BAC Information

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BAC

Clone NameB6Ng01-058C10
Chromosome12 (Build37)
Map Location 7,413,021 - 7,551,898
singlet/doubletdoublet
Overlap geneLOC668380
Upstream geneLOC100042118
Downstream geneEG668388, Apob, 1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058C10.bB6Ng01-058C10.g
ACCDH879807DH879808
length1,1031,144
definitionDH879807|Mus musculus domesticus DNA, BAC clone: B6Ng01-058C10, 5' end.DH879808|Mus musculus domesticus DNA, BAC clone: B6Ng01-058C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,413,021 - 7,413,645)(7,550,735 - 7,551,898)
sequence
gaattctttgttcagctctgagccccattttttaacggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttgggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatcttcaaggcctttccctac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatatgaccttagtacaaggagatagaaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtatgtggattcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcactataccagtaccatgcagttttgatcacaattgc
tctgtggtacagttttaggtccagcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatctgccaattgccctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatggccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttctttagagacttgaagttcttatcata
cagatctttcacttccttagttagagtcacgccaaggtattttatattat
ttgggtcatgtcagggtcttgggcgtgggcatttctcctctgctactaat
ttctgcttttaagacttccttaaaaggggggcttgaggagaaggttcact
ggctaacaacctagcctaggtccttgcagaagacctggaattcaggtccc
aaa

gaattcatcttaggaaggaagcttatttctgtagcaatagagttggctcc
ccataacccataatctttgtggcaaaagagacctagacaagctaattagt
acctgataatgtttgaggcccctccatggtcaattctgcacatttccatc
tggctgaactgtagagcagttaataagttagtggatcgggacccagagag
aggttggtatgtggggccctattcactgagtgaagaaggtggagagacac
tgagtagtctttaaaccagtatgtgtgttctagaagcagtttgcctttaa
gtattaaggataatcagaaaatcaaatctattatacaaagaagactcagg
aagaaaaatgcaattgaagctaataattcagatttggaaactgtaccttg
tttattaagaaccttcgaggccaatgtttggtctttgttctttctatcca
acttccctcgctgggcatcccttaggtgctcttgtctttctgggtgtcag
gagattctccatgttgctaacttgccctctgcatcctcaactcagggtgt
cctggagctgagaccttctgtcctagaaggacctctcagagtgatcagtt
gtgagataaaataatgtaaccatgggaaagcatatcaggatttgcttagt
ataggaggtatatgtcaatttgtgtagtactgtataatttagaaaggtct
ggaaatcatactgccctatctttaataacataagagaaaacagaggttag
aagaaaaactcccatgtaggtggactttcgtgcttcttgttaggatttaa
gacagactgcggatataaaatcctgctacgtcaggtatgtatacagcgtg
ctgtgctaaagacagcatgttctgcctcagagcatcagctccagtgtgag
ctgggactttgaaatgcatgctaaacctagaggtgatcagctatgtttga
aacaagagatgtggaggatgacttctgtttcatagacttccctttatgat
aactcaattaattttatagccatgccatagattgcctataaaatgctgtc
aagggttcttaaaacctacgttacagacacatttaaagtggtggaaattc
taagtgaatccaagctaattgggatcggaaaatcctgcctgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_7413021_7413645
seq2: B6Ng01-058C10.b_523_1146

seq1  CTCCCTTGTCAAAGATCAAGTGACCATAGGTATGTGGATTCATCTCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTGTCAAAGATCAAGTGACCATAGGTATGTGGATTCATCTCTGGG  50

seq1  TCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCACTATACCAGTACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCACTATACCAGTACCA  100

seq1  TGCAGTTTTGATCACAATTGCTCTGTGGTACAGTTTTAGGTCCAGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTTGATCACAATTGCTCTGTGGTACAGTTTTAGGTCCAGCATGG  150

