BAC Information

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BAC

Clone NameB6Ng01-060C07
Chromosome12 (Build37)
Map Location 69,254,170 - 69,255,340
singlet/doubletsinglet
Overlap genenone
Upstream geneMdga2, LOC100040745, LOC100040681
Downstream geneLOC100040696, LOC665967, LOC665973
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060C07.bB6Ng01-060C07.g
ACCDH881208DH881209
length1,143762
definitionDH881208|Mus musculus domesticus DNA, BAC clone: B6Ng01-060C07, 5' end.DH881209|Mus musculus domesticus DNA, BAC clone: B6Ng01-060C07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcattctgtcatttgcggcaaatactttaaatctctgctaata
cctatattaaaataatgtgttcacaatgggtaagtattcctacaagatca
tacagagctattgcatctaatgaaaattattcacattcaataaattgtca
aactattgagtaattgaaaattaaaaaggagtcatcatgttaacatagtg
acacactgttccacatctgtttgtatggaagaatttatcttttgtaccaa
taataatagttcattgcttttaagggactaaagttataaaatggtctaaa
tcattcatgtctaacttctcaattaattatactgatattttgctactgct
caaaaaatatgacatttgtggtcatattagcatatagaattttatgtagc
ctacaaacttttagagaaaatattttgtttaatgatgatgttttcgggca
tggtaagtagatttcaaaattgctttttcacgtttcttgatattaatgaa
agctatctgatgagtgttcccccttctcacatcatctttgttatgcagaa
caaaatggaacctgccacataaaaaaatgcaggactcttttagagcagta
taaaaagacaactttcctttcatttttataattcttagagttgtaaatgt
acactcaatatagatacattttctacacaattgaagtagttgcaacaaat
gatggcaatgagcctggtaaaaagtaaaatacatgatcgtgaatgctaga
tgacaaagctctagctttttttttttttttaaagatttatttatttatta
tatgtaagtacactgtagctgtcctcagatactccagaagagggcatcag
attttattatggatggttgtgagccatcatgtggttgctgggattgaact
cgggaccttcaagagagcagtcggcgctcttaaccactgagccatctcac
agctcagctctagctttaaaacataaaacaaagtattttcttatttattt
aacgggctagcttctgtgtcatggaaacacaagcactaccttaggtagct
aaaagtacatggtctacggatttgttttcgaatataaaggcaaagttctt
aatttattccaataggcaatctcaacaagggaagtaaaactaa

gaattcttttttatatttcttctttgagacagtggtcattgaatagagag
ttgttcagtttccaaaagtctgtagcctttcttttgtttctgttgttgaa
atctaactttaatccatggtaatctgagaatatggcaggggctatttcaa
ttttcttgtatttgttgaggcttgctttgtgacaggccatatcaacaatt
ttggtgaagattctgtgaggggctgagaagaaagtctattcttttgtgtt
tgattgaagtgatctgcagtcatttgttagatccgttgattcataatgtc
ttttacattcattatttctctgtttagtttctgttttgatgacatgccca
ttggtgtgagtgggttgttgatgtcttctaatattgctatgtggggttca
gtgtgtgacttagctttagtaatgtttcttttacaaatgtgggtgacctt
gcatttggggaatagatgtttataattgggatgtcatcttggtggatgtt
gttttctttgatgaggatgaaatgtctttcccaatctcttttgtttactt
ttgattgaaagtttaatctttttccagccctttactctgagttagtatct
atctttattgcagaggtatgtttcttgtatatagcagaatgatggatcct
gtttatgcatccaccttgtcttttaattggggaattgagtccattgatgt
tgatgaatattaaggaccaatgattgttaatccctgctattttgatgttg
gtagtactgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_69254170_69255340
seq2: B6Ng01-060C07.b_45_1187

seq1  GAATTCCTCATTCTGTCATTTGCGGCAAATACTTTAAATCTCTGCTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATTCTGTCATTTGCGGCAAATACTTTAAATCTCTGCTAATA  50

seq1  CCTATATTAAAATAATGTGTTCACAATGGGTAAGTATTCCTACAAGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATTAAAATAATGTGTTCACAATGGGTAAGTATTCCTACAAGATCA  100

seq1  TACAGAGCTATTGCATCTAATGAAAATTATTCACATTCAATAAATTGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCTATTGCATCTAATGAAAATTATTCACATTCAATAAATTGTCA  150

seq1  AACTATTGAGTAATTGAAAATTAAAAAGGAGTCATCATGTTAACATAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTGAGTAATTGAAAATTAAAAAGGAGTCATCATGTTAACATAGTG  200

