BAC Information

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BAC

Clone NameB6Ng01-061G02
Chromosome12 (Build37)
Map Location 21,803,950 - 21,973,290
singlet/doubletdoublet
Overlap gene6030426L16Rik, LOC434693
Upstream geneLOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796
Downstream geneEG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660, EG668662, LOC668664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061G02.bB6Ng01-061G02.g
ACCDH882075DH882076
length1,1281,108
definitionDH882075|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G02, 5' end.DH882076|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,972,134 - 21,973,290)(21,803,950 - 21,805,059)
sequence
gaattcatcaggtagactgaagtggaagtcagccctagtggatgaaaggt
tggttggtttctgttaagcacagaagaccatgtggtaatctgggttcaaa
gcattctttttggattatgttttctcgagacagagtctcactatgtagtc
ctggcttacctggaactcactatggagatcaggctggcctcaaactcaca
gagatctatctgtccctgcctctcaagtgctgggattcaaggcatgtacc
actatgcctggatttcaaaatgttctttcatttccaatcagggagatact
ttgaaaatgcaaaccttcttgaagtggtttggtgactttccatgagcaga
caacctgagtttgatcctgtgacctaaatcatgggaagatagaacaacca
attcctgcaagttgccctctgacttcatgctagggcaaatgcacactccc
ttatatgaatgctccagccccacccctcccaaacactaattgtgtaatga
taaataaagcaggaactggggctgaagaggtggctcagtagttaagagca
atgactgctcttccaggggtcctgagttcaatttcaaacaaccacatgga
ggctcacaaccatctgtaatggggtctgatggtctcttctagtgtgtctg
aaaacagctacattgtactcatatgcatacaatagataaacctttaaaaa
aataaagcaagaactgagtgaggaaatacctgagtcaatagactatggtt
caatctctgggtacaagcaaggttggaggagaagtgaggcagcacagtca
ggcattttgggccatgaaggatctcttagagcatattgaagaatttaggg
tttattcctagactgtagggagaacctggaagatttttgagccgcttaaa
actacattgctttcttagaaggatcactatgggaaagagtctggcaccca
gtaaacagggtgattggaaagttcattaacccagagatgggaagatttgt
tataaatatactgcagatgaggagaaactaaattggataaggcacaattg
gaatgagggctcaggaccacagtgctcatggataataactgaaatatcat
cagtgacacatgggattctttgcaactg
gaattcacacagatccatctacctctgcctcatgagtagtgggattaaag
gagaacctcaccaccatctgtctatgatagagtcattctgtaaggcccag
gccagccttgaactcaagacactcctcagtctgctgaaattactgggcac
agcaggccttaagtgctcttttgaaggacatgaaagacattgctgcaagc
aggagagggcagaggcctccaattcgttcccccagtccctctacagatgg
atgtcttgtgcaatcagtccaggtgggatggagtcagaataggcttctct
gctttgctgctcagcacccaggctcaggttggcatgttgtcccaggctgg
aggcagcaggttctttggggtccctgaaccagctatggaatgactaacac
atgggctcctgattggctgggatgactgtttatatcaactgtactctgat
gctggaggtcaagtagccagcaatggcctttccccagtagtgaggggaat
ggcatggggcctctaggactggttctgcatggtcaatgtctcaggctgcc
ctggccaatggccagcacccaacactactattgggagggtccagcagtaa
cccaagggttatgagccaggcgtagcatagtgcagggtagaatatctctc
actgccctgactgagcctatgtgtgtccctaaaaggagctgcagtttact
ggtcagtatgcaatgggacatgcagatttggtggtccctgggtcaatccc
tgcctacagccttcccttctagccatatgttcttgctaccttgatttctg
agtcctgtctccttagttttaaaccaagagtgaaggtccctgtgtgtgga
gtttacagtcttatttctatgaaaggaagggaaacagaagctatgaggag
acagagacaaactgaaccatcaggcaaatgctcggtggggacattggagg
attttactgtgaaagacacaggctttctcatggagcttcatctgagttca
gcaccttgtgaggatagaagtcatcggactggaaagctttctcttgcagg
tcaacacctagtcagttgcattaaatctggttgtggcctggtaagacctg
gggtcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_21972134_21973290
seq2: B6Ng01-061G02.b_49_1173 (reverse)