seq1  TGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTC  200

seq1  GGTTTTTTGTTATTCCAGATGAATCTGCCAATTGCCCTTTCTAATTCGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTGTTATTCCAGATGAATCTGCCAATTGCCCTTTCTAATTCGTT  250

seq1  GAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTGTAGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAATCTGTAGATTG  300

seq1  CTTTTGGCAAGATGGCCATTTTTACAATGTTGATCCTGCCAATCCATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGCAAGATGGCCATTTTTACAATGTTGATCCTGCCAATCCATGAG  350

seq1  CATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTCTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTCTTTAG  400

seq1  AGACTTGAAGTTCTTATCATACAGATCTTTCACTTCCTTAGTTAGAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGAAGTTCTTATCATACAGATCTTTCACTTCCTTAGTTAGAGTCA  450

seq1  CGCCAAGGTATTTTATATTATTTGTGTCAATGTCAGTGTCTTGTGCGT-G  499
      |||||||||||||||||||||||| ||| ||||||| |||||| |||| |
seq2  CGCCAAGGTATTTTATATTATTTGGGTC-ATGTCAGGGTCTTGGGCGTGG  499

seq1  GCATTTCTCCTCTGCTTACTAATTCCTGCTTTTAAGACTTCCTTAGAAAG  549
      ||||||||||||||| |||||||| |||||||||||||||||||| ||||
seq2  GCATTTCTCCTCTGC-TACTAATTTCTGCTTTTAAGACTTCCTTA-AAAG  547

seq1  TGGGGCTAGA-GAGAAGGCTCACTGGCTAACAGCCTAGCCTAGGTCTCTT  598
       |||||| || ||||||| ||||||||||||| ||||||||||||| |||
seq2  GGGGGCTTGAGGAGAAGGTTCACTGGCTAACAACCTAGCCTAGGTC-CTT  596

seq1  GCAGAAGACCT-GAATTCAGGTCCCAAA  625
      ||||||||||| ||||||||||||||||
seq2  GCAGAAGACCTGGAATTCAGGTCCCAAA  624


seq1: chr12_7550735_7551898
seq2: B6Ng01-058C10.g_67_1210 (reverse)

seq1  GAACAGTGCAGGATCTTTTTCAGATCCCAATATGACATCGCATTTCACTC  50
      |||||| ||||||   ||||| ||||||||| |  | | |   |||||| 
seq2  GAACAG-GCAGGA---TTTTCCGATCCCAAT-TAGCTTGG--ATTCACT-  42

seq1  TAGAATTTTTCACCACTCTAAAT-TGTCTGTTAAACTGTAGGTTTTATAG  99
      ||||| ||| ||||||| ||||| |||||||  ||| |||||||||| ||
seq2  TAGAA-TTTCCACCACTTTAAATGTGTCTGT--AAC-GTAGGTTTTA-AG  87

seq1  GACACCTTGAACAGCATTTTATAAGGCAATTCATAGGCACTGCTATTAAA  149
       || ||||| |||||||||||| |||||||  || ||||  |||| ||||
seq2  AAC-CCTTG-ACAGCATTTTAT-AGGCAATCTAT-GGCATGGCTA-TAAA  132

seq1  ATTAATTGAGTTATCATTAAAGGGGAAGTCTATGAAACAGAAGTCATCCT  199
      |||||||||||||||||  || ||||||||||||||||||||||||||||
seq2  ATTAATTGAGTTATCAT--AAAGGGAAGTCTATGAAACAGAAGTCATCCT  180

seq1  CCACATCTCTTGTTTCAAACATAGCTGATCACCTCTAGGTTTAGCATGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTCTTGTTTCAAACATAGCTGATCACCTCTAGGTTTAGCATGCA  230

seq1  TTTCAAAGTCCCAGCTCACACTGGAGCTGATGCTCTGAGGCAGAACATGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTCCCAGCTCACACTGGAGCTGATGCTCTGAGGCAGAACATGC  280

