BAC Information

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BAC

Clone NameB6Ng01-048L24
Chromosome12 (Build37)
Map Location 39,950,072 - 39,951,106
singlet/doubletsinglet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048L24.bB6Ng01-048L24.g
ACCDH873216DH873217
length7831,021
definitionDH873216|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L24, 5' end.DH873217|Mus musculus domesticus DNA, BAC clone: B6Ng01-048L24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccatattttaatagggttatttgatt
tttctggagtccatcttcttgagttctttatctatattgcatattagtcc
cctatctgatttaggattgttaagagcctttcccaatctgttggtggctt
ttttgtcttattgactcataatgtgtactcactgataaggggatatcagc
ccagaaatttagaatatccaacatacaatttgctcaagaagaagaaagac
caaagtgtggatactttgctccttcttagaatggggaacaaaatacctat
ggaaggagttacagagacaaagttaggagctgagaaggaaggaaggacaa
tccagagactgccccacccggggatccatcccatatacaaccagcaaacc
cagacacgattgcatatgccagacagatttttctgacaggaccttgatat
agctctctcttgcgaggctatgcctgtgcctggcaaatagagaagtggat
gctcacagtcatctattggatggaacacagggcccctaatgaaggagcta
gagaaagtacccaaggagctaaaggggtctgaaaccctataggaggaaca
acaatatgaactaaccagtaccaccccccaccccgaactgtatctctatt
tgcatatgtagcagaggatggcctagtcagccatcaatgggagaagaggt
ccttggtcttgcgaagttcatatgccccagtacaggagaatggcaggcca
ggaagcagagtgggtggttggggagcagggtgg

gaattcaatatacttctttgaaataaacaggcaatttcgacttgtcctgt
gacaaatggatcaacttctaagtcctggaaagatgatattaagaaagaca
cagataacccagaacttctaaattacctggaaaatttgtattcaggaaaa
cttttgtaaaatctatgttactccaggattctgttggctgcttttggata
ctggccattaaagctggggacagtcctgcagcggggtccttttcacccct
ttgaacaccattgggtcatgcacagtgttttccaaaaccactgagtgtga
ggagcttagcgagtaataattattttgaaatccttggggttttttttgct
gttcaaatgagaccgtttgttctacttagaatgtaaaggtagtggatgct
attttaggataatctaattgtctctgtttttttttttttttttttttttg
aaggcttgcaaatatgtgctttataccagggagtaagcctcataaaacat
actttaaaaaaaaacatactatttgaaaaccatgttattttttaaaaata
ctaatggtttcatcaaaagtcatctttgatctcatcccctgaacatttct
tgcattatcgtaagaaagaccaatctaaagctaggctcaggctcggatga
catatgatcaccaccagctgcagcaaaagccagtctgcttaaaaataact
gatttgaccagaacagcagaacaaagctgaaaatcttctgacacctgatc
tcttcagcagctgtggaaatctattgaaagggctctccttttaatgcatg
tgtcagaatgctaattggaaaagtgacttcatggtctgagtcatacggtc
acctctgtagactcattagacttaaatgagcacactcaaatccagtgcat
cagtcaggttggtcatgggtgggacgaggatgctctgtttagctctggca
ctgtgacattctcaactagaggaatggggctatctaatagagaatgctag
taggatctaccatttgaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39950072_39951106
seq2: B6Ng01-048L24.g_68_1088

seq1  GAATTCAATATACTTCTTTGAAATAAACAGGCAATTTCGACTTGTCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATACTTCTTTGAAATAAACAGGCAATTTCGACTTGTCCTGT  50

seq1  GACAAATGGATCAACTTCTAAGTCCTGGAAAGATGATATTAAGAAAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATGGATCAACTTCTAAGTCCTGGAAAGATGATATTAAGAAAGACA  100

seq1  CAGATAACCCAGAACTTCTAAATTACCTGGAAAATTTGTATTCAGGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAACCCAGAACTTCTAAATTACCTGGAAAATTTGTATTCAGGAAAA  150

seq1  CTTTTGTAAAATCTATGTTACTCCAGGATTCTGTTGGCTGCTTTTGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTAAAATCTATGTTACTCCAGGATTCTGTTGGCTGCTTTTGGATA  200

