BAC Information

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BAC

Clone NameB6Ng01-054A12
Chromosome12 (Build37)
Map Location 24,983,584 - 24,984,759
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043440, EG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701, LOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710
Downstream geneLOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054A12.bB6Ng01-054A12.g
ACCDH876899DH876900
length1,2511,162
definitionDH876899|Mus musculus domesticus DNA, BAC clone: B6Ng01-054A12, 5' end.DH876900|Mus musculus domesticus DNA, BAC clone: B6Ng01-054A12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaagggctgagaagcacctgaaaaaatgttcaacatccttaat
tgttggaaatgtaaatcaaaacaaccctgagattccacctcacaccagtc
agaatggttaagatcaaaaattcagatgctgaatggatgctggtgaggat
gtgaagaaagaggatcactcctccattgttgattggattgcaagctggta
agctgacccacgctaccgtctcgccagcaaaacacacgcagaccactcgg
atccttctgcagtacagctttaatacatctcgatagatgatcagcttcag
gagaggagacccagagagcagaaaacccttcccttttataggctgcgaaa
aaacggttggagacatgcaccactgggattggctgcccactatcagtcag
ttaacgccacgagaaaggcagggctcaggtaatggaacgataccctgacg
cctgtgcacattttactatgagcaaaggatgtcagcgccgtcttgtaacg
gcgactgtgagggcggctcctcacatctcccccttttcttttattttaga
agcaacaggccacccagtactgagagtggagatagaggtcaaatccccag
tgtgcaagcataggggccttacacaaaacctcctcccaggctcgtcaccc
ggaggggttttggtccgctcccgtgtcatttttcctgggggaaggacact
tggacactcaaccttcatacaagatgacatgtctccctagaataggctca
tcttatgccgcagagcccttctactgcagtgcttagccgtacaactctcc
caggctgctgaagcacactcactctatcccgtgcaatgagactagcctcg
tggggtgcaagagctgagtggccagtgacctattgcttaagtatcgataa
tcatatattggggggaggcaccatgctccaaagcaacaagcgcctgggtt
actaccatcctgtccctccttgtttgggctttaagtttgcagatcatcca
taatagagcagtacttcacgcacacagcactcgaacaatccacccccacc
cattctgagtaggagatgctgcagaatcaggtctttcgtcatgacagtca
gacgtgtcgatgacttgtaagacgcgatcctccgcttccgggagttcttg
ttcaaatttctatgtccattctgtacaatatagtgaaggccttggacggt
tattgttccttttaaacttccaatgtgtactaggagggtatacaaagcct
t
gaattcaggaccaaggcagtgatgggtttccttcaggccaagctagtatg
agaaagctgagggatacgtagagaggaaagggccagatttacaaacctca
gcttgaggtcagaagaatggactggtcacagacacccgggcctacagatt
tctttacatttctgaatttaatgtttttgcatgtgtatgcatatgcactg
tgcatgtgtatttccatattgtgggcacatgtgcatgtgtgggcagctca
agatagacattgggtgtctccctaccccactctccactgtatttattgag
gccagttctcctgaactgtagcttgctgattccaggtaagctagccaggc
agctggccctgaggatgtcccgtctgtctctcagatgctggaattacagg
taactgccatatctgcccagctattacatggttctagagatctgatttct
ggtcttcatgcttacatcgaacattttttttatgcactaagccattgtct
ccccacagccctgttttaaaaaattaaataaaatttaatttggtgtttaa
ataatgacagacccagaggaagctgcagctgggtccatgcatctgtcctt
caggttcacccctggtcctgtcctgcacagctacagtgatattgaagtca
gggatagggacactgctaccatccacacagctttgtcatatcatgattgt
gttctcgcacagacacatgcattctgtgtgcatggtatctgatgcagttt
cagagcttgtgtagatctgcgttgttactgtcactgatggctcttcctat
agttagaaaattgcagagaagattctgtggggaggcgaccatagggtctc
ctaataatgaaccttcctgccccatcctcggctctgtacccttccttcct
gccccatcctcctctctgtaccctttgtacaggcggctttctgctcaagc
tcacttctgagtaccctccccctgtggtccatcctgtggtaaataaccag
cttagaaatcacaatggactagttctaagctgtatttaccagaaagctac
cattttctagaaagcttgcaggcgtgtgcctaatttagctggatcaagga
aaatgactcatgattgtcgatatattaacgctccgctgatgctggagtga
ctctgagtccgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_24983584_24984759
seq2: B6Ng01-054A12.g_70_1231

seq1  GAATTCAGGACCAAGGCAGTGATGGGTTTCCTTCAGGCCAAGCTAGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCAAGGCAGTGATGGGTTTCCTTCAGGCCAAGCTAGTATG  50

seq1  AGAAAGCTGAGGGATACGTAGAGAGGAAAGGGCCAGATTTACAAACCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTGAGGGATACGTAGAGAGGAAAGGGCCAGATTTACAAACCTCA  100

seq1  GCTTGAGGTCAGAAGAATGGACTGGTCACAGACACCCGGGCCTACAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGGTCAGAAGAATGGACTGGTCACAGACACCCGGGCCTACAGATT  150

