BAC Information

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BAC

Clone NameB6Ng01-060I12
Chromosome12 (Build37)
Map Location 64,019,720 - 64,020,932
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040403, LOC665713, LOC622746, LOC100040438, 1700047L15Rik, Tspyl-ps, EG665741
Downstream geneEG382606
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060I12.bB6Ng01-060I12.g
ACCDH881481DH881482
length1,0551,191
definitionDH881481|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I12, 5' end.DH881482|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgataagcacctgaaaaatgt
tcaacatccttaatcataacggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagataaaaaaattcagatgacagc
agatgctatgaggatgtggagaaagaagaacactcctccattgttggtgg
gattgcaagctggtataaccactctgaaaatcagtttgcccattcagaaa
attagacatagtattactggaggatccagtaatacctcttctgggcatat
acctagaagctgttccaactggtaataaggacacatgctccactatgttc
atagcagccttatttataatagtcaggaactggaaagaacccagatgtcc
ctcaacagaggaatggatatagaaaatatggtacagtcacacaatggagg
tgagaattctttgtttagctctgagccccattttttactggggttatttg
attttctggagtgaaactgaagaagaatgaagaccaaagtgtggacactt
tgccccttcttagaattggaaacaatcacccatggaaggagttacagaga
caaactttggagctgagacaaaaggatggaccatctagagactgccatat
ccagagatccatcccataattaacctccaaacgatgacaccattgcatac
actagcaagattttgctgaaaggatcctgatatagctgtctcttgtgaga
ctaggccggggcctagcaaacacataagtagatgctcacagtcagctatt
ggatggatcacagggcccccaatggagaaactagagaaagtatccaagga
gctaaagagatctgcaaccctatcggtggaacaacattatgaactaacca
gtatcctggagctcttgactctatctgcatatgtatcaaaagatggccta
gttggccatcactggaaagagaggcccattggacatgcaaactttatatg
ctcattacaggggattccagggccaaagaatgggatgggtgtggttaggg
agtgg

gaattcaagttaggcagcttacaaccatatggaactccaacacaggggac
gtgatacctcaattaatctgagctaattaaaatattgtacacatacctaa
gcacaggcacacatataacatttaaaaataataaatcttctaaatgagaa
atttaaagcatgtgataacacaaatgaaatgatccagaaaatgagaagtt
cagtttcttttaccttttaaaggtgtctaaacgttttcttcacttagcat
cttaagaaaattcatacattcatgaaagataagatcatagccttcacatt
gcatctgcttctccataaaacccagctagagcacagagtattttcctata
gtaaacaaatacaaaactaaaacaaagagatgaaagaaccaccctccaca
tatcatatcactggtccagctgtgttcatatgatagttaaatcttgtctc
acacaggtctgtgagactgtccatctcagaacttcatgaacaactatggc
aacccaggatcttagcctgctaaagctgggttcggccctcatatttcaca
gccaagggtcttttcctacttcataacttgaatgattgaggtcttcattc
actgaggtgtaccctaccaccattattcttttgtcaggtcattttccttt
gtcaagagtgtcttatcatatatttctacttcctacacgttctattgatc
agtattgactagtagtgaagaaatagggcagtagacaccatggagaaaac
tgggaagtagtattacagagctatcagtcattgtgtgtacattcacagga
ccagattgtccctttcacctcaagttttccaactatatggcagcacattt
aacatttatttacatcatagctttgtctatttaatgcatggtttttcaag
agttgattaatttataattgattctatttccccagtttcaattatatatg
actgcatggacttacaacaggacttgaggaaaataactcatttgaatttt
gattcaccttctctattaagaagttatggtcatggcatcttctggcatgt
attttagcgtgatttctgacataaaattgtaggtatagttcctcagtgca
acttatcaatgacaaagcaagtcaaaaggtatactatcaccgttcatggt
tccttacttcagaattaaataaacgccattctcccttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64019720_64020932
seq2: B6Ng01-060I12.g_68_1258 (reverse)

seq1  AGAGAAGGGAGAAATGACGTATTTATATTATAATCTTGAAAGTAAAAGAA  50
      ||||||||||| |||| ||  ||||| | ||  |||   ||||  ||| |
seq2  AGAGAAGGGAG-AATGGCG--TTTATTTAAT--TCT--GAAGT--AAGGA  41

seq1  AACATGAAAAGTGATAATTTTATACATTTTTGACTTTGCTTTTGTCATTG  100
      | ||||||  ||||||    |||||  ||||||| |||| ||||||||||
seq2  ACCATGAACGGTGATA---GTATAC-CTTTTGAC-TTGC-TTTGTCATTG  85

seq1  ATAAGTTGTGCACTGAGAAACTATAACTACAATTTTTATGTCAGAAATTA  150
      ||||||  ||||||||| ||||||| |||||| ||||||||||||||| |
seq2  ATAAGT--TGCACTGAGGAACTATACCTACAA-TTTTATGTCAGAAATCA  132

