BAC Information

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BAC

Clone NameB6Ng01-055C17
Chromosome12 (Build37)
Map Location 39,811,862 - 39,813,003
singlet/doubletsinglet
Overlap genenone
Upstream geneDgkb, LOC668824, LOC100043142, Etv1, LOC100043145
Downstream geneLOC100043148, Arl4a, LOC100043606, Scin
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055C17.bB6Ng01-055C17.g
ACCDH877705DH877706
length1,1351,028
definitionDH877705|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C17, 5' end.DH877706|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccactcctccagaattgtatctgcctgcatgttttccgtgata
atgaaaatggacgtttttttcccctttgagaatttaattaatttatttaa
tttatttatttttcattagatattttcttttatacatttcaaatgctatc
ccaaatgttccctatagcctcccccagtcctgctcccctacccacttact
cctgcttcttggccctggcattcccctgtactggggcatataaagtttgc
aataccaaggggcctctcttcccagtgatggcctctgaaactgtaagtca
gccccaattcaatgctttcccttataagagttatcattgtcctgatctgt
cttcacagcaataacttaagaataaaccctaactaagggggaaatctagc
cgtaactcagtggtgtctgacatcaagaaataaacaacatggaagaaata
caaatgcatatgatataggagtgttttccagtgcatgtgattatgtgata
gactaagttaaagagcaaactgaagcaacagtagatgctaataggattct
tttcctctaataataattatgatataatttttgactgaaagcatactgta
aaggagagttaattatctcatgggcccataaagttgaataactttctcaa
caactccttgcagatacagtcatgttagataagcacccatttattgtcac
tacatcgtagggctcagcccttaggaaatcaccttctgtaaaggaagcac
aatccagtgtatatatagttattttacccacaaatcttagtttgtactga
cagaaacagtgtcagacatttataccagagtaaccacctttcacttaaaa
atccatgtgtgtgctcacacacacatttatttcaatattacttcaaaata
tactccccttgaactattgtcagtgacttggtgatgatagaaatcatctc
gtaaagtggcaggctctttgcctcaaatctaacaaacctatacttctgga
ggctatagcagattttttttcttttttttactctttctctcaatacatgc
ttcagaactgcagtttccccttctcactcctcctcatttccccctctccc
tggaatccactggctctcattttcttcagaaaagg
gaattcctttcttgctttttctaggttatagtttccatatttgtgttggt
attttccctttattatcctttgaagggctggattcgtggaaagatattgt
gtgaatttggttttgtcatggaatactttggtttcttcatctttggtaat
agagagtttttttgggtatagtagcctgagctggcatttatgttctcttt
ctgtctgtataacttctgtccaggatcttctggctttcctagtctctggt
gagaagtctggagtaattctaataggcctgcctttatatgttacttgacc
tttttcccttactgtttttaatattctgtctttatttagtacatttgttg
atctgattattatgtgttgggaggaatttcttttctggtccagtctattt
ggagttctgtaggcttcttgtatgttcatgggaatctctttctttaggtt
tgggacattttcttctataattttgttgaagatgtttgctggccctttaa
gttcaaaatcttcattctcatctactcctatcatctgtaggtttgttctt
ctcattgtgtcctggatttcttggatgttttgagttaggatctttttgca
ttttgcattttgacttttgtgtccattttacctatggaatcttctgcacc
tgagattctctcttccatttcttatattctgttgctgaagatcgcttcta
tgtttcctgatttctttcctagggtttctatctccagagttgtctccctt
tctgttttctgtattgtttctacttccatttttagatcctggatggtttt
gttcaattccatcacctgtttggtagctttttctgtaactctctaaggga
tttttttgtttcctctttgaaagttttaactgtctaccttgtgttttcta
tatttccttcttaaagtcctccatcatcatcacgagaaaggactttagat
tcatgtctctgctttcggtgtgatggggattcagaacttgctatggtgga
aagttagttctatgatagccaatacctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_39811862_39813003
seq2: B6Ng01-055C17.b_47_1181 (reverse)

seq1  CCTTTTCTGAAGAAAAATGAAGGAG-CAGTGGATCCAGGGGAGAGGGGGG  49
      |||||||||||| |||||||  ||| |||||||| |  |||||| |||||
seq2  CCTTTTCTGAAG-AAAATGA--GAGCCAGTGGATTCCAGGGAGA-GGGGG  46

seq1  AATTGAGGAGGAGTGGAGAAAGGGGAAACTGCAGTCTGGAGGCATTGTA-  98
      || ||||||||||| ||| ||||||||||||||||   || ||| |||| 
seq2  AAATGAGGAGGAGT-GAG-AAGGGGAAACTGCAGTTCTGAAGCA-TGTAT  93