seq1  TGTCTTTAGCACAGCACGCTGTATACATACCTGACGTAGCAGGATTTTTA  349
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTCTTTAGCACAGCACGCTGTATACATACCTGACGTAGCAGGA-TTTTA  329

seq1  TATCCGCAGTCTGTCTTAAATCCTAACAAGAAGCACGAAAGTCCACCTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCGCAGTCTGTCTTAAATCCTAACAAGAAGCACGAAAGTCCACCTAC  379

seq1  ATGGGAGTTTTTCTTCTAACCTCTGTTTTCTCTTATGTTATTAAAGATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGTTTTTCTTCTAACCTCTGTTTTCTCTTATGTTATTAAAGATAG  429

seq1  GGCAGTATGATTTCCAGACCTTTCTAAATTATACAGTACTACACAAATTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTATGATTTCCAGACCTTTCTAAATTATACAGTACTACACAAATTG  479

seq1  ACATATACCTCCTATACTAAGCAAATCCTGATATGCTTTCCCATGGTTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACCTCCTATACTAAGCAAATCCTGATATGCTTTCCCATGGTTAC  529

seq1  ATTATTTTATCTCACAACTGATCACTCTGAGAGGTCCTTCTAGGACAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTATCTCACAACTGATCACTCTGAGAGGTCCTTCTAGGACAGAA  579

seq1  GGTCTCAGCTCCAGGACACCCTGAGTTGAGGATGCAGAGGGCAAGTTAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAGCTCCAGGACACCCTGAGTTGAGGATGCAGAGGGCAAGTTAGC  629

seq1  AACATGGAGAATCTCCTGACACCCAGAAAGACAAGAGCACCTAAGGGATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGAGAATCTCCTGACACCCAGAAAGACAAGAGCACCTAAGGGATG  679

seq1  CCCAGCGAGGGAAGTTGGATAGAAAGAACAAAGACCAAACATTGGCCTCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCGAGGGAAGTTGGATAGAAAGAACAAAGACCAAACATTGGCCTCG  729

seq1  AAGGTTCTTAATAAACAAGGTACAGTTTCCAAATCTGAATTATTAGCTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTTAATAAACAAGGTACAGTTTCCAAATCTGAATTATTAGCTTC  779

seq1  AATTGCATTTTTCTTCCTGAGTCTTCTTTGTATAATAGATTTGATTTTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCATTTTTCTTCCTGAGTCTTCTTTGTATAATAGATTTGATTTTCT  829

seq1  GATTATCCTTAATACTTAAAGGCAAACTGCTTCTAGAACACACATACTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATCCTTAATACTTAAAGGCAAACTGCTTCTAGAACACACATACTGG  879

seq1  TTTAAAGACTACTCAGTGTCTCTCCACCTTCTTCACTCAGTGAATAGGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGACTACTCAGTGTCTCTCCACCTTCTTCACTCAGTGAATAGGGC  929

seq1  CCCACATACCAACCTCTCTCTGGGTCCCGATCCACTAACTTATTAACTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATACCAACCTCTCTCTGGGTCCCGATCCACTAACTTATTAACTGC  979

seq1  TCTACAGTTCAGCCAGATGGAAATGTGCAGAATTGACCATGGAGGGGCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGTTCAGCCAGATGGAAATGTGCAGAATTGACCATGGAGGGGCCT  1029

seq1  CAAACATTATCAGGTACTAATTAGCTTGTCTAGGTCTCTTTTGCCACAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTATCAGGTACTAATTAGCTTGTCTAGGTCTCTTTTGCCACAAA  1079

seq1  GATTATGGGTTATGGGGAGCCAACTCTATTGCTACAGAAATAAGCTTCCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGGGTTATGGGGAGCCAACTCTATTGCTACAGAAATAAGCTTCCT  1129

seq1  TCCTAAGATGAATTC  1164
      |||||||||||||||
seq2  TCCTAAGATGAATTC  1144


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