BAC Information

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BAC

Clone NameB6Ng01-051D12
Chromosome12 (Build37)
Map Location 5,969,134 - 6,105,070
singlet/doubletdoublet
Overlap geneLOC672098
Upstream geneAtad2b, LOC668332, Klhl29, 2810032G03Rik, LOC435292, LOC100042095
Downstream geneLOC100043137, LOC238049, LOC100042118
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051D12.bB6Ng01-051D12.g
ACCDH874926DH874927
length1,0661,178
definitionDH874926|Mus musculus domesticus DNA, BAC clone: B6Ng01-051D12, 5' end.DH874927|Mus musculus domesticus DNA, BAC clone: B6Ng01-051D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,969,134 - 5,969,996)(6,103,864 - 6,105,070)
sequence
gaattcattcagtcttaggaacccataggacttcagagtgaagatagagt
aattttgtgactgtcacttgacaatgatatgataccttaaacaggatgtg
aattgtagaagaagcagttgataataaggccccctaataattctttaaaa
atttccatagaccaagagaaattattagtagttcactcttaacaacaaca
taataggaaaaccattcaatgggtaaaggatttgaattgataccaatgaa
gaaatataatcaataattgcatgaagggaatctcaaaaccatcagttgtc
agagaaacaaaagtttatatttattagaatagtaagaattcaaaagacca
ctgggtggctgttgcatgccacagacgaacctcacttgggtcctcgatcc
acaggtgaaactcgggttccggttacaggtgggcaaagtgttggcaagaa
gaagggacgacaaaagtgacacaagggagtgtggatctgaatgtaatttg
tcaaatcaagcatcaaacattttttacagaagaaaatagggaagttaggt
gacccactggcaaggtatgatgaggttactggattcttacacaaaacagg
aatgtaaacatggaaggactggcaggaaccaactaggataaaattcaatg
tttttaataactgggatcaaaagcagctccacctaaggtccacttaaaag
ccaggggcaagggcttcctgcccttggcatagttcctattctagtctatt
gtatagtccacctttcccctaggccatgtatatgagtgtaactcagctat
ctatagttctatctactctggttcctccttagattccaaacttccttctt
cctagataatggtaaattcctgagtagagcagtgacttagctatccatgc
ccagggttggctcaagggactgcctagaatctaacttagctatatgtcaa
atagagccacttataataaagcatattaagggaaagcacacagatccatt
taccaactaaagcaggacattggagcatatgttttacaggatgccacatt
ccaggagagtaggttt

gaattcaaagaacaatcaagaaagcaaatggcccaatcaaaaaaaaaaaa
tagttatgggcctgaacagagagttctcaaataaagaaataaaaatggct
aagagattttaaaatcatttaacatccttagcaattgtgggaatataaat
catcacaattattcatattatactgaaagtttcaacttattagaaagcat
gggcagtaactttcctttgaaaaaaagagatttacaaagttgcactgctc
cctaattcgttgctgtcatggctatgtcatgagatcttttttctcaacat
ccttgatgtatcctttaatcaatatatgatctaaaagcaacttagatcct
attagactagccttgtgcagaaatttctttcctgaatattgtttattata
cctttgtattgttgtgacatcaaaagatccataaacatacatatcagcat
aatctgtaacattattcttaaagacataatgcataacaccctgcttaaag
tgttacagcctaatatttattcctgagagaaaaatttctgtcctaaatac
attgtctcagacaattaaaatagtgtaaccctgcctgatactatgtaaca
attccaaataattcccttttaacttgtgcttgacatgacagcacttctta
tactttgtgcctacttaaactgtctgactttaattttttttcattatgca
ttcttcaagtacgctagaagccaagagaatagaaataatacatgcataaa
tgcattaagaatagatgcagtgttaaacctcagtctgaaatagggctgcc
tccctccagcctggaggagttgataaggcatcatttagtggggcataata
gatgatttggatgcaaaatgtggaaccacagagattatgacctgtctgtc
ttcaaccaggcaagatagactcacacagaggactagatgcatgatatttt
aaatgattttcctggttctaggatttcccagcagatgaacatacacattc
tctctacagtgaatgcaggacttacccaaccccgccccagagatcagtat
gtacagaaagaacatcaagtagataagaactactagactcatgtgatcga
ctacaaagacttgaattatgcatcgctttgaaagcaagttgtatgccatt
ccttaatggtcgagagatcgtaaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_5969134_5969996
seq2: B6Ng01-051D12.b_47_909

seq1  GAATTCATTCAGTCTTAGGAACCCATAGGACTTCAGAGTGAAGATAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCAGTCTTAGGAACCCATAGGACTTCAGAGTGAAGATAGAGT  50

