BAC Information

Click to search

BAC

Clone NameB6Ng01-059F06
Chromosome12 (Build37)
Map Location 15,419,198 - 15,497,793
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059F06.bB6Ng01-059F06.g
ACCDH880644DH880645
length2121,051
definitionDH880644|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F06, 5' end.DH880645|Mus musculus domesticus DNA, BAC clone: B6Ng01-059F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,497,582 - 15,497,793)(15,419,198 - 15,420,252)
sequence
accaagaatagctcctaatgacaattaaggctttaatactgaaagcatgt
tgtaacctaaatctgtttaattacttcatgttgaagtacaaatacgacta
ttttttcctattttttggtacacacatgtagcttaaaacaatagttgcct
caaatttgaggaaaagaaactctgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtg
gaattccctctacagtgtcctccagttaactaatcaccacgttaatttga
ttgtttctcaagtttgccctcatgctgcaattatttggttactaaaaatc
ctttgattatattttcatgtacaaatgtctgagtaaatttttcttaaaag
ttatacatatggatacatcttccatgattgctacgagaaaaaagaaggga
aagtgtgggttagagacaaccagcatgaatctccattctcatgacactga
aataatgcatcaaacaaaaatctgaagggagtgatgggaaatgaggtaca
tgcacacaggaattcaaaaggaaataggggaagacagaaaccatggcttg
tagattaggaaatgaaacaaaaatataacgccaggcactaagcaacatga
tagggaaaaggacttacttgcccagtaggactactaaaacagagaagaaa
atacctcagccagctccaagtcacacaggctggtactctagaaaacagtt
tatgataaaggatttgtcacccttgtagaatgtgggtgtgatggaggtca
gacttctgtcaccagaactcactagtatgggtacttggtgaggaaccatc
ttcaaaaactatcttaccatcaaccattttatgttaaggtctgagaagtc
tctgtatttttctatttccgaagccctaagacctccacccttcagtgtct
gaaagaataaccagcagatcagccatgttggagagtcatctggttctaac
ttgaacccatgaacacagatctaggtggtgataagtaaggacctcactga
agtggaagagaaagagtgggttttcatataagaacagaacctcttgaaag
aagaccagctgtgtctggatatgaacaggagactgggacaaagaccagaa
tgagaagacgcaggtatgctcagcacctgcctgcagctcacactgtatag
attgctctcaaagcattgggatatctttgtggaacagcatttggtcagcc
tttccatgctgtgcctgctggcaggttgcttcatgagtgatgaagataca
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15497582_15497793
seq2: B6Ng01-059F06.b_52_263 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACAGAGTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACAGAGTTTCTTT  50

seq1  TCCTCAAATTTGAGGCAACTATTGTTTTAAGCTACATGTGTGTACCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAATTTGAGGCAACTATTGTTTTAAGCTACATGTGTGTACCAAAA  100

seq1  AATAGGAAAAAATAGTCGTATTTGTACTTCAACATGAAGTAATTAAACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAAAAATAGTCGTATTTGTACTTCAACATGAAGTAATTAAACAG  150

seq1  ATTTAGGTTACAACATGCTTTCAGTATTAAAGCCTTAATTGTCATTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGTTACAACATGCTTTCAGTATTAAAGCCTTAATTGTCATTAGGA  200

seq1  GCTATTCTTGGT  212
      ||||||||||||
seq2  GCTATTCTTGGT  212

seq1: chr12_15419198_15420252
seq2: B6Ng01-059F06.g_68_1118

seq1  GAATTCCCTCTACAGTGTCCTCCAGTTAACTAATCACCACGTTAATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTACAGTGTCCTCCAGTTAACTAATCACCACGTTAATTTGA  50

seq1  TTGTTTCTCAAGTTTGCCCTCATGCTGCAATTATTTGGTTACTAAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTCAAGTTTGCCCTCATGCTGCAATTATTTGGTTACTAAAAATC  100

seq1  CTTTGATTATATTTTCATGTACAAATGTCTGAGTAAATTTTTCTTAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATTATATTTTCATGTACAAATGTCTGAGTAAATTTTTCTTAAAAG  150