seq1  CAGTTGGCAACGAAT-CCATGTGTCACTGGATTGGATATTTCAGTTTATT  49
      ||||| |||| |||| |||||||||||| |||  |||||||||| |||||
seq2  CAGTT-GCAAAGAATCCCATGTGTCACT-GAT--GATATTTCAG-TTATT  45

seq1  ATCCATGGGCACTGTGGTCCTGAGCCCTCATTTCCCATTGTGCCTTTATC  99
      ||||||| |||||||||||||||||||||| |||| |||||||| |||||
seq2  ATCCATGAGCACTGTGGTCCTGAGCCCTCA-TTCCAATTGTGCC-TTATC  93

seq1  CATTTAGGTCTCTCCTCATCTGCAAGTGTTATTTTATAATAAATCTTCCA  149
      || ||  || ||||||||||||||   ||   ||||||| ||||||||| 
seq2  CAATTTAGTTTCTCCTCATCTGCA---GTATATTTATAACAAATCTTCCC  140

seq1  ATCTCTGGGTTAATGAACTTTCCAATCACCCTGTTTACTGGGTGCCAGAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGGTTAATGAACTTTCCAATCACCCTGTTTACTGGGTGCCAGAC  190

seq1  TCTTTCCCATAGTGATCCTTCTAAGAAGCAAATGTAGTTTTAAGCGGCTC  249
      |||||||||||||||||||||||||||   ||||||||||||||||||||
seq2  TCTTTCCCATAGTGATCCTTCTAAGAAAGCAATGTAGTTTTAAGCGGCTC  240

seq1  -AAAATCTTCCAGGGTCTCCCTACAGTCTACGAATAAACCCTAAATTCTT  298
       ||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  AAAAATCTTCCAGGTTCTCCCTACAGTCTAGGAATAAACCCTAAATTCTT  290

seq1  CAATATGCTCTAAGAGATCCTTCATGGCCCAAAATGCCTGACTGTGCTGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGCTCTAAGAGATCCTTCATGGCCCAAAATGCCTGACTGTGCTGC  340

seq1  CTCACTTCTCCTCCAACCTTGCTTGTACCCAGAGATTGAACCATAGTCTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTCTCCTCCAACCTTGCTTGTACCCAGAGATTGAACCATAGTCTA  390

seq1  TTGACTCAGGTATTTCCTCACTCAGTTCTTGCTTTATTTTTTTAAAGGTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAGGTATTTCCTCACTCAGTTCTTGCTTTATTTTTTTAAAGGTT  440

seq1  TATCTATTGTATGCATATGAGTACAATGTAGCTGTTTTCAGACACACTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTGTATGCATATGAGTACAATGTAGCTGTTTTCAGACACACTAG  490

seq1  AAGAGACCATCAGACCCCATTACAGATGGTTGTGAGCCACCATGTGGTTG  548
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGAGACCATCAGACCCCATTACAGATGGTTGTGAGCCTCCATGTGGTTG  540

seq1  CTTGAAATTGAACTCAGGACCCCTGGAAGAGCAGTCATTGCTCTTAACTA  598
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATTGAACTCAGGACCCCTGGAAGAGCAGTCATTGCTCTTAACTA  590

seq1  CTGAGCCACCTCTTCAGCCCCAGTTCCTGCTTTATTTATCATTACACAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCACCTCTTCAGCCCCAGTTCCTGCTTTATTTATCATTACACAAT  640

seq1  TAGTGTTTGGGAGGGGTGGGGCTGGAGCATACATATAAGGGAGTGTGCAT  698
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGTGTTTGGGAGGGGTGGGGCTGGAGCATTCATATAAGGGAGTGTGCAT  690

seq1  TTGCCCTAGCATGAGGTCAGAGGGCAACTTGCAGGAATTGGTTGTTCTAT  748
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTGCCCTAGCATGAAGTCAGAGGGCAACTTGCAGGAATTGGTTGTTCTAT  740

seq1  CTTCCCATGATTTAGGTCACAGGATCAAACTCAGTTTGTCTGCTCATGGA  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTCCCATGATTTAGGTCACAGGATCAAACTCAGGTTGTCTGCTCATGGA  790

seq1  AAGTCACCAAACCACTTCAAGAAGGTTTGCATTTTCAAAGTATCTCCCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACCAAACCACTTCAAGAAGGTTTGCATTTTCAAAGTATCTCCCTG  840

