BAC Information

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BAC

Clone NameB6Ng01-056F02
Chromosome12 (Build37)
Map Location 25,661,430 - 25,781,995
singlet/doubletdoublet
Overlap geneC330002I19Rik, Id2
Upstream geneLOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397
Downstream geneLOC100042973, LOC100042974, LOC668726
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056F02.bB6Ng01-056F02.g
ACCDH878512DH878513
length801823
definitionDH878512|Mus musculus domesticus DNA, BAC clone: B6Ng01-056F02, 5' end.DH878513|Mus musculus domesticus DNA, BAC clone: B6Ng01-056F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,781,198 - 25,781,995)(25,661,430 - 25,662,245)
sequence
gaattcagaattaaagcattggagtcaagagctctaaactttttcaaaat
gtggctgcatctaggaagggtgctgaaagattccaaacctcgtacgtaac
agaattttcttttaaaaacagcgataagctgtcagtcaatagctaggacc
acctacctgacaaagagcttcccaagagctctaagtgttggaatgtgaca
ccagaaatcacgatttgtgcataattaatcgcatcactttgccacctaca
ctgaagggcacagaccaagggcagtgtatgtaaatgtagttccagtgtgc
aaaccccactaatgaccttcgattaatggagtcattatagtaaccctgcc
tcattcttgggggtggggggagttccgaatgcaccgggtccctcggggct
cctctgcggtctgagggagaccgcacagtgttcctacaattcgtgtcact
gagtttccgagaaggcctcccgcgttgctccaagttgcaaagcttcacgc
taaacctgtcgtggacgtgtatgtgggtaggttccccccccctccccaaa
tagctttcctttatcttaaaagaaggaacactacaaatgtgacttcccaa
aagcgcgcttcttttcccttctgccacggtcgctgtcttccctaacgcta
gcgacctgtgacttcccgtctgctgtgcggagagagtggggctgctggaa
gtcctgggggcgggtatagctagctccgggcacactccccggggcagggg
tcctgccagctctggtaaatgggaataatgccgggcacaattgcacactc
a
gaattctatttggttaaacgtaatgtcttgcatttcttttccactttaat
tgcctgattcctttcctgtaggctgtctgttttggtccctaacttgtgcc
tagagttctgattctttttttttttttttaagtctatattgtgtatgcat
gcactgctaaattatatttttctatatatgatcccgtgtgagcctgccat
ccccttttccagcttttgttgaagaatgtcagttttatttttcttcactg
aattcctgaatgtttggaaggcacaagcagaaaccttggggaaaggaggc
ttctggggttgaggagaggtcagaatcctgggtagcttgatgacctgtgt
ctcaggggccacactgaggccgcactgacgaagagactttctctgttcat
agctgtaagctcactctctgatgattgtggttttacttacacagcatcaa
tcgtggcctggacagttgtgtttttaaagatgcatttattgcatttacat
gagtacactgtcactctcttcagacacaccaggagaggacaccagatacc
attacaatagttgtgagccaccatgtggttgctgggaattgaactcagga
cctctggaagagcagccagttagtgttcttaaccaccgagccatctctcc
agccctgacctggacagtttttaattccaattctggactggcccagctta
tctttttgagtgttcacatgtacagattgtttgttatagccttgtgtgcg
gcttatggtagagagtaatgctgttgaagggtgaaagggctctctctgtg
gacaatgacacccaaaagaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_25781198_25781995
seq2: B6Ng01-056F02.b_45_845 (reverse)

seq1  TGAGTGTGCAATTGTGCCC-GCCTTATT-CCAATTCCCAGAGCTGGCAGG  48
      ||||||||||||||||||| || ||||| ||| || ||||||||||||||
seq2  TGAGTGTGCAATTGTGCCCGGCATTATTCCCATTTACCAGAGCTGGCAGG  50

seq1  ACCCCTGCCCCGGGG-GTGTGCCCGGAGCTAGCTATACCCGCCCCCAGGA  97
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACCCCTGCCCCGGGGAGTGTGCCCGGAGCTAGCTATACCCGCCCCCAGGA  100

seq1  CTTCCAGCAGCCCCACTCTCTCCGCACAGCAGACGGGAAGTCACAGGTCG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGCAGCCCCACTCTCTCCGCACAGCAGACGGGAAGTCACAGGTCG  150

seq1  CTAGCGTTAGGGAAGACAGCGACCGTGGCAGAAGGGAAAAGAAGCGCGCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCGTTAGGGAAGACAGCGACCGTGGCAGAAGGGAAAAGAAGCGCGCT  200

seq1  TTTGGGAAGTCACATTTGTAGTGTTCCTTCTTTTAAGATAAAGGAAAGCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAAGTCACATTTGTAGTGTTCCTTCTTTTAAGATAAAGGAAAGCT  250

seq1  ATTTGGGGAGGGGGGGGGAACCTACCCACATACACGTCCACGACAGGTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGGAGGGGGGGGGAACCTACCCACATACACGTCCACGACAGGTTT  300

seq1  AGCGTGAAGCTTTGCAACTTGGAGCAACGCGGGAGGCCTTCTCGGAAACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGAAGCTTTGCAACTTGGAGCAACGCGGGAGGCCTTCTCGGAAACT  350

seq1  CAGTGACACGAATTGTAGGAACACTGTGCGGTCTCCCTCAGACCGCAGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACACGAATTGTAGGAACACTGTGCGGTCTCCCTCAGACCGCAGAG  400

seq1  GAGCCCCGAGGGACCCGGTGCATTCGGAACTCCCCCCACCCCCAAGAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCCGAGGGACCCGGTGCATTCGGAACTCCCCCCACCCCCAAGAATG  450