seq1  TTATACATATGGATACATCTTCCATGATTGCTACGAGAAAAAAGAAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATATGGATACATCTTCCATGATTGCTACGAGAAAAAAGAAGGGA  200

seq1  AAGTGTGGGTTAGAGACAACCAGCATGAATCTCCATTCTCATGACACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGGTTAGAGACAACCAGCATGAATCTCCATTCTCATGACACTGA  250

seq1  AATAATGCATCAAACAAAAATCTGAAGGGAGTGATGGGAAATGAGGTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGCATCAAACAAAAATCTGAAGGGAGTGATGGGAAATGAGGTACA  300

seq1  TGCACACAGGAATTCAAAAGGAAATAGGGGAAGACAGAAACCATGGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACAGGAATTCAAAAGGAAATAGGGGAAGACAGAAACCATGGCTTG  350

seq1  TAGATTAGGAAATGAAACAAAAATATAACGCCAGGCACTAAGCAACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAGGAAATGAAACAAAAATATAACGCCAGGCACTAAGCAACATGA  400

seq1  TAGGGAAAAGGACTTACTTGCCCAGTAGGACTACTAAAACAGAGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAAAGGACTTACTTGCCCAGTAGGACTACTAAAACAGAGAAGAAA  450

seq1  ATACCTCAGCCAGCTCCAAGTCACACAGGCTGGTACTCTAGAAAACAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTCAGCCAGCTCCAAGTCACACAGGCTGGTACTCTAGAAAACAGTT  500

seq1  TATGATAAAGGATTTGTCACCCTTGTAGAATGTGGGTGTGATGGAGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAAGGATTTGTCACCCTTGTAGAATGTGGGTGTGATGGAGGTCA  550

seq1  GACTTCTGTCACCAGAACTCACTAGTATGGGTACTTGGTGAGGAACCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTGTCACCAGAACTCACTAGTATGGGTACTTGGTGAGGAACCATC  600

seq1  TTCAAAAACTATCTTACCATCAACCATTTTATGTTAAGGTCTGAGAAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAACTATCTTACCATCAACCATTTTATGTTAAGGTCTGAGAAGTC  650

seq1  TCTGTATTTTTCTATTTCCGAAGCCCTAAGACCTCCACCCTTCAGTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTTTCTATTTCCGAAGCCCTAAGACCTCCACCCTTCAGTGTCT  700

seq1  GAAAGAATAACCAGCAGATCAGCCATGTTGGAGAGTCATCTGGTTCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATAACCAGCAGATCAGCCATGTTGGAGAGTCATCTGGTTCTAAC  750

seq1  TTGAACCCATGAACACAGATCTAGGTGGTGATAAGTAAGGACCTCACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCCATGAACACAGATCTAGGTGGTGATAAGTAAGGACCTCACTGA  800

seq1  AGTGGAAGAGAAAGAGTGGG-TTTCATATAAGAACAGAACCTCTTGAAAG  849
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGTGGAAGAGAAAGAGTGGGTTTTCATATAAGAACAGAACCTCTTGAAAG  850

seq1  AAGACCAGCTGTGTCTGGATATGAACAGGAGACTGGGACAAAGACCAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGCTGTGTCTGGATATGAACAGGAGACTGGGACAAAGACCAGAA  900

seq1  TGAGAAGACGCAGGTATGCTCAGCACCTGCCTGCAGCTCACACTGTATAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGACGCAGGTATGCTCAGCACCTGCCTGCAGCTCACACTGTATAG  950

seq1  ATTGCTCTCAGAGCATTGGGGATATCTTTGTGGAACAGCATTTGGTCAGC  999
      |||||||||| |||||| ||||||||||||||||||||||||||||||||
seq2  ATTGCTCTCAAAGCATT-GGGATATCTTTGTGGAACAGCATTTGGTCAGC  999

seq1  CTTTTCCATGCTTGTGCCTGCTGGCAGAGTGCCTCCATGAGTGTATGAAG  1049
      | ||||||||| ||||||||||||||| ||  || |||||||| ||||||
seq2  C-TTTCCATGC-TGTGCCTGCTGGCAG-GTTGCTTCATGAGTG-ATGAAG  1045

seq1  ATACAC  1055
      ||||||
seq2  ATACAC  1051