BAC Information

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BAC

Clone NameB6Ng01-058H08
Chromosome12 (Build37)
Map Location 26,188,020 - 26,189,174
singlet/doubletsinglet
Overlap genenone
Upstream geneTaf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2
Downstream geneLOC100042973, LOC100042974, LOC668726, Rnf144, Rsad2, Tyki, LOC668731
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058H08.bB6Ng01-058H08.g
ACCDH880030DH880031
length1,1421,282
definitionDH880030|Mus musculus domesticus DNA, BAC clone: B6Ng01-058H08, 5' end.DH880031|Mus musculus domesticus DNA, BAC clone: B6Ng01-058H08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatcattcccctgttgcctggagacccccaccatccatggca
tctctgtctctggcatgtcttcatatccagggctggactcatcaccattt
agttcatttgacctgggacatttcctacttttcctggttcccccacatct
catcataactacctcagccacaatgacaaaggcaggagccaatagagctc
tttccatgtccctctcagctcttttcagaggtcagactgcagcagatcag
tgactgaggcagcctggagtctgcatttccaacaggtttctaggacctgg
ggtctgcgtggagatcccacaataaatagcaggttcttagcacttgtgaa
acttgtttaatcctcatagtaagtcactcataactctattgtccagtgag
aaaaactgaggcacagtaaggccaagtgacttgttttagggctatacacc
aagtaagtggtggagttgatatttgaactcctgacatctgctgcatgatc
caactccttgttcaccactctgtgctacttgtacatccgtcttaatgaat
cataactcactcttctccctctttcaagccataatgaagtttattcagcc
aacctcccagtcccttaatgtccttacctgtgaaatgggctgaggcaata
tctatctcagagggtcactgtgagctcaaacaaaccatgaaatctcaaca
gttttgatctttcctctccttctttttcttctccttcctcctcctccttg
cttctgtctctttcctttttctcctcttcttcttttctttcttctccttc
tattatcccttctagcatgtgactaataatgtagactttagacccatcac
tgaaatctgagctgtctctagtgttccttagctgtgtgtcaacttggtgt
atattttaattcctctgtaaattggctccttcatctattaagtgtggatg
ttagatctcgttcctcaaggagttattttgtggcagtgaactagataata
catgtaaagttcataagatagttattgagagagattaagatgtttattgt
tgttatgctattcattagctatttcttttggccaacccacattcagtatt
tggaaatatgctgcaatatactcctgttcattcagctttatg
gaattctggtaggaattggattagaggggattcatgttccattctggcaa
aagtttaacgtatgtcttgaaatttgagtatggcttaagaatgaaatata
atggactgattaagtgagtagggggatattcaagacagcatagtgttcag
actgcagcatgattgttgcaagctctgtttaaccagatatacaaagagaa
aaggaaacaaaaagctgagctcaaggctatgtagaagaaggcagtctggg
ctgaaaagagcagtggttaaaggcacagacaagggcatcaaagcttaagt
ggatcaacacttctaaaaagaaattgtaagatttgcagcagagtaagcag
gaagtctggggtatttcaggagctgagggagaatatctgtccaagattca
tagggtaaaactacaaatgcatttcaaatactttcctttaaaaagagcca
cagcgttgccttgcaaaaccaaagaatcctagggaaatattttcccaggt
ttaagcagacagtcattgcaactttagcccaaaggcttaacagttgttta
agctggtagcagaacattgcttaatcttcatgatgctgggtaataagcat
gcaaaatacagattctaggcttgcacctagattatgaatggaagtctatg
agacccaacaatgtgtcacaactgggtgggaggcccggaaaggagccctt
gcagggtataagagggtggagcctaagttgcagtagagatcttaaatctt
gaccattgaatctgaaatgtctccacacactcatagtttaaatgattgtt
ctgtagcatgtggtactatttttgaagctgtggaaccttttaggagtgtg
gcctacatagatgcagctcattagaagcttcccctagaaggttctggctt
gcctgtggttcctgctactctttatctctgcttactggtttgccgtaatt
tgaggaacttctgccatatatcactgctgctatgaactctatcatgtcta
ccctggtatgatggactgaaaccagagccaaaataatctttctccctaag
ctgtggtaatctcaatcaaacagtgatgaaatacaaagccagactccttg
aaaccactcaaagacactttgtttctgggcaaaaaagatatatatcactt
ctggttccgatgtaatttaaagcttcccttcctaatacggacatggctaa
agaaatggaaatacctgtatactaatgcactgtgttgaccatgggtacct
cctgtcactcacaggagatgtgagtacgtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26188020_26189174
seq2: B6Ng01-058H08.b_43_1184

seq1  GAATTCTTCATCATTCCCCTGTTGCCTGGAGACCCCCACCATCCATGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCATTCCCCTGTTGCCTGGAGACCCCCACCATCCATGGCA  50

seq1  TCTCTGTCTCTGGCATGTCTTCATATCCAGGGCTGGACTCATCACCATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCTGGCATGTCTTCATATCCAGGGCTGGACTCATCACCATTT  100

