BAC Information

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BAC

Clone NameB6Ng01-053J20
Chromosome12 (Build37)
Map Location 14,305,776 - 14,306,877
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481, AW125753
Downstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053J20.bB6Ng01-053J20.g
ACCDH876613DH876614
length1,0941,168
definitionDH876613|Mus musculus domesticus DNA, BAC clone: B6Ng01-053J20, 5' end.DH876614|Mus musculus domesticus DNA, BAC clone: B6Ng01-053J20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaagaaaaaaataattcaagcatggtttatccatgattgtgaa
aataagtttaatattagccactatggttagcaagaaagttttaacccctc
tcagggaagttctcagtgaaatgagggaggaatccttcatacatcgagag
cagtagaagcacacctcaatgttcttctgcttgaagaaaagatggctcta
tgtttatggcagtggtttggggtaagaccagaaagtatatgaatgaatct
tcattgaaggctgcaaagtgtgtggttaatatctaaataaatgttaatca
agcataaaatgaaaccaaccaatcaacatcaagagaaccactctagaggg
gaactttatcatccacatttaatgaaagtaggttacacccattcctatct
atccaaatggttgtgcaatggattcactcagtccttttagtgccttgtat
atttactttacctcataaaagccaatctgtaaccttatcctgctgagtga
acaacttttcgtaagtagaaatcaatttaagccacaaggaatccatcaat
ctcttgttagacctgtcatttatccagttataaatatatttgattatatt
tgcccccaatcatgaaagggacattgcttcttggaataaacacttagcta
tgtatctgtctaattttttctaccagtatttcaatggcatattggatgat
tttgtaccaccatggtataccatgtgtgaaaatagacagtatcctcatga
tctgaatgtgtgctttcaatttatctcgaaacttaattgtcattatgatg
tcattgtatttaagatgtgaaatagcaaccatggggtcttgcaaatatta
tgtctcagctggtgatggtattttgagggctgttgactctttttgagata
gtaggtagtgtggaataaccctggagtcatagttggactaattggtctgc
tttctgtttctgtaatatgttacaggacttcaccacatgtttccaccact
atggggttttacataactttcctccgagacacaccaatattcaaacacca
acccaatagatctctctcctatgttttcactggaaggtaggttg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattcatatactagcaagattttatcgaaag
gacccagatttagctgtctcttgtgagactatgccgggcctagcaaacac
agaagtggatgctcacagtcagctaatggatggatcacagggcttccaat
ggaggagctagagaagtatccaaggagctaaagggatcttcaccctatag
gtggaacaacatttatgacttaccagtaccctggactctgactctagctg
catatgtatcaaaaagatgctagtcgcattcttgaaagagaggcccattg
acacccaaacttttgtgtgtcccggttcagggaatgcctagggccaaagt
gatgagagtgggtgtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_14305776_14306877
seq2: B6Ng01-053J20.b_46_1139

seq1  GAATTCTAAAGAAAAAAATAATTCAAGCATGGTTTATCCATGATTGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGAAAAAAATAATTCAAGCATGGTTTATCCATGATTGTGAA  50

seq1  AATAAGTTTAATATTAGCCACTATGGTTAGCAAGAAAGTTTTAACCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTTTAATATTAGCCACTATGGTTAGCAAGAAAGTTTTAACCCCTC  100

seq1  TCAGGGAAGTTCTCAGTGAAATGAGGGAGGAATCCTTCATACATCGAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAGTTCTCAGTGAAATGAGGGAGGAATCCTTCATACATCGAGAG  150

seq1  CAGTAGAAGCACACCTCAATGTTCTTCTGCTTGAAGAAAAGATGGCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAAGCACACCTCAATGTTCTTCTGCTTGAAGAAAAGATGGCTCTA  200

seq1  TGTTTATGGCAGTGGTTTGGGGTAAGACCAGAAAGTATATGAATGAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGGCAGTGGTTTGGGGTAAGACCAGAAAGTATATGAATGAATCT  250