seq1  AATTTTGTGACTGTCACTTGACAATGATATGATACCTTAAACAGGATGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTGACTGTCACTTGACAATGATATGATACCTTAAACAGGATGTG  100

seq1  AATTGTAGAAGAAGCAGTTGATAATAAGGCCCCCTAATAATTCTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAGAAGAAGCAGTTGATAATAAGGCCCCCTAATAATTCTTTAAAA  150

seq1  ATTTCCATAGACCAAGAGAAATTATTAGTAGTTCACTCTTAACAACAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATAGACCAAGAGAAATTATTAGTAGTTCACTCTTAACAACAACA  200

seq1  TAATAGGAAAACCATTCAATGGGTAAAGGATTTGAATTGATACCAATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGAAAACCATTCAATGGGTAAAGGATTTGAATTGATACCAATGAA  250

seq1  GAAATATAATCAATAATTGCATGAAGGGAATCTCAAAACCATCAGTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATAATCAATAATTGCATGAAGGGAATCTCAAAACCATCAGTTGTC  300

seq1  AGAGAAACAAAAGTTTATATTTATTAGAATAGTAAGAATTCAAAAGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACAAAAGTTTATATTTATTAGAATAGTAAGAATTCAAAAGACCA  350

seq1  CTGGGTGGCTGTTGCATGCCACAGACGAACCTCACTTGGGTCCTCGATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGGCTGTTGCATGCCACAGACGAACCTCACTTGGGTCCTCGATCC  400

seq1  ACAGGTGAAACTCGGGTTCCGGTTACAGGTGGGCAAAGTGTTGGCAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGAAACTCGGGTTCCGGTTACAGGTGGGCAAAGTGTTGGCAAGAA  450

seq1  GAAGGGACGACAAAAGTGACACAAGGGAGTGTGGATCTGAATGTAATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACGACAAAAGTGACACAAGGGAGTGTGGATCTGAATGTAATTTG  500

seq1  TCAAATCAAGCATCAAACATTTTTTACAGAAGAAAATAGGGAAGTTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAAGCATCAAACATTTTTTACAGAAGAAAATAGGGAAGTTAGGT  550

seq1  GACCCACTGGCAAGGTATGATGAGGTTACTGGATTCTTACACAAAACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACTGGCAAGGTATGATGAGGTTACTGGATTCTTACACAAAACAGG  600

seq1  AATGTAAACATGGAAGGACTGGCAGGAACCAACTAGGATAAAATTCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAACATGGAAGGACTGGCAGGAACCAACTAGGATAAAATTCAATG  650

seq1  TTTTTAATAACTGGGATCAAAAGCAGCTCCACCTAAGGTCCACTTAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATAACTGGGATCAAAAGCAGCTCCACCTAAGGTCCACTTAAAAG  700

seq1  CCAGGGGCAAGGGCTTCCTGCCCTTGGCATAGTTCCTATTCTAGTCTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGCAAGGGCTTCCTGCCCTTGGCATAGTTCCTATTCTAGTCTATT  750

seq1  GTATAGTCCACCTTTCCCCTAGGCCATGTATATGAGTGTAACTCAGCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGTCCACCTTTCCCCTAGGCCATGTATATGAGTGTAACTCAGCTAT  800

seq1  CTATAGTTCTATCTACTCTGGTTCCTCCTTAGATTCCAAACTTCCTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTTCTATCTACTCTGGTTCCTCCTTAGATTCCAAACTTCCTTCTT  850

seq1  CCTAGATAATGGT  863
      |||||||||||||
seq2  CCTAGATAATGGT  863


seq1: chr12_6103864_6105070
seq2: B6Ng01-051D12.g_66_1243 (reverse)

seq1  TTCTTTTACCGATCTCTCTGGGCACATATAAGGAAAATGGACATTACAAC  50
      |||||||| |||||||||   |  ||| |||||  ||||| || ||||||
seq2  TTCTTTTA-CGATCTCTC---GACCAT-TAAGG--AATGG-CA-TACAAC  41

seq1  TTTGCTTTCAAGAGCTGATTGGCATAATCTAAGGTCTTTGTAGTCTGAAT  100
       |||||||||| ||| |||  ||||||| | | |||||||||||| ||  
seq2  -TTGCTTTCAA-AGC-GAT--GCATAAT-TCAAGTCTTTGTAGTC-GA--  82

seq1  TCACATTTGAGTCTAGTAGTTCTTTATCTTACTTGATTGTTCTATCTGTA  150
      |||||  ||||||||||||||| ||||| ||||||| |||||| ||||||
seq2  TCACA--TGAGTCTAGTAGTTC-TTATC-TACTTGA-TGTTCTTTCTGTA  127

