BAC Information

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BAC

Clone NameB6Ng01-056D17
Chromosome12 (Build37)
Map Location 98,550,026 - 98,550,965
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628277
Downstream geneLOC382626, LOC100039743, LOC667732, LOC628351, LOC100039770, LOC667746, Galc, Gpr65
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056D17.bB6Ng01-056D17.g
ACCDH878458DH878459
length885943
definitionDH878458|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D17, 5' end.DH878459|Mus musculus domesticus DNA, BAC clone: B6Ng01-056D17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaattaactttcccaaacccaaattaatccaattaagaaat
ggggtacagttaaagagagtactcacaacaaaagaatcttgaatggccaa
gaagcacttaaagaaatgttcaaaatactttgtcatcaaagaaatgcaaa
taaaatcatcctgagattctacctcacaccaatcagaatggctaagatca
aaaactcaagtggaggaagaggaacacttctccattgctgcttggactgc
aagctgaaataaccattctgaaatcaatctggtggttcctcagaaaattg
gaaataactcttcctgaagacccagctataccatttactcaaaagatgtc
ccaccataccccgaggactccttccccaccattctcatagcagccttttt
tgtgatagcctgaagctggaagcaatccagatgtccctcaactgaaaaat
ggatacaaaaaatgtggttcatttacacaatgaatactgctcagctatta
aaaacaaggccatcctgagttttgcagcaaatggatgtaactagaaaata
ttatccttcatgaggtaactcagactcaaaaggacatacatggtatgcac
tcattgattagaggatattaaccaaacagtacagaatacctaggatacaa
gcaacagaccataagaaatgtaacaagtagaaaggccctagtgaagatgt
ttcaattctacttagcaggggagaggaaataatcatgggaggcagaggga
gggaggaacctaggtggaagagggaagggtgtgtgtatgtgtgcaaaggg
aacaggatcaggtatggggaacaggagaatagctcagagggtcaagaaaa
tgaatggagatagctgcatcagaaggtgggcagtg
gaattctggtttggcatggaagatttttttggaagatttttatgtagtat
tattaaaaccagctgagcagtatgtcattactattcaataccttgagcaa
gcaatgaggaagggaaaaatctatggttgtctccactccccctcagttac
ttttgtggaataaatgtgactcccaggccacgtgacaaaactccctagac
agtaaatggtgttgatgagaaatgttccttaaatcagtaatggagttaaa
atatactacaggcaggtaatgcaagaggaggcagaagctaaagggaggga
tttttttttttataggcactgcgatgtacaacattagaaatatggcgagc
aagtccatttaaaagttggaaatgcattaactcccagcctagaaagtaac
aggaaccgaagtgtttacccagcatccctcatttcctctttgtaccaagc
tctaaggaagggggaagagactgactgtcaacaaagccatcctttcattt
ctccagtcctccacaaggagagactggggattctgggtgggatttgaacc
tgtcagtcccactgcacctacctaaaacagaataaaaatagccccttttg
tttatatttcattagcagtctgacgcccatttactaacacttaaatcaag
gtcttttacagatccagagatggtggagggcttaaaattgccttttccct
tctgccataggctccgagtcctcagttaacatagacttgattttatgtga
attatttaagtcaacactgggccccccgctctcctcttgaccaacgctct
gatttgtagatttactgccctttctgtacatcaggatcattgtgttttta
acagtacttttcttttttaaaaaggcatctttaaaatccatatttcttta
agaatgcaatttaaatcatttttctgtgaattcttctgttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_98550026_98550965
seq2: B6Ng01-056D17.g_72_1014

seq1  GAATTCTGGTTTGGCATGGAAGATTTTTTTGGAAGATTTTTATGTAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTTTGGCATGGAAGATTTTTTTGGAAGATTTTTATGTAGTAT  50

seq1  TATTAAAACCAGCTGAGCAGTATGTCATTACTATTCAATACCTTGAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAACCAGCTGAGCAGTATGTCATTACTATTCAATACCTTGAGCAA  100