seq1  TGAGAG-AAGAGTAAATAAAAAGAAAAAAAAATCTGCTATAGCCTCCAG-  146
      |||||| ||||||||| |||||| ||||||||||||||||||||||||| 
seq2  TGAGAGAAAGAGTAAA-AAAAAG-AAAAAAAATCTGCTATAGCCTCCAGA  141

seq1  AGTATAGGTTTGTTAGATTGTGAGGCAAAGAGCCTGCCACTTTACGAGAT  196
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTATAGGTTTGTTAGATT-TGAGGCAAAGAGCCTGCCACTTTACGAGAT  190

seq1  GATTTCTATCATTCACCAAGTCACTGACAATAGTTCAAGGGGAGTATATT  246
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTATCA-TCACCAAGTCACTGACAATAGTTCAAGGGGAGTATATT  239

seq1  TTGAAGTAATATTGAAATAAATGTGTGTGTGAGCACACACATGGATTTTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTAATATTGAAATAAATGTGTGTGTGAGCACACACATGGATTTTT  289

seq1  AAGTGAAAGGTGGTTACTCTGGTATAAATGTCTGACACTGTTTCTGTCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAAGGTGGTTACTCTGGTATAAATGTCTGACACTGTTTCTGTCAG  339

seq1  TACAAACTAAGATTTGTGGGTAAAATAACTATATATACACTGGATTGTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTAAGATTTGTGGGTAAAATAACTATATATACACTGGATTGTGC  389

seq1  TTCCTTTACAGAAGGTGATTTCCTAAGGGCTGAGCCCTACGATGTAGTGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTACAGAAGGTGATTTCCTAAGGGCTGAGCCCTACGATGTAGTGA  439

seq1  CAATAAATGGGTGCTTATCTAACATGACTGTATCTGCAAGGAGTTGTTGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGGGTGCTTATCTAACATGACTGTATCTGCAAGGAGTTGTTGA  489

seq1  GAAAGTTATTCAACTTTATGGGCCCATGAGATAATTAACTCTCCTTTACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTATTCAACTTTATGGGCCCATGAGATAATTAACTCTCCTTTACA  539

seq1  GTATGCTTTCAGTCAAAAATTATATCATAATTATTATTAGAGGAAAAGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTTTCAGTCAAAAATTATATCATAATTATTATTAGAGGAAAAGAA  589

seq1  TCCTATTAGCATCTACTGTTGCTTCAGTTTGCTCTTTAACTTAGTCTATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTAGCATCTACTGTTGCTTCAGTTTGCTCTTTAACTTAGTCTATC  639

seq1  ACATAATCACATGCACTGGAAAACACTCCTATATCATATGCATTTGTATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATCACATGCACTGGAAAACACTCCTATATCATATGCATTTGTATT  689

seq1  TCTTCCATGTTGTTTATTTCTTGATGTCAGACACCACTGAGTTACGGCTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATGTTGTTTATTTCTTGATGTCAGACACCACTGAGTTACGGCTA  739

seq1  GATTTCCCCCTTAGTTAGGGTTTATTCTTAAGTTATTGCTGTGAAGACAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCCCCTTAGTTAGGGTTTATTCTTAAGTTATTGCTGTGAAGACAG  789

seq1  ATCAGGACAATGATAACTCTTATAAGGGAAAGCATTGAATTGGGGCTGAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGACAATGATAACTCTTATAAGGGAAAGCATTGAATTGGGGCTGAC  839

seq1  TTACAGTTTCAGAGGCCATCACTGGGAAGAGAGGCCCCTTGGTATTGCAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTTTCAGAGGCCATCACTGGGAAGAGAGGCCCCTTGGTATTGCAA  889

seq1  ACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGCAGGAGTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAGAAGCAGGAGTA  939

seq1  AGTGGGTAGGGGAGCAGGACTGGGGGAGGCTATAGGGAACATTTGGGATA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTAGGGGAGCAGGACTGGGGGAGGCTATAGGGAACATTTGGGATA  989

seq1  GCATTTGAAATGTATAAAAGAAAATATCTAATGAAAAATAAATAAATTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGAAATGTATAAAAGAAAATATCTAATGAAAAATAAATAAATTAA  1039

seq1  ATAAATTAATTAAATTCTCAAAGGGGAAAAAAACGTCCATTTTCATTATC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAATTAAATTCTCAAAGGGGAAAAAAACGTCCATTTTCATTATC  1089

seq1  ACGGAAAACATGCAGGCAGATACAATTCTGGAGGAGTGGAGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAAAACATGCAGGCAGATACAATTCTGGAGGAGTGGAGAATTC  1135