seq1  ATTGGAAATGAAAGAACATTTTGAAATCCAGGCATAGTGGTACATGCCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAATGAAAGAACATTTTGAAATCCAGGCATAGTGGTACATGCCTT  890

seq1  GAATCCCAGCACTTGAGAGGCAGGGACAGATAGATCTCTGTGAGTTTGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCAGCACTTGAGAGGCAGGGACAGATAGATCTCTGTGAGTTTGAG  940

seq1  GCCAGCCTGATCTCCATAGTGGGTTCCAGGTAAGCCAGGACTACATAGTG  998
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCAGCCTGATCTCCATAGTGAGTTCCAGGTAAGCCAGGACTACATAGTG  990

seq1  AGACTCTGTCTCGAGAAAACATAATCCAAAAAGAATGCTTTGAACCCAGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGTCTCGAGAAAACATAATCCAAAAAGAATGCTTTGAACCCAGA  1040

seq1  TTACCAGAATGCTTTGAACCCAGAATACCACATGGTGTTCTGTGCTTAAC  1098
      |                        ||||||||||| |||||||||||||
seq2  T------------------------TACCACATGGTCTTCTGTGCTTAAC  1066

seq1  AGAAACCAACCAACCTTTCATCCACTAGGGCTGACTTCCACTTCAGTCTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAACCAACCTTTCATCCACTAGGGCTGACTTCCACTTCAGTCTA  1116

seq1  CCTGATGAA  1157
      |||||||||
seq2  CCTGATGAA  1125

seq1: chr12_21803950_21805059
seq2: B6Ng01-061G02.g_74_1177

seq1  TCACACAGATCCATCTACCTCTGCCTCATGAGTACTGGGATTAAAGGAGA  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCACACAGATCCATCTACCTCTGCCTCATGAGTAGTGGGATTAAAGGAGA  50

seq1  ACCTTACCACCATCTGGCTATGAT--AGTCTTTCTATTCAGCCCAGGCCA  98
      |||| ||||||||||| |||||||  |||| |||| |   ||||||||||
seq2  ACCTCACCACCATCTGTCTATGATAGAGTCATTCTGTAAGGCCCAGGCCA  100

seq1  GCCTTGAATTCAAGACACTCCTCAGTTGACTAAAATTACTGGAGCACAGC  148
      |||||||| |||||||||||||||||   || |||||||||| |||||||
seq2  GCCTTGAACTCAAGACACTCCTCAGTCTGCTGAAATTACTGG-GCACAGC  149

seq1  ATGCCTTAAGTGCTCTTTTGAAGGATATGTAAGACATTGCTGCAAGCAGG  198
      | ||||||||||||||||||||||| ||| ||||||||||||||||||||
seq2  AGGCCTTAAGTGCTCTTTTGAAGGACATGAAAGACATTGCTGCAAGCAGG  199

seq1  AGAGGGCAGAGGCCTCCAATTCGTTCCCCCAGTCCCTCTACAGATGGACG  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGAGGGCAGAGGCCTCCAATTCGTTCCCCCAGTCCCTCTACAGATGGATG  249

seq1  TCTTGTGCAGTCAGTCCTGGTGGGATTGAGTCAGAATAGGCTTCTCTGCC  298
      ||||||||| ||||||| |||||||| |||||||||||||||||||||| 
seq2  TCTTGTGCAATCAGTCCAGGTGGGATGGAGTCAGAATAGGCTTCTCTGCT  299

seq1  TTGCTGCTCAGCACTCAGGCTCAGGTTGGCACGTTGTCCCAGGCTGGAGG  348
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  TTGCTGCTCAGCACCCAGGCTCAGGTTGGCATGTTGTCCCAGGCTGGAGG  349

seq1  CAGCAGGTTCTTTGGGGTCCCTGAACCAGCTATGGAATGACTCACACATG  398
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CAGCAGGTTCTTTGGGGTCCCTGAACCAGCTATGGAATGACTAACACATG  399

seq1  GGCTCCTGATTGGCTGGGATGACAGGTCATAACAACTGTGCTCTGATGCT  448
      ||||||||||||||||||||||| | | ||| ||||||| ||||||||||
seq2  GGCTCCTGATTGGCTGGGATGACTGTTTATATCAACTGTACTCTGATGCT  449