seq1  AGTTCATTTGACCTGGGACATTTCCTACTTTTCCTGGTTCCCCCACATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATTTGACCTGGGACATTTCCTACTTTTCCTGGTTCCCCCACATCT  150

seq1  CATCATAACTACCTCAGCCACAATGACAAAGGCAGGAGCCAATAGAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATAACTACCTCAGCCACAATGACAAAGGCAGGAGCCAATAGAGCTC  200

seq1  TTTCCATGTCCCTCTCAGCTCTTTTCAGAGGTCAGACTGCAGCAGATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTCCCTCTCAGCTCTTTTCAGAGGTCAGACTGCAGCAGATCAG  250

seq1  TGACTGAGGCAGCCTGGAGTCTGCATTTCCAACAGGTTTCTAGGACCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGGCAGCCTGGAGTCTGCATTTCCAACAGGTTTCTAGGACCTGG  300

seq1  GGTCTGCGTGGAGATCCCACAATAAATAGCAGGTTCTTAGCACTTGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCGTGGAGATCCCACAATAAATAGCAGGTTCTTAGCACTTGTGAA  350

seq1  ACTTGTTTAATCCTCATAGTAAGTCACTCATAACTCTATTGTCCAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTAATCCTCATAGTAAGTCACTCATAACTCTATTGTCCAGTGAG  400

seq1  AAAAACTGAGGCACAGTAAGGCCAAGTGACTTGTTTTAGGGCTATACACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGAGGCACAGTAAGGCCAAGTGACTTGTTTTAGGGCTATACACC  450

seq1  AAGTAAGTGGTGGAGTTGATATTTGAACTCCTGACATCTGCTGCATGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGTGGTGGAGTTGATATTTGAACTCCTGACATCTGCTGCATGATC  500

seq1  CAACTCCTTGTTCACCACTCTGTGCTACTTGTACATCCGTCTTAATGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCCTTGTTCACCACTCTGTGCTACTTGTACATCCGTCTTAATGAAT  550

seq1  CATAACTCACTCTTCTCCCTCTTTCAAGCCATAATGAAGTTTATTCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTCACTCTTCTCCCTCTTTCAAGCCATAATGAAGTTTATTCAGCC  600

seq1  AACCTCCCAGTCCCTTAATGTCCTTACCTGTGAAATGGGCTGAGGCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCCAGTCCCTTAATGTCCTTACCTGTGAAATGGGCTGAGGCAATA  650

seq1  TCTATCTCAGAGGGTCACTGTGAGCTCAAACAAACCATGAAATCTCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCAGAGGGTCACTGTGAGCTCAAACAAACCATGAAATCTCAACA  700

seq1  GTTTTGATCTTTCCTCTCCTTCTTTTTCTTCTCCTTCCTCCTCCTCCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATCTTTCCTCTCCTTCTTTTTCTTCTCCTTCCTCCTCCTCCTTG  750

seq1  CTTCTGTCTCTTTCCTTTTTCTCCTCTTCTTCTTTTCTTTCTTCTCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCTCTTTCCTTTTTCTCCTCTTCTTCTTTTCTTTCTTCTCCTTC  800

seq1  TATTATCCCTTCTAGCATGTGACTAATAATGTAGACTTTAGACCCATCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCCCTTCTAGCATGTGACTAATAATGTAGACTTTAGACCCATCAC  850

seq1  TGAAATCTGAGCTGTCTCTAGTGTTCCTTAGCTGTGTGTCAACTTGGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTGAGCTGTCTCTAGTGTTCCTTAGCTGTGTGTCAACTTGGTGT  900

seq1  ATATTTTAATTCCTCTGTAAATTGGCTCCTTCATCTATTAAGTGTGGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAATTCCTCTGTAAATTGGCTCCTTCATCTATTAAGTGTGGATG  950

seq1  TTAAGATCTCGTTCCTCAAGGAGTTATTTTGTGGCAGGTGAACTAGATAA  1000
      || ||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TT-AGATCTCGTTCCTCAAGGAGTTATTTTGTGGCA-GTGAACTAGATAA  998

seq1  TACATGTAAAAGTTCATAAGATAGATTATTGAGAAGAGATTAAGATGTTT  1050
      ||||||| |||||||||||||||| |||||||| ||||||||||||||||
seq2  TACATGT-AAAGTTCATAAGATAG-TTATTGAG-AGAGATTAAGATGTTT  1045

seq1  ATTGTTGTTATTGCTATTCAATTAGCTCATTCCTTTTGGCCACACCCACA  1100
      |||||||||| |||||||| ||||||| ||| |||||||||| |||||||
seq2  ATTGTTGTTA-TGCTATTC-ATTAGCT-ATTTCTTTTGGCCA-ACCCACA  1091

seq1  TCCAGTTATTTGGATAATATGCTGCATATATACT-CTGTTCTATTCAGTC  1149
      | ||| |||||||| ||||||||||| ||||||| |||||| |||||| |
seq2  TTCAG-TATTTGGA-AATATGCTGCA-ATATACTCCTGTTC-ATTCAG-C  1136

seq1  TTTATG  1155
      ||||||
seq2  TTTATG  1142