BAC Information

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BAC

Clone NameB6Ng01-051L18
Chromosome12 (Build37)
Map Location 21,219,611 - 21,369,934
singlet/doubletdoublet
Overlap geneDdef2, Itgb1bp1, Cpsf3, Iah1, Adam17
Upstream geneLOC668614, LOC100042751, LOC100043371, EG668455, LOC100042755, LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257
Downstream geneYwhaq, LOC100043407, LOC100042796, 6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051L18.bB6Ng01-051L18.g
ACCDH875288DH875289
length1,1821,012
definitionDH875288|Mus musculus domesticus DNA, BAC clone: B6Ng01-051L18, 5' end.DH875289|Mus musculus domesticus DNA, BAC clone: B6Ng01-051L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,219,611 - 21,220,795)(21,368,924 - 21,369,934)
sequence
gaattccaggccagggtgaactatataatgaggtcttacataaaaataaa
aagtaaaagatgggaagggagccaatacaatggctcagagggcaaaagct
ctcggtgcacaaacctaataccggttcagctcccagatgctgccgtggaa
ggagagaaccaagtcctgatgacacctgtcctggccctggcctggccact
ctcacacatagacgtgcacacactctaacaacaacgacgcgtttgcaaag
aggaaaagaattagctttccatacggttgcacttaagtgaccagccgtct
ggttcttctccatcgttcctttggtatggtgatatgtttgagtcccccac
acatcaccaagtgataacaatgtggtttggctattataatggataacttt
gtctctagtccattgttgaggttagccccgaactcagagactcaaatgat
cctcttgccgcaacccctgagtgctgggatgtgatgagaatttaatgtaa
atcctcttagctctcagtaaatttaagtcactacttaacaaaacatagtt
ctcagactgtaactgaatcttgttgtttttctcctaaatgcatttacctt
ttgtgaccgaagtctaggagagtaagtacccagtattttcacaaattcca
gagttttgcatgttttattcatagctatttcttcatacatcttaatggct
ggttcatttccgctttcaatgtctccactttcactgtagtagatgatttt
actgtaaagatggtagaatttggatgcataagacaagggtaatggaaaat
tcccaagtttagattagacttccaccactgccgtgctttcccgagaatgg
gagccgcttcacctccccggcccccttacccggccctccctgctctgtat
gcccttctagtgcatcccaagtccttctcagcaggactgcctctgagcac
cttctccataatgctgctttgctggagattgctcacagcatgttgacctt
gtcctagtccagaaagtgcagtcttgtgatttgagactttcacaataagt
agagaggcagtgcctgacattaacaatggctgctcctctaggcactggtg
ggggagctttttttttttttttttttggcttgagagactctactccagaa
gaaatacccgagtttattaagcacgctgtgtt
gaattccaggtccattggaatgatttgaatatccttgatcgtggaaagga
aaggagaatatcaactcaggtattttaggtagctattatttatttttgtt
atatgtgtttgagtgttcacatggatatatgtgcatcaaatgtgtacctg
ctgtctgtgtaggccaggagagggtgtcagatccccatgaactggaggga
cacactcttgtgagtcaccatgtggtgctgggaacagaacctgggtcctc
tgcaagaacagtaagcactgggtcacctctccagtcccctttcagacagt
tttaaacgagactagaggcagtatttttaagtggaaaaccttttaaaaag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaaagttcttattttggagg
ggccagggagtctgttggttgaagcatgaagaggaatggcatgtacttac
tatagtagtctagttttgaatctcatttgtgctttttctcagctggggtc
agtgcatctttgttttcttgagtggtgacttggtctggtaaagcagttgg
tgttggtttccttctgaggaatcagtccgttccctctgcctgcacctact
gagcaggcggatgccaatgcacctgttggggcagcagtggtagtagtgct
cctcccagctctgggtttggaggatgagtcttgctgacaagcctaaactg
gtctggaactcacgctttctgcggaagctttactttcctggctctggttt
gcaagaaaccagaggctgttgatacatacatttgttactcttcttactaa
cagtcccctgaaaaagggtggaccatgaaagtgtagctcagctaatttat
cgtggacactttaaacatgcacactagaatgcctttattttaaagtctaa
gtggtatatatggtaagtctttagcgacaccaaattggtaggtttctaaa
ccccagttccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_21219611_21220795
seq2: B6Ng01-051L18.b_45_1226

seq1  GAATTCCAGGCCAGGGTGAACTATATAATGAGGTCTTACATAAAAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGGGTGAACTATATAATGAGGTCTTACATAAAAATAAA  50

seq1  AAGTAAAAGATGGGAAGGGAGCCAATACAATGGCTCAGAGGGCAAAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAGATGGGAAGGGAGCCAATACAATGGCTCAGAGGGCAAAAGCT  100

seq1  CTCGGTGCACAAACCTAATACCGGTTCAGCTCCCAGATGCTGCCGTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGTGCACAAACCTAATACCGGTTCAGCTCCCAGATGCTGCCGTGGAA  150