seq1  CGCTAAAAATACATGCCAGAAGATTGCATAGACAATAACTTTCTTAATAG  200
      |||| |||||||||||||||||||  ||| ||| ||||| ||||||||||
seq2  CGCT-AAAATACATGCCAGAAGATGCCAT-GACCATAAC-TTCTTAATAG  179

seq1  AGGAGGTGAATCAAAAATTCAAATGAGTTATTTTCCTCAAGT-CTGTTGT  249
      || ||||||||| ||||||||||||||||||||||||||||| |||||||
seq2  AGAAGGTGAATC-AAAATTCAAATGAGTTATTTTCCTCAAGTCCTGTTGT  228

seq1  AAAGTCATGCAGTCATTATATTAATTGAAACTGGGGAAATAGAATCAATT  299
      ||   |||||||||| |||| |||||||||||||||||||||||||||||
seq2  AAGTCCATGCAGTCA-TATA-TAATTGAAACTGGGGAAATAGAATCAATT  276

seq1  ATAAA-TAATCAACTCTTGAAAAACCATGCATTAAATAGACAAAGCTATG  348
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTAATCAACTCTTGAAAAACCATGCATTAAATAGACAAAGCTATG  326

seq1  ATGTAAATAAATGTTAAATGTGCTGCCATATAGTTGGAAAACTTGAGGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATAAATGTTAAATGTGCTGCCATATAGTTGGAAAACTTGAGGTG  376

seq1  AAAGGGACAATCTGGTCCTGTGAATGTACACACAATGACTGATAGCTCTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGACAATCTGGTCCTGTGAATGTACACACAATGACTGATAGCTCTG  426

seq1  TAATACTACTTCCCAGTTTTCTCCATGGTGTCTACTGCCCTATTTCTTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTACTTCCCAGTTTTCTCCATGGTGTCTACTGCCCTATTTCTTCA  476

seq1  CTACTAGTCAATACTGATCAATAGAACGTGTAGGAAGTAGAAATATATGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGTCAATACTGATCAATAGAACGTGTAGGAAGTAGAAATATATGA  526

seq1  TAAGACACTCTTGACAAAGGAAAATGACCTGACAAAAGAATAATGGTGGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACACTCTTGACAAAGGAAAATGACCTGACAAAAGAATAATGGTGGT  576

seq1  AGGGTACACCTCAGTGAATGAAGACCTCAATCATTCAAGTTATGAAGTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACACCTCAGTGAATGAAGACCTCAATCATTCAAGTTATGAAGTAG  626

seq1  GAAAAGACCCTTGGCTGTGAAATATGAGGGCCGAACCCAGCTTTAGCAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACCCTTGGCTGTGAAATATGAGGGCCGAACCCAGCTTTAGCAGG  676

seq1  CTAAGATCCTGGGTTGCCATAGTTGTTCATGAAGTTCTGAGATGGACAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATCCTGGGTTGCCATAGTTGTTCATGAAGTTCTGAGATGGACAGT  726

seq1  CTCACAGACCTGTGTGAGACAAGATTTAACTATCATATGAACACAGCTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGACCTGTGTGAGACAAGATTTAACTATCATATGAACACAGCTGG  776

seq1  ACCAGTGATATGATATGTGGAGGGTGGTTCTTTCATCTCTTTGTTTTAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGATATGATATGTGGAGGGTGGTTCTTTCATCTCTTTGTTTTAGT  826

seq1  TTTGTATTTGTTTACTATAGGAAAATACTCTGTGCTCTAGCTGGGTTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTGTTTACTATAGGAAAATACTCTGTGCTCTAGCTGGGTTTTA  876

seq1  TGGAGAAGCAGATGCAATGTGAAGGCTATGATCTTATCTTTCATGAATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGCAGATGCAATGTGAAGGCTATGATCTTATCTTTCATGAATGT  926

seq1  ATGAATTTTCTTAAGATGCTAAGTGAAGAAAACGTTTAGACACCTTTAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTTCTTAAGATGCTAAGTGAAGAAAACGTTTAGACACCTTTAAA  976

seq1  AGGTAAAAGAAACTGAACTTCTCATTTTCTGGATCATTTCATTTGTGTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAAGAAACTGAACTTCTCATTTTCTGGATCATTTCATTTGTGTTA  1026

seq1  TCACATGCTTTAAATTTCTCATTTAGAAGATTTATTATTTTTAAATGTTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGCTTTAAATTTCTCATTTAGAAGATTTATTATTTTTAAATGTTA  1076

seq1  TATGTGTGCCTGTGCTTAGGTATGTGTACAATATTTTAATTAGCTCAGAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGCCTGTGCTTAGGTATGTGTACAATATTTTAATTAGCTCAGAT  1126

seq1  TAATTGAGGTATCACGTCCCCTGTGTTGGAGTTCCATATGGTTGTAAGCT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGGTATCACGTCCCCTGTGTTGGAGTTCCATATGGTTGTAAGCT  1176

seq1  GCCTAACTTGAATTC  1213
      |||||||||||||||
seq2  GCCTAACTTGAATTC  1191


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