seq1  CATACTGGATCTCTGGGGGCGGGGTTGGGTAAGTCCTGCATTCACTGTAG  200
      |||||| ||||||| |||||||||||||||||||||||||||||||||||
seq2  CATACT-GATCTCT-GGGGCGGGGTTGGGTAAGTCCTGCATTCACTGTAG  175

seq1  AGAGAATGTGTATGTTCATTCTGCTGGGAAATCCTAAGAACCAGGAAAAT  250
      |||||||||||||||||| |||||||||||||||| ||||||||||||| 
seq2  AGAGAATGTGTATGTTCA-TCTGCTGGGAAATCCT-AGAACCAGGAAAA-  222

seq1  TCATTCTAAAATATCATGCATCTAGTCCTCTGTGTGAGTCTATCTTGCCT  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATT-TAAAATATCATGCATCTAGTCCTCTGTGTGAGTCTATCTTGCCT  271

seq1  GGTTGAAGACAGACAGGTCATAATCTCTGTGGTTCCACATTTTGCATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAGACAGACAGGTCATAATCTCTGTGGTTCCACATTTTGCATCCA  321

seq1  AATCATCTATTATGCCCCACTAAATGATGCCTTATCAACTCCTCCAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTATTATGCCCCACTAAATGATGCCTTATCAACTCCTCCAGGCT  371

seq1  GGAGGGAGGCAGCCCTATTTCAGACTGAGGTTTAACACTGCATCTATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGCAGCCCTATTTCAGACTGAGGTTTAACACTGCATCTATTCT  421

seq1  TAATGCATTTATGCATGTATTATTTCTATTCTCTTGGCTTCTAGCGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCATTTATGCATGTATTATTTCTATTCTCTTGGCTTCTAGCGTACT  471

seq1  TGAAGAATGCATAATGAAAAAAAATTAAAGTCAGACAGTTTAAGTAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATGCATAATGAAAAAAAATTAAAGTCAGACAGTTTAAGTAGGCA  521

seq1  CAAAGTATAAGAAGTGCTGTCATGTCAAGCACAAGTTAAAAGGGAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATAAGAAGTGCTGTCATGTCAAGCACAAGTTAAAAGGGAATTAT  571

seq1  TTGGAATTGTTACATAGTATCAGGCAGGGTTACACTATTTTAATTGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTGTTACATAGTATCAGGCAGGGTTACACTATTTTAATTGTCTG  621

seq1  AGACAATGTATTTAGGACAGAAATTTTTCTCTCAGGAATAAATATTAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGTATTTAGGACAGAAATTTTTCTCTCAGGAATAAATATTAGGC  671

seq1  TGTAACACTTTAAGCAGGGTGTTATGCATTATGTCTTTAAGAATAATGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACACTTTAAGCAGGGTGTTATGCATTATGTCTTTAAGAATAATGTT  721

seq1  ACAGATTATGCTGATATGTATGTTTATGGATCTTTTGATGTCACAACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTATGCTGATATGTATGTTTATGGATCTTTTGATGTCACAACAAT  771

seq1  ACAAAGGTATAATAAACAATATTCAGGAAAGAAATTTCTGCACAAGGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTATAATAAACAATATTCAGGAAAGAAATTTCTGCACAAGGCTA  821

seq1  GTCTAATAGGATCTAAGTTGCTTTTAGATCATATATTGATTAAAGGATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATAGGATCTAAGTTGCTTTTAGATCATATATTGATTAAAGGATAC  871

seq1  ATCAAGGATGTTGAGAAAAAAGATCTCATGACATAGCCATGACAGCAACG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGATGTTGAGAAAAAAGATCTCATGACATAGCCATGACAGCAACG  921

seq1  AATTAGGGAGCAGTGCAACTTTGTAAATCTCTTTTTTTCAAAGGAAAGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGGAGCAGTGCAACTTTGTAAATCTCTTTTTTTCAAAGGAAAGTT  971

seq1  ACTGCCCATGCTTTCTAATAAGTTGAAACTTTCAGTATAATATGAATAAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCATGCTTTCTAATAAGTTGAAACTTTCAGTATAATATGAATAAT  1021

seq1  TGTGATGATTTATATTCCCACAATTGCTAAGGATGTTAAATGATTTTAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGATTTATATTCCCACAATTGCTAAGGATGTTAAATGATTTTAAA  1071

seq1  ATCTCTTAGCCATTTTTATTTCTTTATTTGAGAACTCTCTGTTCAGGCCC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTAGCCATTTTTATTTCTTTATTTGAGAACTCTCTGTTCAGGCCC  1121

seq1  ATAACTATTTTTTTTTTTTGATTGGGCCATTTGCTTTCTTGATTGTTCTT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTATTTTTTTTTTTTGATTGGGCCATTTGCTTTCTTGATTGTTCTT  1171

seq1  TGAATTC  1207
      |||||||
seq2  TGAATTC  1178


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