BAC Information

Click to search

BAC

Clone NameB6Ng01-060K22
Chromosome12 (Build37)14 (Build37)
Map Location 94,356,123 - 94,357,32884,831,094 - 84,831,666
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100039425, LOC628116
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060K22.bB6Ng01-060K22.g
ACCDH881587DH881588
length1,175985
definitionDH881587|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K22, 5' end.DH881588|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,356,123 - 94,357,328)(84,831,094 - 84,831,666)
sequence
gaattcatagcaaccaagaaaggcaagctacattatgactgggtatttct
tgaaatctcagaaatggaatttagtctagcttgttgtttccagaatgtgt
aggttttctttgacattacactttgttacttaaatttgttcatacttact
gcatgaaatggcaaacatacaaacaaagaaaagaaacagacagaactaag
aagtctttccactttacctaacaggccgcatgcagttctgattgttttct
catagatgctgatgatagagcacatttacatctgagcatgtgaggcaatg
aggttccattattctcaacataaagtcatccttgtgatttcccactaggg
gaaaatgcattctgctgtttgaagtgaggtatgtaattcaggtatactat
ctgtgggtggtgcctaaacttatactataattaattatctgtattcttct
attatatcaatgtgtcactatgggcatatttttcttttagggaaatatac
agtttttctctatcttatgacctactatttgccctaaccaccatgcaatt
tatttttttgtggcttactacaactcagaagaaattccccaaatgtttaa
atctttgtaagtggctatagaaatacaatcagtcctacaagttcagctgt
catatctgcagatacaaacaataataaacaaaaactattttttattacag
aaaatttccaaactagtaaaaaatctggagttttctatttatttatccca
catggataaagccacatgtaggctcatcctgaaacagcctcctagtgttt
tgaagattctcactctccttccagtacttgttgcttgaggactggttacc
ttatgccttgttttttactaatacgttggtagacctaagacagttgtgtc
agcagtactgtacacgtatagacttcttttattttatttttcattgccag
aatagagcaaattccaatgtttgactgcatttactttatagtagatttat
cagaaattctagagattacaaaagtgacgagttgaaatactgcatgcatt
tgatgatttgtcattatgtagtcaggacctcagaaacagcatactctctg
tctgccagaagttggccactgctttatgttaaatactatgtactaaccta
gagactgcacaagtagaggtaaata
gaattcaagtacaatgttgaataggtaggtagaaagtggacagccttgtc
tagtccctgattttagtggaattgcttccagcttctcaccatttactttt
gtgttggctactggtttgctgtagattgcttttatcaggtttaggtatgg
gccttgaattcctgatctttccaagacttttatcatgaatgggggttggt
ttttgtcaaaagctttttaagcatctaagaagatgatcatttggtttttg
tctttgactttgttcatatagtggattaggctcatggatttctgtatatt
aaaccatccctgcatccctggaatgaaacctacttggtcaggatggatga
ttgttttgatgtgttcttggattcagttagtgagaattttattgagtatt
tttgcatcaatattcataagggaaattggtctgaagccctctttctttgt
tgggtctttctgtggtttaggtatcagagtaattgtggcatcagagaatg
agttgggtagagtaccttctacttctattttgtggaatagtgtgtgcaga
actggaattagatcttctttgaaggtctgatagaactctgcactaaaccc
atctggtccttttaggggatatgggactgttcagattgttaacttgatcc
tgatttaactttggtacctggtatctgtctagaaatttgtccatttcatc
caggttttccagttttgttgagtatagccttttgtagaaggatctgattg
tgttttggatttcttcaggatctgttgttatgtctcccttttcatttctg
attttgtaatttaggatgttgtctctgtgcccactattgagtctggctaa
gggtttatctatcttgttgattttctcaaagaaccagctcctcgttttgt
tgattctttgataattcttcttgtttccacttggttgatttcgccctagt
tgattatttcccgccatcactcccatggggtgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_94356123_94357328
seq2: B6Ng01-060K22.b_49_1223 (reverse)