seq1  GGAGAGAACCAAGTCCTGATGACACCTGTCCTGGCCCTGGCCTGGCCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAACCAAGTCCTGATGACACCTGTCCTGGCCCTGGCCTGGCCACT  200

seq1  CTCACACATAGACGTGCACACACTCTAACAACAACGACGCGTTTGCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACATAGACGTGCACACACTCTAACAACAACGACGCGTTTGCAAAG  250

seq1  AGGAAAAGAATTAGCTTTCCATACGGTTGCACTTAAGTGACCAGCCGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGAATTAGCTTTCCATACGGTTGCACTTAAGTGACCAGCCGTCT  300

seq1  GGTTCTTCTCCATCGTTCCTTTGGTATGGTGATATGTTTGAGTCCCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTCTCCATCGTTCCTTTGGTATGGTGATATGTTTGAGTCCCCCAC  350

seq1  ACATCACCAAGTGATAACAATGTGGTTTGGCTATTATAATGGATAACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACCAAGTGATAACAATGTGGTTTGGCTATTATAATGGATAACTTT  400

seq1  GTCTCTAGTCCATTGTTGAGGTTAGCCCCGAACTCAGAGACTCAAATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGTCCATTGTTGAGGTTAGCCCCGAACTCAGAGACTCAAATGAT  450

seq1  CCTCTTGCCGCAACCCCTGAGTGCTGGGATGTGATGAGAATTTAATGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCCGCAACCCCTGAGTGCTGGGATGTGATGAGAATTTAATGTAA  500

seq1  ATCCTCTTAGCTCTCAGTAAATTTAAGTCACTACTTAACAAAACATAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTTAGCTCTCAGTAAATTTAAGTCACTACTTAACAAAACATAGTT  550

seq1  CTCAGACTGTAACTGAATCTTGTTGTTTTTCTCCTAAATGCATTTACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTGTAACTGAATCTTGTTGTTTTTCTCCTAAATGCATTTACCTT  600

seq1  TTGTGACCGAAGTCTAGGAGAGTAAGTACCCAGTATTTTCACAAATTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACCGAAGTCTAGGAGAGTAAGTACCCAGTATTTTCACAAATTCCA  650

seq1  GAGTTTTGCATGTTTTATTCATAGCTATTTCTTCATACATCTTAATGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGCATGTTTTATTCATAGCTATTTCTTCATACATCTTAATGGCT  700

seq1  GGTTCATTTCCGCTTTCAATGTCTCCACTTTCACTGTAGTAGATGATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATTTCCGCTTTCAATGTCTCCACTTTCACTGTAGTAGATGATTTT  750

seq1  ACTGTAAAGATGGTAGAATTTGGATGCATAAGACAAGGGTAATGGAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAGATGGTAGAATTTGGATGCATAAGACAAGGGTAATGGAAAAT  800

seq1  TCCCAAGTTTAGATTAGACTTCCACCACTGCCGTGCTTTCCCGAGAAT-G  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCCAAGTTTAGATTAGACTTCCACCACTGCCGTGCTTTCCCGAGAATGG  850

seq1  GAGCCGCTTCACCTCCCCCGGCCCCCTTACCCGGCCCTCCCTGCTCTGTA  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GAGCCGCTTCACCT-CCCCGGCCCCCTTACCCGGCCCTCCCTGCTCTGTA  899

seq1  TGCCCTTCTAGTGCATCCCAAGTCCTTTCTCAGCAGGACTGCCTCTGAGC  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGCCCTTCTAGTGCATCCCAAGTCC-TTCTCAGCAGGACTGCCTCTGAGC  948

seq1  ACCTTCTCCATAATGCTGCTTTGCTGGAGATTGCTCACAGCATGGTGACC  999
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACCTTCTCCATAATGCTGCTTTGCTGGAGATTGCTCACAGCATGTTGACC  998

seq1  TTGTCCTAGTCCAGAAAGTGCAAGTCTTGTGATTTGAGACTTTCACAATA  1049
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGTCCTAGTCCAGAAAGTGC-AGTCTTGTGATTTGAGACTTTCACAATA  1047

seq1  GGTAGAAGAGACAGTGCCTGACATTAAC-ATGGCTGCT-CTCTAGAGCAC  1097
       |||| |||| ||||||||||||||||| ||||||||| |||||| ||||
seq2  AGTAG-AGAGGCAGTGCCTGACATTAACAATGGCTGCTCCTCTAG-GCAC  1095

seq1  TGGT-GGGGAGCTTTTTTTTTTTTTTTTTTGGTCTGAGGAGACTCTAACT  1146
      |||| ||||||||||||||||||||||||| | ||   |||||||| |||
seq2  TGGTGGGGGAGCTTTTTTTTTTTTTTTTTTTGGCTTGAGAGACTCT-ACT  1144

