosome12 (Build37)
Map Location 78,820,962 - 78,821,347
singlet/doubletsinglet
Overlap genenone
Upstream geneChurc1, Gpx2, Rab15, Fntb, Max, LOC100041765, LOC100041772, Fut8, LOC230765
Downstream geneLOC666659, EG626215, Gphn, 4921509E07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047O21.bB6Ng01-047O21.g
ACCDH872653DH872654
length1,199380
definitionDH872653|Mus musculus domesticus DNA, BAC clone: B6Ng01-047O21, 5' end.DH872654|Mus musculus domesticus DNA, BAC clone: B6Ng01-047O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatccttttaatggggttgtttgat
tttctgaagtccaccttcttgagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttacagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttctttg
atccatttagatttgaccttagtacaaggagataagtatggatcgattcg
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttgtctgtctctataccagtaccatgcagtttttaccacaattg
ctctgtagtaaagctttaggtccggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcattgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatattgatcctgccaatccatgagcaggggagatctttccatct
tctgaagatcttcctttaatttctttcttcagagacttggaagttttatc
atacagatctttcacttccttagttagagtcacgccgagatattttatat
atttgtggactattgagaggtgtgtttccctaatttctttctcagctgtt
ttattcttgtgtagagaagggccatggacttggttgagttaatttatatc
cagctacttcaccgaagctggttatcagtaaggagttctcagtgggaatt
tttagggctctgaattatctatcgagtacaccgtcaaaagtgaaattgac
cattgcgcctgtcctcatgttagccctgagatccttttgtgtgccaatg
caccttcgagctcagagaactttaatttattaatacaattctcatccaag
atatgatccttatcttatttcctaaagcccagtttttttttaaaacttga
aattctgcaatagtccttggctacttttgttgtcatctgtctgtttcctc
tcctcctttcttagttcctactattctatttcttgcagtgttaagtgctc
tgctgcccaagtgcaggatggggtagagtcccttgcatgacaggagatgg
gagaaagatgacccattaatatttcaaaggtattatgttaaatcatttat
aggattaaattcactttttctttgaccccagaagccagcactcgctgctt
agcattagtggggctgtggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_78820962_78821347
seq2: B6Ng01-047O21.g_68_453

seq1  GAATTCCACCTTCGAGCTCAGAGAACTTTAATTTATTAATACAATTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTCGAGCTCAGAGAACTTTAATTTATTAATACAATTCTCA  50

seq1  TCCAAGATATGATCCTTATCTTATTTCCTAAAGCCCAGTTTTTTTTTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGATATGATCCTTATCTTATTTCCTAAAGCCCAGTTTTTTTTTAAA  100

seq1  ACTTGAAATTCTGCAATAGTCCTTGGCTACTTTTGTTGTCATCTGTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATTCTGCAATAGTCCTTGGCTACTTTTGTTGTCATCTGTCTGT  150

seq1  TTCCTCTCCTCCTTTCTTAGTTCCTACTATTCTATTTCTTGCAGTGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCTCCTTTCTTAGTTCCTACTATTCTATTTCTTGCAGTGTTAA  200

seq1  GTGCTCTGCTGCCCAAGTGCAGGATGGGGTAGAGTCCCTTGCATGACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTGCTGCCCAAGTGCAGGATGGGGTAGAGTCCCTTGCATGACAGG  250

seq1  AGATGGGAGAAAGATGACCCATTAATATTTCAAAGGTATTATGTTAAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGAGAAAGATGACCCATTAATATTTCAAAGGTATTATGTTAAATC  300

seq1  ATTTATAGGATTAAATTCACTTTTTCTTTGACCCCAGAAGCCAGCACTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGGATTAAATTCACTTTTTCTTTGACCCCAGAAGCCAGCACTCG  350

seq1  CTGCTTAGCATTAGTGGGGCTGTGGGGGGGGGGGGG  386
      ||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAGCATTAGTGGGGCTGTGGGGGGGGGGGGG  386