seq1  TATTTACCACTCTACTTTTGTTGCAAGTGTCTCTAGGTAAGATACATAAG  50
      |||||||  ||||||||    ||||   |||||||||| || ||||||  
seq2  TATTTAC--CTCTACTT---GTGCA---GTCTCTAGGTTAG-TACATA--  39

seq1  ATTATTTTTAACATTATAGGCAGTTGGCAACTTCTGGGCAGACAGAGAGT  100
          | ||||||||   | ||||| | |||||||| ||||||||||||||
seq2  ---GTATTTAACAT--AAAGCAGTGGCCAACTTCT-GGCAGACAGAGAGT  83

seq1  AATGCTTGTTTCTGAGGTCCCTTGACTACATAAATGACACATCATCAGAT  150
       |||| ||||||||||||||  ||||||||| ||||||| ||||||| ||
seq2  -ATGC-TGTTTCTGAGGTCC--TGACTACAT-AATGACAAATCATCAAAT  128

seq1  GCATGCAGTATTTTCAACTCTGTCCACTTTTTGTAATCTCTAGAATTTCT  200
      |||||||||| ||||||||| || ||| ||||||||||||||||||||| 
seq2  GCATGCAGTA-TTTCAACTC-GT-CAC-TTTTGTAATCTCTAGAATTTC-  173

seq1  TGATAAATTCTACTATAAAGTAAATGCAGTTCAAACATTGGAATTTGCTC  250
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  TGATAAA-TCTACTATAAAGTAAATGCAG-TCAAACATTGGAATTTGCTC  221

seq1  TATTCTGGCAATTGAAAAATAAAAATAAAAGAAGTCTATACGTGTACAGT  300
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  TATTCTGGCAA-TGAAAAAT-AAAATAAAAGAAGTCTATACGTGTACAGT  269

seq1  ACTGCTGACACAACTGTCTTAGGTCTACCAACGTATTAGTAAAAAACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGACACAACTGTCTTAGGTCTACCAACGTATTAGTAAAAAACAAG  319

seq1  GCATAAGGTAACCAGTCCTCAAGCAACAAGTACTGGAAGGAGAGTGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAGGTAACCAGTCCTCAAGCAACAAGTACTGGAAGGAGAGTGAGAA  369

seq1  TCTTCAAAACACTAGGAGGCTGTTTCAGGATGAGCCTACATGTGGCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAAACACTAGGAGGCTGTTTCAGGATGAGCCTACATGTGGCTTTA  419

seq1  TCCATGTGGGATAAATAAATAGAAAACTCCAGATTTTTTACTAGTTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGGGATAAATAAATAGAAAACTCCAGATTTTTTACTAGTTTGGA  469

seq1  AATTTTCTGTAATAAAAAATAGTTTTTGTTTATTATTGTTTGTATCTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTGTAATAAAAAATAGTTTTTGTTTATTATTGTTTGTATCTGCA  519

seq1  GATATGACAGCTGAACTTGTAGGACTGATTGTATTTCTATAGCCACTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGACAGCTGAACTTGTAGGACTGATTGTATTTCTATAGCCACTTAC  569

seq1  AAAGATTTAAACATTTGGGGAATTTCTTCTGAGTTGTAGTAAGCCACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTAAACATTTGGGGAATTTCTTCTGAGTTGTAGTAAGCCACAAA  619

seq1  AAAATAAATTGCATGGTGGTTAGGGCAAATAGTAGGTCATAAGATAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATTGCATGGTGGTTAGGGCAAATAGTAGGTCATAAGATAGAGA  669

seq1  AAAACTGTATATTTCCCTAAAAGAAAAATATGCCCATAGTGACACATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTATATTTCCCTAAAAGAAAAATATGCCCATAGTGACACATTGA  719

seq1  TATAATAGAAGAATACAGATAATTAATTATAGTATAAGTTTAGGCACCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGAAGAATACAGATAATTAATTATAGTATAAGTTTAGGCACCAC  769

seq1  CCACAGATAGTATACCTGAATTACATACCTCACTTCAAACAGCAGAATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATAGTATACCTGAATTACATACCTCACTTCAAACAGCAGAATGC  819

