BAC Information

Click to search

BAC

Clone NameB6Ng01-055B17
Chromosome12 (Build37)
Map Location 39,626,669 - 39,627,304
singlet/doubletsinglet
Overlap geneLOC100043145
Upstream geneDgkb, LOC668824, LOC100043142, Etv1
Downstream geneLOC100043148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055B17.bB6Ng01-055B17.g
ACCDH877662DH877663
length6361,220
definitionDH877662|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B17, 5' end.DH877663|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacgatatgctgtctcctggacatgacatggttgttgcatccat
gaactcacagcatctctgtgaggagctgtaggcagttaatgtttgttgag
ggaggaagaatcttattcttcagtgctataaccaatgttaaattgtcctt
gctcaagtaaataacctccaactaggctcatggatgcaatcatactatat
acagtgcagtctctctctctctctctctctctctctctctctcgtgtaca
caaacacacacacacacactccaatacatgaaagtagaaagggagttcat
gactaagaagggaaggtataagatggtggtgataagatgagctaatgaga
tgaaactatgatcaaagttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgcgcgcgcgagagcgtgaaattgtgaaaggacacaaaaagttaaaga
caattaattttaaaattgtactctggttatgtaaaagaatattcacataa
ttaggaaataatactaatttgggttaaaggcaattattttttgcaatgtt
cctactttgagatgtttggaaattcacccactcaactgtaaagaaaacgt
gccaaaataataagtgctagtgatttgtggtaaaga
gaattcaaggcccatacctaaacataataaaagcaatctacaacaaacca
gaagtcaacatcaaagtagatggagagacgctggaagcaatcccactaaa
atcagggactagacaatgctgcccactttctccctacctgttcaatagac
tacttgaagttctagccagagcaattagacagcaaaaggatgtcaagggg
attcaaataatgaaagagagaagtcaaaagatcattatttgcagatgatg
tgatagtagatataagtgaccctaaaaattccaccagagaactcctaaac
ctgataaatatctggatataaaattaactcaaacaaatcaatggtctttc
tctacacaaaggataaaccgactgagaaagaaattagggaaacaaccact
tcacaagagtaaaaattaatataaaaaaccttggtgtgactctaaccaag
gaaatgaaagatctgtatgataagatcttcaagtctctgaagaaagaaat
caaagaagatctcagaagatggaaagattgcctatgctcatggattggca
gtatctctatagtgaaaatggctatcttgccaaaagcaatctacagattc
aatgcaatccccatcaaatttccaactcaattcttcaacgaattagaaag
ggcaatttgcaaattcatctggaataactaaaaacctagcaaaaactctt
ctcaatgataaaagaatctctagtggaatcaccatgccagtcctaaagct
gttctacagagcaattgtggtaaaaaaaaaaaaaaaacaaaaaaacatgg
tactgtgacagaaacagacaggtagaccaatggaatagaattgaagaccc
agaaatgaacccacacaccgattgtcacttgatctttgacaagggagcta
aaaccatccagtggaaaaagacagcactttcacaaatggtgctggcacac
tggcggttatcatgtagagatatgagttgatccattcttatctccttgta
ctaagtcaatctacatggatcaggaactcacataaacagagaaactgaaa
ctatagaggagaaagtgggaaactcgaagattgggcacaggggaaaagct
gataggaagcatgcctggcttaagatcagaatgaaatgaccttaatgcaa
gctcgtagcaagacctgtcatagacaaaggccacaacgatgtacgatctt
tcacactctagaccagatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39626669_39627304
seq2: B6Ng01-055B17.b_47_682

seq1  GAATTCTACGATATGCTGTCTCCTGGACATGACATGGTTGTTGCATCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACGATATGCTGTCTCCTGGACATGACATGGTTGTTGCATCCAT  50

seq1  GAACTCACAGCATCTCTGTGAGGAGCTGTAGGCAGTTAATGTTTGTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCACAGCATCTCTGTGAGGAGCTGTAGGCAGTTAATGTTTGTTGAG  100

seq1  GGAGGAAGAATCTTATTCTTCAGTGCTATAACCAATGTTAAATTGTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGAATCTTATTCTTCAGTGCTATAACCAATGTTAAATTGTCCTT  150

seq1  GCTCAAGTAAATAACCTCCAACTAGGCTCATGGATGCAATCATACTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGTAAATAACCTCCAACTAGGCTCATGGATGCAATCATACTATAT  200

seq1  ACAGTGCAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTACA  250

seq1  CAAACACACACACACACACTCCAATACATGAAAGTAGAAAGGGAGTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACACACACACACTCCAATACATGAAAGTAGAAAGGGAGTTCAT  300

seq1  GACTAAGAAGGGAAGGTATAAGATGGTGGTGATAAGATGAGCTAATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGAAGGGAAGGTATAAGATGGTGGTGATAAGATGAGCTAATGAGA  350

seq1  TGAAACTATGATCAAAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTATGATCAAAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400

seq1  TGTGTGTGCTCGCATGCATGAAATTGTGAAAGGACACAAAAAGTTAAAGA  450
      |||| | || ||   || ||||||||||||||||||||||||||||||||
seq2  TGTGCGCGCGCGAGAGCGTGAAATTGTGAAAGGACACAAAAAGTTAAAGA  450

seq1  CAATTAATTTTAAAATTGTACTCTGGTTATGTAAAAGAATATTCACATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATTTTAAAATTGTACTCTGGTTATGTAAAAGAATATTCACATAA  500

seq1  TTAGGAAATAATACTAATTTGGGTTAAAGGCAATTATTTTTTGCAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAATAATACTAATTTGGGTTAAAGGCAATTATTTTTTGCAATGTT  550

seq1  CCTACTTTGAGATGTTTGGAAATTCACCCACTCAACTGTAAAGAAAACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTTGAGATGTTTGGAAATTCACCCACTCAACTGTAAAGAAAACGT  600

seq1  GCCAAAATAATAAGTGCTAGTGAATTGTGGTAAAGA  636
      ||||||||||||||||||||||| ||||||||||||
seq2  GCCAAAATAATAAGTGCTAGTGATTTGTGGTAAAGA  636