seq1  TCATTGAAGGCTGCAAAGTGTGTGGTTAATATCTAAATAAATGTTAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAGGCTGCAAAGTGTGTGGTTAATATCTAAATAAATGTTAATCA  300

seq1  AGCATAAAATGAAACCAACCAATCAACATCAAGAGAACCACTCTAGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAAATGAAACCAACCAATCAACATCAAGAGAACCACTCTAGAGGG  350

seq1  GAACTTTATCATCCACATTTAATGAAAGTAGGTTACACCCATTCCTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTATCATCCACATTTAATGAAAGTAGGTTACACCCATTCCTATCT  400

seq1  ATCCAAATGGTTGTGCAATGGATTCACTCAGTCCTTTTAGTGCCTTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAATGGTTGTGCAATGGATTCACTCAGTCCTTTTAGTGCCTTGTAT  450

seq1  ATTTACTTTACCTCATAAAAGCCAATCTGTAACCTTATCCTGCTGAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTTACCTCATAAAAGCCAATCTGTAACCTTATCCTGCTGAGTGA  500

seq1  ACAACTTTTCGTAAGTAGAAATCAATTTAAGCCACAAGGAATCCATCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTTCGTAAGTAGAAATCAATTTAAGCCACAAGGAATCCATCAAT  550

seq1  CTCTTGTTAGACCTGTCATTTATCCAGTTATAAATATATTTGATTATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTAGACCTGTCATTTATCCAGTTATAAATATATTTGATTATATT  600

seq1  TGCCCCCAATCATGAAAGGGACATTGCTTCTTGGAATAAACACTTAGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCAATCATGAAAGGGACATTGCTTCTTGGAATAAACACTTAGCTA  650

seq1  TGTATCTGTCTAATTTTTTCTACCAGTATTTCAATGGCATATTGGATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTGTCTAATTTTTTCTACCAGTATTTCAATGGCATATTGGATGAT  700

seq1  TTTGTACCACCATGGTATACCATGTGTGAAAATAGACAGTATCCTCATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACCACCATGGTATACCATGTGTGAAAATAGACAGTATCCTCATGA  750

seq1  TCTGAATGTGTGCTTTCAATTTATCTCGAAACTTAATTGTCATTATGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGTGTGCTTTCAATTTATCTCGAAACTTAATTGTCATTATGATG  800

seq1  TCATTGTATTTAAGATGTGAAATAGCAACCATGGGGTCTTGCAAATATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTATTTAAGATGTGAAATAGCAACCATGGGGTCTTGCAAATATTA  850

seq1  TGTCTCAGCTGGTGATGGTATTTTGAGGGCTGTTGACTCTTTTTGAGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAGCTGGTGATGGTATTTTGAGGGCTGTTGACTCTTTTTGAGATA  900

seq1  GTAGGTTAGTGTGGAATAAACCTTGGAGTCATAGTTGGACTAATTGGTCT  950
      ||||| ||||||||||| |||| |||||||||||||||||||||||||||
seq2  GTAGG-TAGTGTGGAAT-AACCCTGGAGTCATAGTTGGACTAATTGGTCT  948

seq1  GCTTTCTGTTTCTGTAATATGTTACAGGACTTCAACCACATGTTTCCACC  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCTTTCTGTTTCTGTAATATGTTACAGGACTTC-ACCACATGTTTCCACC  997

seq1  ACTATGGGGTTTACCATACTTTCCCTCCCAGACACACCATAATTCAAAAC  1050
      ||||||||||||  ||||  || ||||| ||||||||||  |||| ||||
seq2  ACTATGGGGTTTTACATAACTTTCCTCCGAGACACACCAATATTC-AAAC  1046

seq1  ACCAACCCAAATAGATCTCTCTTCCCTTATGTTTTCACTGGAAGGTAGGT  1100
      |||||||| |||||||||||||   | |||||||||||||||||||||||
seq2  ACCAACCC-AATAGATCTCTCT---CCTATGTTTTCACTGGAAGGTAGGT  1092

seq1  TG  1102
      ||
seq2  TG  1094