BAC Information

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BAC

Clone NameB6Ng01-061N07
Chromosome12 (Build37)
Map Location 4,965,701 - 4,966,760
singlet/doubletsinglet
Overlap geneAtad2b
Upstream geneC030014M07Rik, C330021A05Rik, Adcy3, Cenpo, 2410017P09Rik, Ncoa1, LOC100041995, LOC100042005, LOC100042014, Itsn2, 4930417G10Rik, A830093I24Rik, Pfn4, EG626534, 0610009D07Rik, Fkbp1b, BC068281, Gm1964, Ubxd4
Downstream geneLOC668332, Klhl29, 2810032G03Rik, LOC435292, LOC100042095, LOC672098
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061N07.bB6Ng01-061N07.g
ACCDH882404DH882405
length1,0601,132
definitionDH882404|Mus musculus domesticus DNA, BAC clone: B6Ng01-061N07, 5' end.DH882405|Mus musculus domesticus DNA, BAC clone: B6Ng01-061N07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaaatcacgtgtttacaatctagcatggtctgagtaagtata
tctcaaacattcattttttaaatttctgaaccattagggtagcacttaga
ttaaaaggtggtacaatgttcaggaggccatgtgtcataggtctggccta
ctatttcacctttcctttccgactaatgaactataatgtgagaagttttg
ttctgacatttgctccagcatcatgtactttgttagcaaggtactaatcg
aggctaagaccagcaaacatgagagcagatgtacttgttctccacctagg
aaactggcccaagcacttactatagtgacaggaaagcatctacaatacaa
ctatgacagtaaatagcatagggttttataagattcctcccacaaatatt
taacattttctatgtgtgccatttcctcagtaacactataatctacgatt
actttccatcccaggtttccagtgagactaacagtcaaccacagcaggtg
ctttgtggatcaccatcatcatcctcagagtcctaggacgtgggcctaag
tgtaaggagattcacctctgcgagctctgcacacttcatgcagcttcaat
cacgcacaccaaaaatggtttgtaatcttgcatctgtacaaacatgtaca
aagattttttccttgtctttacttaaaagtaacagatgtgcccagtctat
ggcccatgtgtcccttatctatgaatacagtccaaaccaagattataaat
ttacttaaaaagttatgatatattttttgtgtattttttttaagtttcaa
ttgtctggttctggagaaaacaacatgttcttgcaaaatcaaaggttgga
cacatctgctcacactgtttatataataaatatattgcatgagatatttt
aagaatgtagaaatgtcattaagcatcataaagatgtatataagctatat
taaatcctttacaattttattttatagacgaaacatctgcagattttgga
atctctggggactggctagaatcagtttctccacaataacagaggttagt
atggcttaca
gaattcagaactcttcagctggggaacagggtacgtgtaagtatagcttt
acaaggtaagtctggccttgaactttctaacgaaattcaagacagtctat
cagaagtaaagtgggaaatagctttacaaggtatgtttgaccttgaactt
tctctagtgttaggagcctttttgttccttttcacatgttatcaagtggt
taaggcagggctgaaaattctggatgaaattcagggcaatctatcagaag
taaagcggggagagagagtaggagcaaagaggaaatatggttcacaaaat
aagtatacaggcctttccaagggtcttgaacccgaggaaaagtttaggtc
aggtaagaatacctggggagagattagaaggaagaaaaaagaaaagaaaa
aagatcaattagcggaggtttctaggagaaggagcctatactcatcacta
gatgagctcaaggagccagttcttaatagttctgaatcagatgaaaaggc
tattagggcctggaaggcgctctcccgagcaggtgaagccactggacaac
taacaaagatcgtccagagacctcaggagtcattctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttggagattcggagcaagccgc
acctctggtagaatagctcatttatgagcaagccacgcaggaatgcagag
cggccatagccccaagaaagaacaaaggtttacaagactggctcagggtt
tgtcgggagcttgggggacctctcattatgcgttacttccattcagtatg
agaaattactagggtagctaatttgtcaaaaagtctttctaagtatatgt
tacagaattggacggctgaatttgaacagaccctttcaggaattgagacc
cttcgggaattgagacttcaggtcactccacgcacttggacctgtccctg
atcaaaggattacccgattggatctcctcagcattttcctccttaagatg
ggtgggattgatataataggagatcacttgcctgtggaataatgttgctc
ttggtgtgtctgcagcttaaggcccaacctagaagacaggtagtaatgcc
caggccttgcactcctaaaacacgaggcttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_4965701_4966760
seq2: B6Ng01-061N07.b_50_1109 (reverse)

seq1  TGTAAGCCATACTTACCCTCTGTTATTTGTGG-GAAACTGATTCTAG-CA  48
      |||||||||||| || ||||||||| |||||| |||||||||||||| ||
seq2  TGTAAGCCATAC-TAACCTCTGTTA-TTGTGGAGAAACTGATTCTAGCCA  48