seq1  CTGGCCATTAAAGCTGGGGACAGTCCTGCAGCGGGGTCCTTTTCACCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCATTAAAGCTGGGGACAGTCCTGCAGCGGGGTCCTTTTCACCCCT  250

seq1  TTGAACACCATTGGGTCATGCACAGTGTTTTCCAAAACCACTGAGTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACACCATTGGGTCATGCACAGTGTTTTCCAAAACCACTGAGTGTGA  300

seq1  GGAGCTTAGCGAGTAATAATTATTTTGAAATCCTTGGGGTTTTTTTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTTAGCGAGTAATAATTATTTTGAAATCCTTGGGGTTTTTTTTGCT  350

seq1  GTTCAAATGAGACCGTTTGTTCTACTTAGAATGTAAAGGTAGTGGATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATGAGACCGTTTGTTCTACTTAGAATGTAAAGGTAGTGGATGCT  400

seq1  ATTTTAGGATAATCTAATTGTCTCTG-TTTTTTTTTTTTTTTTTTTTTTG  449
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTTTAGGATAATCTAATTGTCTCTGTTTTTTTTTTTTTTTTTTTTTTTG  450

seq1  AAGGCTTGCAAATATGTGCTTTATACCAGGGAGTAAGCCTCATAAAACAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGCAAATATGTGCTTTATACCAGGGAGTAAGCCTCATAAAACAT  500

seq1  ACTTTAAAAAAAAACATACTATTTGAAAACCATGTTATTTTTTAAAAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAAAAAAACATACTATTTGAAAACCATGTTATTTTTTAAAAATA  550

seq1  CTAATGGTTTCATCAAAAGTCATCTTTGATCTCATCCCCTGAACATTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGTTTCATCAAAAGTCATCTTTGATCTCATCCCCTGAACATTTCT  600

seq1  TGCATTATCGTAAGAAAGACCAATCTAAAGCTAGGCTCAGGCTCGGATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTATCGTAAGAAAGACCAATCTAAAGCTAGGCTCAGGCTCGGATGA  650

seq1  CATATGATCACCACCAGCTGCAGCAAAAGCCAGTCTGCTTAAAAATAACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGATCACCACCAGCTGCAGCAAAAGCCAGTCTGCTTAAAAATAACT  700

seq1  GATTTGACCAGAACAGCAGAACAAAGCTGAAAATCTTCTGACACCTGATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGACCAGAACAGCAGAACAAAGCTGAAAATCTTCTGACACCTGATC  750

seq1  CCTTCAGCAGCTGTGGAAATCTATTGAAAGGGCTCTCCTTTTAATGCATG  799
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCAGCTGTGGAAATCTATTGAAAGGGCTCTCCTTTTAATGCATG  800

seq1  TGTCAGAATGCTAATTGGAAAAGTGACTTCATGTTCTGAGTCATACGGTC  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTCAGAATGCTAATTGGAAAAGTGACTTCATGGTCTGAGTCATACGGTC  850

seq1  ACCTCTGTAGACCTCATTAGACTTAAATGAGCACACTCAAATCCAGTGCC  899
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  ACCTCTGTAGA-CTCATTAGACTTAAATGAGCACACTCAAATCCAGTG-C  898

seq1  ATCAGTCAGGTTGGCCCATGGGTTGGGAACGAAGATTGCTCTGTATTTAG  949
      ||||||||||||||  |||||||  || |||| || |||||||  |||| 
seq2  ATCAGTCAGGTTGG-TCATGGGT--GGGACGAGGA-TGCTCTG--TTTA-  941

seq1  GCTCCTGGCCAACTGTGAACATCCTCAACTAGAGAAATTGGGGGCTATCT  999
      ||| |||||  |||||| |||| ||||||||||| |||  ||||||||||
seq2  GCT-CTGGC--ACTGTG-ACATTCTCAACTAGAGGAAT--GGGGCTATCT  985

seq1  AATAGAG-ATGCTAGTATAGGATCTA-CATTTGAGGCA  1035
      ||||||| |||||||  ||||||||| |||||||||||
seq2  AATAGAGAATGCTAG--TAGGATCTACCATTTGAGGCA  1021


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