seq1  TCTTTACATTTCTGAATTTAATGTTTTTGCATGTGTATGCATATGCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACATTTCTGAATTTAATGTTTTTGCATGTGTATGCATATGCACTG  200

seq1  TGCATGTGTATTTCCATATTGTGGGCACATGTGCATGTGTGGGCAGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTATTTCCATATTGTGGGCACATGTGCATGTGTGGGCAGCTCA  250

seq1  AGATAGACATTGGGTGTCTCCCTACCCCACTCTCCACTGTATTTATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGACATTGGGTGTCTCCCTACCCCACTCTCCACTGTATTTATTGAG  300

seq1  GCCAGTTCTCCTGAACTGTAGCTTGCTGATTCCAGGTAAGCTAGCCAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTCTCCTGAACTGTAGCTTGCTGATTCCAGGTAAGCTAGCCAGGC  350

seq1  AGCTGGCCCTGAGGATGTCCCGTCTGTCTCTCAGATGCTGGAATTACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCCCTGAGGATGTCCCGTCTGTCTCTCAGATGCTGGAATTACAGG  400

seq1  TAACTGCCATATCTGCCCAGCTATTACATGGTTCTAGAGATCTGATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCCATATCTGCCCAGCTATTACATGGTTCTAGAGATCTGATTTCT  450

seq1  GGTCTTCATGCTTACATCGAACATTTTTTTTATGCACTAAGCCATTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCATGCTTACATCGAACATTTTTTTTATGCACTAAGCCATTGTCT  500

seq1  CCCCACAGCCCTGTTTTAAAAAATTAAATAAAATTTAATTTGGTGTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGCCCTGTTTTAAAAAATTAAATAAAATTTAATTTGGTGTTTAA  550

seq1  ATAATGACAGACCCAGAGGAAGCTGCAGCTGGGTCCATGCATCTGTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGACAGACCCAGAGGAAGCTGCAGCTGGGTCCATGCATCTGTCCTT  600

seq1  CAGGTTCACCCCTGGTCCTGTCCTGCACAGCTACAGTGATATTGAAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCACCCCTGGTCCTGTCCTGCACAGCTACAGTGATATTGAAGTCA  650

seq1  GGGATAGGGACACTGCTACCATCCACACAGCTTTGTCATATCATGATTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGGGACACTGCTACCATCCACACAGCTTTGTCATATCATGATTGT  700

seq1  GTTCTCGCACAGACACATGCATTCTGTGTGCATGGTATCTGATGCAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCGCACAGACACATGCATTCTGTGTGCATGGTATCTGATGCAGTTT  750

seq1  CAGAGCTTGTGTAGATCTGCGTTGTTACTGTCACTGATGGCTCTTCCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTTGTGTAGATCTGCGTTGTTACTGTCACTGATGGCTCTTCCTAT  800

seq1  AGTTAGAAAATTGCAGAGAAGATTCTGTGGGGAGGCGACCATAGGGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAAAATTGCAGAGAAGATTCTGTGGGGAGGCGACCATAGGGTCTC  850

seq1  CTAATAATGAACCTTCCTGCCCCATCCTCGGCTCTGTACCCTTCCTTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATGAACCTTCCTGCCCCATCCTCGGCTCTGTACCCTTCCTTCCT  900

seq1  GCCCCATCCTCCTCTCTGTACCCTTTGTACAGGCGGCTTTCTGCTCAAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATCCTCCTCTCTGTACCCTTTGTACAGGCGGCTTTCTGCTCAAGC  950

seq1  TCACTTCTGAGTACCCTCCCCCTGTGGTCCATCCTGTGGTAAATAACCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTGAGTACCCTCCCCCTGTGGTCCATCCTGTGGTAAATAACCAG  1000

seq1  CTTAGAAATCACAATGGACTAGTTTCTAAGCTGTATTTACCAGAAAAGGC  1050
      |||||||||||||||||||||| |||||||||||||||||||||||  ||
seq2  CTTAGAAATCACAATGGACTAG-TTCTAAGCTGTATTTACCAGAAA--GC  1047

seq1  TAC--ATGTCTAGAAGGCTTTGCAGGGCCGTGTGCTAATTTTAGCTTGGA  1098
      |||   | ||||||| || |||||||  |||||||  | |||||| ||||
seq2  TACCATTTTCTAGAAAGC-TTGCAGG--CGTGTGCCTAATTTAGC-TGGA  1093

seq1  TCAAAGAAAATGCACTTTCATGATTTGTCGATTATATTTAACAGCTGCAG  1148
      |||| ||||||| ||  |||||| ||||||| |||| ||||| ||| | |
seq2  TCAAGGAAAATG-AC--TCATGA-TTGTCGA-TATA-TTAAC-GCT-CCG  1135

seq1  CTGATGCTGGAGTGACTCTGAAGTCCGT  1176
      |||||||||||||||||||| |||||||
seq2  CTGATGCTGGAGTGACTCTG-AGTCCGT  1162