seq1  ACACACTGTTCCACATCTGTTTGTATGGAAGAATTTATCTTTTGTACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTGTTCCACATCTGTTTGTATGGAAGAATTTATCTTTTGTACCAA  250

seq1  TAATAATAGTTCATTGCTTTTAAGGGACTAAAGTTATAAAATGGTCTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAGTTCATTGCTTTTAAGGGACTAAAGTTATAAAATGGTCTAAA  300

seq1  TCATTCATGTCTAACTTCTCAATTAATTATACTGATATTTTGCTACTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATGTCTAACTTCTCAATTAATTATACTGATATTTTGCTACTGCT  350

seq1  CAAAAAATATGACATTTGTGGTCATATTAGCATATAGAATTTTATGTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAATATGACATTTGTGGTCATATTAGCATATAGAATTTTATGTAGC  400

seq1  CTACAAACTTTTAGAGAAAATATTTTGTTTAATGATGATGTTTTCGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAACTTTTAGAGAAAATATTTTGTTTAATGATGATGTTTTCGGGCA  450

seq1  TGGTAAGTAGATTTCAAAATTGCTTTTTCACGTTTCTTGATATTAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGTAGATTTCAAAATTGCTTTTTCACGTTTCTTGATATTAATGAA  500

seq1  AGCTATCTGATGAGTGTTCCCCCTTCTCACATCATCTTTGTTATGCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCTGATGAGTGTTCCCCCTTCTCACATCATCTTTGTTATGCAGAA  550

seq1  CAAAATGGAACCTGCCACATAAAAAAATGCAGGACTCTTTTAGAGCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGAACCTGCCACATAAAAAAATGCAGGACTCTTTTAGAGCAGTA  600

seq1  TAAAAAGACAACTTTCCTTTCATTTTTATAATTCTTAGAGTTGTAAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGACAACTTTCCTTTCATTTTTATAATTCTTAGAGTTGTAAATGT  650

seq1  ACACTCAATATAGATACATTTTCTACACAATTGAAGTAGTTGCAACAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAATATAGATACATTTTCTACACAATTGAAGTAGTTGCAACAAAT  700

seq1  GATGGCAATGAGCCTGGTAAAAAGTAAAATACATGATCGTGAATGCTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAATGAGCCTGGTAAAAAGTAAAATACATGATCGTGAATGCTAGA  750

seq1  TGACAAAGCTCTAGCTTTTTTTTTTTTTTTAAAGATTTATTTATTTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGCTCTAGCTTTTTTTTTTTTTTTAAAGATTTATTTATTTATTA  800

seq1  TATGTAAGTACACTGTAGCTGTCCTCAGATACTCCAGAAGAGGGCATCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGTACACTGTAGCTGTCCTCAGATACTCCAGAAGAGGGCATCAG  850

seq1  ATTTCATTATGGATGGTTGTGAGCCATCATGTGGTTGCTGGGATTTGAAC  900
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTTTATTATGGATGGTTGTGAGCCATCATGTGGTTGCTGGGA-TTGAAC  899

seq1  TCGGGACCTTCAGGAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCA  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCGGGACCTTCAAGAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCA  949

seq1  CCAGCCCAGCTCTAGCTTTTAAAACATAAAACAAAGTATTTTCTTATTTA  1000
       |||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  -CAGCTCAGCTCTAGC-TTTAAAACATAAAACAAAGTATTTTCTTATTTA  997

seq1  TTTTAACGGGGCTAGCTTCTGTGGCCATGGAAAACACAAGCCACCTACCT  1050
       |||||| |||||||||||||| | ||||| ||||||||||   ||||| 
seq2  -TTTAAC-GGGCTAGCTTCTGT-GTCATGG-AAACACAAGC--ACTACC-  1040

seq1  TTAGGTAAGCTAAAAAGTAACAATGGTTCCTACGGATTTGTTTTTCTGAT  1100
      |||||| |||| |||||||   |||||  |||||||||||||||   || 
seq2  TTAGGT-AGCT-AAAAGTA--CATGGT--CTACGGATTTGTTTT--CGAA  1082

seq1  TATAAAAGGCAAAGTTCACTAATTTTTATTTTCCAATAAAGCAATACTCA  1150
      ||| |||||||||||||  |||||    | ||||||| | ||||| ||| 
seq2  TAT-AAAGGCAAAGTTC-TTAATT----TATTCCAAT-AGGCAAT-CTC-  1123

seq1  AACAAGGTAAGTAAAAACTAA  1171
      ||||||| |||| ||||||||
seq2  AACAAGGGAAGT-AAAACTAA  1143


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