seq1  GTCCCCAG-GATTCCAAAATCTGCAGATGTTTTCGTCTAATAAATAAAAT  97
      |||||||| |||||||||||||||||||| |||||||||  |||||||||
seq2  GTCCCCAGAGATTCCAAAATCTGCAGATG-TTTCGTCTATAAAATAAAAT  97

seq1  AGTAAAGGATTTAAATATAGCTTATATACATCTTTATGTATGCTTAATGA  147
       ||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  TGTAAAGGATTT-AATATAGCTTATATACATCTTTATG-ATGCTTAATGA  145

seq1  CATTTCTACATTCTTATAATATCTCATGCAATATATTTATTATATAAACA  197
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CATTTCTACATTCTTAAAATATCTCATGCAATATATTTATTATATAAACA  195

seq1  GTGTGAGCAGATGTGTCCAACCTTTTGATTTTGCAAGAACATGTTGTTTT  247
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGTGAGCAGATGTGTCCAACC-TTTGATTTTGCAAGAACATGTTGTTTT  244

seq1  CTCCAGAACCAGACAATTG-AACTTAAAAAAAATACAC-AAAAATATATC  295
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  CTCCAGAACCAGACAATTGAAACTTAAAAAAAATACACAAAAAATATATC  294

seq1  ATAACTTTTTAAGTAAATTTATAATCTTGGTTTGGACTGTATTCATAGAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTTTAAGTAAATTTATAATCTTGGTTTGGACTGTATTCATAGAT  344

seq1  AAGGGACACATGGGCCATAGACTGGGCACATCTGTTAC-TTTAAGTAAAG  394
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGGGACACATGGGCCATAGACTGGGCACATCTGTTACTTTTAAGTAAAG  394

seq1  ACAAGGAAAAAATCTTTGTACATGTTTGTACAGATGCAAGATTACAAACC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAAAAAATCTTTGTACATGTTTGTACAGATGCAAGATTACAAACC  444

seq1  ATTTTTGGTGTGCGTGATTGAAGCTGCATGAAGTGTGCAGAGCTCGCAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGTGTGCGTGATTGAAGCTGCATGAAGTGTGCAGAGCTCGCAGA  494

seq1  GGTGAATCTCCTTACACTTAGGCCCACGTCCTAGGACTCTGAGGATGATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATCTCCTTACACTTAGGCCCACGTCCTAGGACTCTGAGGATGATG  544

seq1  ATGGTGATCCACAAAGCACCTGCTGTGGTTGACTGTTAGTCTCACTGGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATCCACAAAGCACCTGCTGTGGTTGACTGTTAGTCTCACTGGAA  594

seq1  ACCTGGGATGGAAAGTAATCGTAGATTATAGTGTTACTGAGGAAATGGCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGATGGAAAGTAATCGTAGATTATAGTGTTACTGAGGAAATGGCA  644

seq1  CACATAGAAAATGTTAAATATTTGTGGGAGGAATCTTATAAAACCCTATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAAAATGTTAAATATTTGTGGGAGGAATCTTATAAAACCCTATG  694

seq1  CTATTTACTGTCATAGTTGTATTGTAGATGCTTTCCTGTCACTATAGTAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTACTGTCATAGTTGTATTGTAGATGCTTTCCTGTCACTATAGTAA  744

seq1  GTGCTTGGGCCAGTTTCCTAGGTGGAGAACAAGTACATCTGCTCTCATGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGGGCCAGTTTCCTAGGTGGAGAACAAGTACATCTGCTCTCATGT  794

seq1  TTGCTGGTCTTAGCCTCGATTAGTACCTTGCTAACAAAGTACATGATGCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTCTTAGCCTCGATTAGTACCTTGCTAACAAAGTACATGATGCT  844

seq1  GGAGCAAATGTCAGAACAAAACTTCTCACATTATAGTTCATTAGTCGGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAATGTCAGAACAAAACTTCTCACATTATAGTTCATTAGTCGGAA  894

seq1  AGGAAAGGTGAAATAGTAGGCCAGACCTATGACACATGGCCTCCTGAACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGTGAAATAGTAGGCCAGACCTATGACACATGGCCTCCTGAACA  944

seq1  TTGTACCACCTTTTAATCTAAGTGCTACCCTAATGGTTCAGAAATTTAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACCACCTTTTAATCTAAGTGCTACCCTAATGGTTCAGAAATTTAAA  994

seq1  AAATGAATGTTTGAGATATACTTACTCAGACCATGCTAGATTGTAAACAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATGTTTGAGATATACTTACTCAGACCATGCTAGATTGTAAACAC  1044

seq1  GTGATTTGTGGAATTC  1060
      ||||||||||||||||
seq2  GTGATTTGTGGAATTC  1060