seq1  ATTTTCCCCTAGTGGGAAATCACAAGGATGACTTTATGTTGAGAATAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCCCTAGTGGGAAATCACAAGGATGACTTTATGTTGAGAATAATG  869

seq1  GAACCTCATTGCCTCACATGCTCAGATGTAAATGTGCTCTATCATCAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCATTGCCTCACATGCTCAGATGTAAATGTGCTCTATCATCAGCA  919

seq1  TCTATGAGAAAACAATCAGAACTGCATGCGGCCTGTTAGGTAAAGTGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGAAAACAATCAGAACTGCATGCGGCCTGTTAGGTAAAGTGGAA  969

seq1  AGACTTCTTAGTTCTGTCTGTTTCTTTTCTTTGTTTGTATGTTTGCCATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTTAGTTCTGTCTGTTTCTTTTCTTTGTTTGTATGTTTGCCATT  1019

seq1  TCATGCAGTAAGTATGAACAAATTTAAGTAACAAAGTGTAATGTCAAAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAGTAAGTATGAACAAATTTAAGTAACAAAGTGTAATGTCAAAGA  1069

seq1  AAACCTACACATTCTGGAAACAACAAGCTAGACTAAATTCCATTTCTGAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTACACATTCTGGAAACAACAAGCTAGACTAAATTCCATTTCTGAG  1119

seq1  ATTTCAAGAAATACCCAGTCATAATGTAGCTTGCCTTTCTTGGTTGCTAT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAGAAATACCCAGTCATAATGTAGCTTGCCTTTCTTGGTTGCTAT  1169

seq1  GAATTC  1206
      ||||||
seq2  GAATTC  1175

seq1: chr14_84831094_84831666
seq2: B6Ng01-060K22.g_528_1051 (reverse)

seq1  ATTCACCCAAGAGGAGTAGATGGCAGGAAATAATCAAACTCAGTGGTGAA  50
      |||||||| |  ||||| |||||| |||||||||| |||| || || |||
seq2  ATTCACCCCATGGGAGT-GATGGCGGGAAATAATC-AACT-AG-GGCGAA  46

seq1  ATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAG  100
      ||||||||||||||||||||||||| || ||||||||| ||| |||||||
seq2  ATCAACCAAGTGGAAACAAGAAGAATTA-TCAAAGAATCAACAAAACGAG  95

seq1  GAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGAC  150
      ||| ||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGCTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCCAGAC  145

seq1  TCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAA  200
      ||| ||  |||||||| ||||| ||||||| | |||||||||||||||||
seq2  TCAATAGTGGGCACAGAGACAACATCCTAAATTACAAAATCAGAAATGAA  195

seq1  AAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATC  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACACAATCAGATC  245

seq1  CTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGACGAAATGG  300
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTGGATGAAATGG  295

seq1  ACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTT  350
      |||||||||| ||||||||||||||||||||||| |||||||||||||||
seq2  ACAAATTTCTAGACAGATACCAGGTACCAAAGTTAAATCAGGATCAAGTT  345

seq1  GACCATCTAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATCAA  400
       || |||| |||||||||||||| ||||||                    
seq2  AACAATCTGAACAGTCCCATATCCCCTAAA--------------------  375

seq1  TAGTCTCCCAACCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGT  450
                              ||||||||| ||||||||||||||||
seq2  ------------------------AGGACCAGATGGGTTTAGTGCAGAGT  401

seq1  TCTATCAGACCTTCAAAAAAGGTCTAATTCCAGTTCTCCACAAACTATTT  500
      ||||||||||||||||| ||| ||||||||||||||| |||| |||||| 
seq2  TCTATCAGACCTTCAAAGAAGATCTAATTCCAGTTCTGCACACACTATTC  451

seq1  CACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCAC  550
      |||||||||||||||||||||||||||||||||||||| | ||| |||||
seq2  CACAAAATAGAAGTAGAAGGTACTCTACCCAACTCATTCTCTGATGCCAC  501

seq1  TATTACTCTGATACCTAAACCAC  573
       ||||||||||||||||||||||
seq2  AATTACTCTGATACCTAAACCAC  524