seq1  GCAATGAGGAAGGGAAAAATCTATGGTTGTCTCCACTCCCCCTCAGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGGAAGGGAAAAATCTATGGTTGTCTCCACTCCCCCTCAGTTAC  150

seq1  TTTTGTGGAATAAATGTGACTCCCAGGCCACGTGACAAAACTCCCTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGGAATAAATGTGACTCCCAGGCCACGTGACAAAACTCCCTAGAC  200

seq1  AGTAAATGGTGTTGATGAGAAATGTTCCTTAAATCAGTAATGGAGTTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGGTGTTGATGAGAAATGTTCCTTAAATCAGTAATGGAGTTAAA  250

seq1  ATATACTACAGGCAGGTAATGCAAGAGGAGGCAGAAGCTAAAGGGAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTACAGGCAGGTAATGCAAGAGGAGGCAGAAGCTAAAGGGAGGGA  300

seq1  TTTTTTTTTTTATAGGCACTGCGATGTACAACATTAGAAATATGGCGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTATAGGCACTGCGATGTACAACATTAGAAATATGGCGAGC  350

seq1  AAGTCCATTTAAAAGTTGGAAATGCATTAACTCCCAGCCTAGAAAGTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCATTTAAAAGTTGGAAATGCATTAACTCCCAGCCTAGAAAGTAAC  400

seq1  AGGAACCGAAGTGTTTACCCAGCATCCCTCATTTCCTCTTTGTACCAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCGAAGTGTTTACCCAGCATCCCTCATTTCCTCTTTGTACCAAGC  450

seq1  TCTAAGGAAGGGGGAAGAGACTGACTGTCAACAAAGCCATCCTTTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGAAGGGGGAAGAGACTGACTGTCAACAAAGCCATCCTTTCATTT  500

seq1  CTCCAGTCCTCCACAAGGAGAGACTGGGGATTCTGGGTGGGATTTGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCCTCCACAAGGAGAGACTGGGGATTCTGGGTGGGATTTGAACC  550

seq1  TGTCAGTCCCACTGCACCTACCTAAAACAGAATAAAAATAGCCCC-TTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGTCAGTCCCACTGCACCTACCTAAAACAGAATAAAAATAGCCCCTTTTG  600

seq1  TTTATATTTCATTAGCAGTCTGACGCCCATTTACTAACACTT-AATCAAG  648
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTATATTTCATTAGCAGTCTGACGCCCATTTACTAACACTTAAATCAAG  650

seq1  GTCTTTTACAGATCCAGAGATGGTGGAGGGCTTAAAATTGCC-TTTCCCT  697
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTCTTTTACAGATCCAGAGATGGTGGAGGGCTTAAAATTGCCTTTTCCCT  700

seq1  TCTGCCATAGGCTCCGAGTCCTCAGTTAACATAGACTTGA-TTTATGTGA  746
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGCCATAGGCTCCGAGTCCTCAGTTAACATAGACTTGATTTTATGTGA  750

seq1  ATTATTTTAAGTCAACACTGGGCCCCCCGCTCTCCTCTTGACCAACGCTC  796
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTA-TTTAAGTCAACACTGGGCCCCCCGCTCTCCTCTTGACCAACGCTC  799

seq1  TGATTTGTAGATTTACTGCCCTTTCTGTACATCAGGATCATTGTGTTTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTAGATTTACTGCCCTTTCTGTACATCAGGATCATTGTGTTTTT  849

seq1  ACAAGTAC-TTTCTTTTTTAAAAAGGCATCTTTAAAATCCATATTTCTTT  895
      |  ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTACTTTTCTTTTTTAAAAAGGCATCTTTAAAATCCATATTTCTTT  899

seq1  AAGAATGCAATTTAAATCATTTTTCTGTTGAATTCTTCTGTTAAA  940
      ||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGAATGCAATTTAAATCATTTTTCTG-TGAATTCTTCTGTTAAA  943