seq1  CAGGAAGAAATAACGCAGTTTATGAGGCATGGCTGTGTT  1185
      |  ||||||||| |  ||||||| | |||  ||||||||
seq2  CCAGAAGAAATACCCGAGTTTATTAAGCA-CGCTGTGTT  1182

seq1: chr12_21368924_21369934
seq2: B6Ng01-051L18.g_68_1079 (reverse)

seq1  ATGG-ACTGGGG-TTAGAAA-CTAACAATTTGGTGTCGCTAAAGAC-TAC  46
      |||| ||||||| ||||||| ||| ||||||||||||||||||||| |||
seq2  ATGGAACTGGGGTTTAGAAACCTACCAATTTGGTGTCGCTAAAGACTTAC  50

seq1  CATATATA-CACTTAGACTTTAAAATAAAAGGCATTTCTAGTGTGCATGT  95
      |||||||| ||||||||||||||||| ||||||| |||||||||||||||
seq2  CATATATACCACTTAGACTTTAAAAT-AAAGGCA-TTCTAGTGTGCATGT  98

seq1  TTAAAGTGTCCAAGATAAAATTAGCTGAGCTAACACTTTCATGGTCAACC  145
      |||||||||||| ||| |||||||||||||| |||||||||||||| |||
seq2  TTAAAGTGTCCACGAT-AAATTAGCTGAGCT-ACACTTTCATGGTCCACC  146

seq1  CTTTTTCAGGGGACTGTTAGTAAGAAGAGTAACAAATGTATGTATCAACA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAGGGGACTGTTAGTAAGAAGAGTAACAAATGTATGTATCAACA  196

seq1  GCCTCTGGTTTCTTGCAAACCAGAGCCAGGAAAGTAAAGCTTCCGCAGAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGGTTTCTTGCAAACCAGAGCCAGGAAAGTAAAGCTTCCGCAGAA  246

seq1  AGCCTGAGTTCCAGACCAGTTTAGGCTTGTCAGCAAGACTCATCCTCCAA  295
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGAGTTCCAGACCAGTTTAGGCTTGTCAGCAAGACTCATCCTCCAA  296

seq1  ACCCAGAGCTGGGAGGAGCACTACTACCACTGCTGCCCCAACAGGTGCAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGAGCTGGGAGGAGCACTACTACCACTGCTGCCCCAACAGGTGCAT  346

seq1  TGGCATCCGCCTGCTCAGTAGGTGCAGGCAGAGGGAACGGACTGATTCCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCCGCCTGCTCAGTAGGTGCAGGCAGAGGGAACGGACTGATTCCT  396

seq1  CAGAAGGAAACCAACACCAACTGCTTTACCAGACCAAGTCACCACTCAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGAAACCAACACCAACTGCTTTACCAGACCAAGTCACCACTCAAG  446

seq1  AAAACAAAGATGCACTGACCCCAGCTGAGAAAAAGCACAAATGAGATTCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGATGCACTGACCCCAGCTGAGAAAAAGCACAAATGAGATTCA  496

seq1  AAACTAGACTACTATAGTAAGTACATGCCATTCCTCTTCATGCTTCAACC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGACTACTATAGTAAGTACATGCCATTCCTCTTCATGCTTCAACC  546

seq1  AACAGACTCCCTGGCCCCTCCAAAATAAGAACTTTTCTTTCTTTCTTTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTCCCTGGCCCCTCCAAAATAAGAACTTTTCTTTCTTTCTTTCT  596

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  646

seq1  CTTTCTTTCTTTCTTTCTTTTTAAAAGGTTTTCCACTTAAAAATACTGCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTTTAAAAGGTTTTCCACTTAAAAATACTGCC  696

seq1  TCTAGTCTCGTTTAAAACTGTCTGAAAGGGGACTGGAGAGGTGACCCAGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCTCGTTTAAAACTGTCTGAAAGGGGACTGGAGAGGTGACCCAGT  746

seq1  GCTTACTGTTCTTGCAGAGGACCCAGGTTCTGTTCCCAGCACCACATGGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTGTTCTTGCAGAGGACCCAGGTTCTGTTCCCAGCACCACATGGT  796

seq1  GACTCACAAGAGTGTGTCCCTCCAGTTCATGGGGATCTGACACCCTCTCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACAAGAGTGTGTCCCTCCAGTTCATGGGGATCTGACACCCTCTCC  846

seq1  TGGCCTACACAGACAGCAGGTACACATTTGATGCACATATATCCATGTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTACACAGACAGCAGGTACACATTTGATGCACATATATCCATGTGA  896

seq1  ACACTCAAACACATATAACAAAAATAAATAATAGCTACCTAAAATACCTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAAACACATATAACAAAAATAAATAATAGCTACCTAAAATACCTG  946

seq1  AGTTGATATTCTCCTTTCCTTTCCACGATCAAGGATATTCAAATCATTCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATATTCTCCTTTCCTTTCCACGATCAAGGATATTCAAATCATTCC  996

seq1  AATGGACCTGGAATTC  1011
      ||||||||||||||||
seq2  AATGGACCTGGAATTC  1012