seq1  GCAGGCCAAGAAGCCAGCAACGGCCTTTCCCCAGTAGCCAGGGGAATGGC  498
      | ||| |||| ||||||||| ||||||||||||||||  |||||||||||
seq2  GGAGGTCAAGTAGCCAGCAATGGCCTTTCCCCAGTAGTGAGGGGAATGGC  499

seq1  ATGGGGCCTCTAGGACTGGTTCTGCATGGTCAATGACTCAGGTTGCCCGG  548
      ||||||||||||||||||||||||||||||||||| |||||| ||||| |
seq2  ATGGGGCCTCTAGGACTGGTTCTGCATGGTCAATGTCTCAGGCTGCCCTG  549

seq1  GCCAGTGGCCAGCACCCAACACTCC---TGGGAGGGTCCAGCAGTAACCC  595
      |||| |||||||||||||||||| |   ||||||||||||||||||||||
seq2  GCCAATGGCCAGCACCCAACACTACTATTGGGAGGGTCCAGCAGTAACCC  599

seq1  AGGGGTGCTGAGCCAGGCCTCGAAAAGAACAAGGTAGAATATCTCTCATT  645
      | ||||  |||||||||| | | | ||  || |||||||||||||||| |
seq2  AAGGGTTATGAGCCAGGCGTAGCATAGTGCAGGGTAGAATATCTCTCACT  649

seq1  GTTCCTGACTGAGCCTATGTGTGTCCCTCTCTAAAAGGAGCTGCAGTTCA  695
      |  |||||||||||||||||||||||    |||||||||||||||||| |
seq2  G-CCCTGACTGAGCCTATGTGTGTCC----CTAAAAGGAGCTGCAGTTTA  694

seq1  CTGTGTCAGGCTGCAATGGGACATGCAGATTTGGTGGTCCCTGGGTCAAT  745
      ||| |||||  |||||||||||||||||||||||||||||||||||||||
seq2  CTG-GTCAGTATGCAATGGGACATGCAGATTTGGTGGTCCCTGGGTCAAT  743

seq1  CCCTGCCTACAGCCTTCCCTTCTACCCATATGTTCTTGCTACCTTGATTT  795
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  CCCTGCCTACAGCCTTCCCTTCTAGCCATATGTTCTTGCTACCTTGATT-  792

seq1  CTCTGAGTCCTGTCTCCTTAGCTGTAAACCAAGAGTGAAGGTCCCTGTGT  845
       |||||||||||||||||||| | ||||||||||||||||||||||||||
seq2  -TCTGAGTCCTGTCTCCTTAGTTTTAAACCAAGAGTGAAGGTCCCTGTGT  841

seq1  GTGGCGTTTACAG-CCTATTTCTATGAAAGGAAGGGAAACAGAAGCTATG  894
      |||| |||||||| | ||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTTACAGTCTTATTTCTATGAAAGGAAGGGAAACAGAAGCTATG  891

seq1  AGGAGACAGAG--AAACTGAACCACCAGGCAAATGCTCGGTGGGGACATT  942
      |||||||||||  ||||||||||| |||||||||||||||||||||||||
seq2  AGGAGACAGAGACAAACTGAACCATCAGGCAAATGCTCGGTGGGGACATT  941

seq1  GGAGGACTTTTACTGTGAAAGACCACAGGCTTCCTCAATGAGCTCCATCT  992
      |||||| ||||||||||||||| ||||||||| ||||  ||||| |||||
seq2  GGAGGA-TTTTACTGTGAAAGA-CACAGGCTTTCTCATGGAGCTTCATCT  989

seq1  GAGTACAGCACCCTGTGAGGAGGGAAGCCACCGACCTGAAAAGC-TTCTC  1041
      |||| ||||||| ||||||||  |||| || ||  ||| ||||| |||||
seq2  GAGTTCAGCACCTTGTGAGGATAGAAGTCATCGGACTGGAAAGCTTTCTC  1039

seq1  TTACAGGTC-ACACCTAGCGCAGTGGCATTAAAAACCGTGTTCTGTGCTG  1090
      || |||||| ||||||||  |||| |||||  ||| |  ||| ||  |||
seq2  TTGCAGGTCAACACCTAG-TCAGTTGCATT--AAATCTGGTTGTGGCCTG  1086

seq1  GTAAAGAGCCTGGGGTCACT  1110
      || |||| ||||||||||||
seq2  GT-AAGA-CCTGGGGTCACT  1104