seq1  AGGCAGGGTTACTATAATGACTCCATTAATCGAAGGTCATTAGTGGGGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGTTACTATAATGACTCCATTAATCGAAGGTCATTAGTGGGGTT  500

seq1  TGCACACTGGAACTACATTTACATACACTGCCCTTGGTCTGTGCCCTTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACTGGAACTACATTTACATACACTGCCCTTGGTCTGTGCCCTTCA  550

seq1  GTGTAGGTGGCAAAGTGATGCGATTAATTATGCACAAATCGTGATTTCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGGTGGCAAAGTGATGCGATTAATTATGCACAAATCGTGATTTCTG  600

seq1  GTGTCACATTCCAACACTTAGAGCTCTTGGGAAGCTCTTTGTCAGGTAGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACATTCCAACACTTAGAGCTCTTGGGAAGCTCTTTGTCAGGTAGG  650

seq1  TGGTCCTAGCTATTGACTGACAGCTTATCGCTGTTTTTAAAAGAAAATTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTAGCTATTGACTGACAGCTTATCGCTGTTTTTAAAAGAAAATTC  700

seq1  TGTTACGTACGAGGTTTGGAATCTTTCAGCACCCTTCCTAGATGCAGCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACGTACGAGGTTTGGAATCTTTCAGCACCCTTCCTAGATGCAGCCA  750

seq1  CATTTTGAAAAAGTTTAGAGCTCTTGACTCCAATGCTTTAATTCTGAATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGAAAAAGTTTAGAGCTCTTGACTCCAATGCTTTAATTCTGAATT  800

seq1  C  798
      |
seq2  C  801

seq1: chr12_25661430_25662245
seq2: B6Ng01-056F02.g_68_890

seq1  GAATTCTATTTGGTTAAACGTAATGTCTTGCATTTCTTTTCCACTTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTGGTTAAACGTAATGTCTTGCATTTCTTTTCCACTTTAAT  50

seq1  TGCCTGATTCCTTTCCTGTAGGCTGTCTGTTTTGGTCCCTAACTTGTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATTCCTTTCCTGTAGGCTGTCTGTTTTGGTCCCTAACTTGTGCC  100

seq1  TAGAGTTCTGATTCTTTTTTTTTTTTTTTAAGTCTATATTGTGTATGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTCTGATTCTTTTTTTTTTTTTTTAAGTCTATATTGTGTATGCAT  150

seq1  GCACTGCTAAATTATATTTTTCTATATATGATCCCGTGTGAGCCTGCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCTAAATTATATTTTTCTATATATGATCCCGTGTGAGCCTGCCAT  200

seq1  CCCCTTTTCCAGCTTTTGTTGAAGAATGTCAGTTTTATTTTTCTTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTTCCAGCTTTTGTTGAAGAATGTCAGTTTTATTTTTCTTCACTG  250

seq1  AATTCCTGAATGTTTGGAAGGCACAAGCAGAAACCTTGGGGAAAGGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGAATGTTTGGAAGGCACAAGCAGAAACCTTGGGGAAAGGAGGC  300

seq1  TTCTGGGGTTGAGGAGAGGTCAGAATCCTGGGTAGCTTGATGACCTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGTTGAGGAGAGGTCAGAATCCTGGGTAGCTTGATGACCTGTGT  350

seq1  CTCAGGGGCCACACTGAGGCCGCACTGACGAAGAGACTTTCTCTGTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGGCCACACTGAGGCCGCACTGACGAAGAGACTTTCTCTGTTCAT  400

seq1  AGCTGTAAGCTCACTCTCTGATGATTGTGGTTTTACTTACACAGCATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAAGCTCACTCTCTGATGATTGTGGTTTTACTTACACAGCATCAA  450

seq1  TCGTGGCCTGGACAGTTGTGTTTTTAAAGATGCATTTATTGCATTTACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGCCTGGACAGTTGTGTTTTTAAAGATGCATTTATTGCATTTACAT  500

seq1  GAGTACACTGTCACTCTCTTCAGACACACCAGGAGAGGACACCAGATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACTGTCACTCTCTTCAGACACACCAGGAGAGGACACCAGATACC  550

seq1  ATTACAATAGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATAGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGA  600

seq1  CCTCTGGAAGAGCAGCCAGTTAGTGTTCTTAACCACCGAGCCATCTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGAAGAGCAGCCAGTTAGTGTTCTTAACCACCGAGCCATCTCTCC  650

seq1  AGCCCTGACCTGGACAG-TTTTAATTCCAATTCTGGACTGGCCCAGCTTA  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCCCTGACCTGGACAGTTTTTAATTCCAATTCTGGACTGGCCCAGCTTA  700

seq1  TC-TTTTGAGTG-TCACATGTACAGATTG-TTGTTATAGCCTTGTGTGCG  746
      || ||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  TCTTTTTGAGTGTTCACATGTACAGATTGTTTGTTATAGCCTTGTGTGCG  750

seq1  GCTTATGGTAGAGAGT-ATGCTGTTG-AGGGTG-AAGGGCCCTCTCTGTG  793
      |||||||||||||||| ||||||||| |||||| |||||| |||||||||
seq2  GCTTATGGTAGAGAGTAATGCTGTTGAAGGGTGAAAGGGCTCTCTCTGTG  800

seq1  GACAAAGACACCCAAAAGAGGCT  816
      ||||| ||||||||||||||| |
seq2  GACAATGACACCCAAAAGAGGTT  823