BAC Information

Click to search

BAC

Clone NameB6Ng01-061P23
Chromosome12 (Build37)
Map Location 78,710,790 - 78,711,908
singlet/doubletsinglet
Overlap genenone
Upstream geneSpnb1, Churc1, Gpx2, Rab15, Fntb, Max, LOC100041765, LOC100041772, Fut8
Downstream geneLOC230765, LOC666659, EG626215, Gphn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061P23.bB6Ng01-061P23.g
ACCDH882522DH882523
length1,116252
definitionDH882522|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P23, 5' end.DH882523|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctttatttaaaggccctaaaattcccggtctactttgaaatg
actgatgagaacacccgatgtctattttccaaagcaaaccctaatctaat
tctgaactatgacctgttagacaagacttggattgtccagtttgtctaat
gatattttggtgaaaagaggaccagttcctaccaacattatagaaataat
cacattacaatagaaggtatggaaagccttttaaaaattcctgatatttg
agtactcttcaagaatacggtattttttaaatgtttcatttgaatttaaa
aaacaaacaaacacatagttcactagattgttgttggttctcttaataga
tccagaaaataaaacactgaagatcacaatattctagaaaagcatggtaa
actcacctcatctgtttacccagtgacataatgaactcttggttcttttg
gagctcaacagcctccactaaggggaattttggcagtggtttgctgcaca
agttgtctatccttggtctcagaccagaggtgtttcagattgtacttttt
tctttctgattttaagagatttgcttgtggatagtgagattgctcaaaga
tgagccacaggtctaaataggcaatcacttctctttaacgggcactttat
atatgtgctgtaaagacacgttatattatactttcagtgtacctgtggtt
ttgttgtggcttcagagattagatcagatgtggaatattctgcccatgac
atcaaatcagtactttaaaagttttagatttaaggatttttagatttcag
ggtttggggaccagagatgctccactagtgcctggctcagaccttttcta
agacagtgactgtgtttctttacttaaagaataacttctgggtcacatct
aattagccttgccccaggaatacaaaagcagtcatagatagcaagctgtg
gttactttattgctggtaattttgagttgtgaaaggtctgataacacata
aaatacatgataaagtcattcacaaagtgtatttcatgggcttatgattc
aggtcagtattagaatgacagaatattcaagtcctgagttcagatcttct
tttcgtccccctctcc
tcaggcaaatggatggaaatagaaaatgttatcttgagtgaggtaatcca
gtcacaaaagaacacacatggaacatacccactgataagtggatattagg
caaaaagcttggaatacccacaatacaattcgcagaccatatgaagctca
agaataagaaagaccaaagtgtgggtgcttcagtcctacttagaagggga
aacaaaaaaaatcaagggaggtagagggtgggagggacttgggaggaaga
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_78710790_78711908
seq2: B6Ng01-061P23.b_50_1165

seq1  GAATTCCTCTTTATTTAAAGGCCCTAAAATTCCCGGTCTACTTTGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTATTTAAAGGCCCTAAAATTCCCGGTCTACTTTGAAATG  50

seq1  ACTGATGAGAACACCCGATGTCTATTTTCCAAAGCAAACCCTAATCTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGAGAACACCCGATGTCTATTTTCCAAAGCAAACCCTAATCTAAT  100

seq1  TCTGAACTATGACCTGTTAGACAAGACTTGGATTGTCCAGTTTGTCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACTATGACCTGTTAGACAAGACTTGGATTGTCCAGTTTGTCTAAT  150

seq1  GATATTTTGGTGAAAAGAGGACCAGTTCCTACCAACATTATAGAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTGGTGAAAAGAGGACCAGTTCCTACCAACATTATAGAAATAAT  200

seq1  CACATTACAATAGAAGGTATGGAAAGCCTTTTAAAAATTCCTGATATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTACAATAGAAGGTATGGAAAGCCTTTTAAAAATTCCTGATATTTG  250

seq1  AGTACTCTTCAAGAATACGGTATTTTTTAAATGTTTCATTTGAATTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTTCAAGAATACGGTATTTTTTAAATGTTTCATTTGAATTTAAA  300

seq1  AAACAAACAAACACATAGTTCACTAGATTGTTGTTGGTTCTCTTAATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACACATAGTTCACTAGATTGTTGTTGGTTCTCTTAATAGA  350

seq1  TCCAGAAAATAAAACACTGAAGATCACAATATTCTAGAAAAGCATGGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAATAAAACACTGAAGATCACAATATTCTAGAAAAGCATGGTAA  400

seq1  ACTCACCTCATCTGTTTACCCAGTGACATAATGAACTCTTGGTTCTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACCTCATCTGTTTACCCAGTGACATAATGAACTCTTGGTTCTTTTG  450

seq1  GAGCTCAACAGCCTCCACTAAGGGGAATTTTGGCAGTGGTTTGCTGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAACAGCCTCCACTAAGGGGAATTTTGGCAGTGGTTTGCTGCACA  500

seq1  AGTTGTCTATCCTTGGTCCCAGACCAGAGGTGTTTCAGATTGTACTTTTT  550
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGTTGTCTATCCTTGGTCTCAGACCAGAGGTGTTTCAGATTGTACTTTTT  550

seq1  TCTTTCTGATTTTAAGAGATTTGCTTGTGGATAGTGAGATTGCTCAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGATTTTAAGAGATTTGCTTGTGGATAGTGAGATTGCTCAAAGA  600

seq1  TGAGCCACAGGTCTAAACAGGCAATCACTTCTCTTTAACGGGCACTTTAT  650
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGAGCCACAGGTCTAAATAGGCAATCACTTCTCTTTAACGGGCACTTTAT  650

seq1  ATATGTGCTGTAAAGACACGTTATATTATACTTTCAGTGTACCTGTGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGCTGTAAAGACACGTTATATTATACTTTCAGTGTACCTGTGGTT  700

seq1  TTGTTGTGGCTTCAGAGATTAGATCAGATGTGGAATATTCTGCCCATGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGGCTTCAGAGATTAGATCAGATGTGGAATATTCTGCCCATGAC  750

seq1  ATCAAATCAGTACTTTAAAAGTTTTAGATTTAAGGATTTTTAGA-TTCAG  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATCAAATCAGTACTTTAAAAGTTTTAGATTTAAGGATTTTTAGATTTCAG  800

seq1  GGTTTGGGGACCAGAGATGCTCCACTAGTGCCTGGCTCAGACCTTTTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGGGACCAGAGATGCTCCACTAGTGCCTGGCTCAGACCTTTTCTA  850

seq1  AGACAGTGACTGTGTTTCTTTACTTAAAGAATAACTTCTGGGTCACATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGACTGTGTTTCTTTACTTAAAGAATAACTTCTGGGTCACATCT  900

seq1  AATTAGCCTTGCCCCAGGAATACAAAAGCAGTCATAGATAGCAAGCTGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGCCTTGCCCCAGGAATACAAAAGCAGTCATAGATAGCAAGCTGTG  950

seq1  GTTACTTTATTGCTGGTAATTTTGAGTTGTGAAAGGTCTGATAACACATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTATTGCTGGTAATTTTGAGTTGTGAAAGGTCTGATAACACATA  1000

seq1  AAATAACATAATAAAGCCATTCACAAAGTGTA-GTCATGGGC-TATGAAT  1047
      |||| |||| |||||| |||||||||||||||  |||||||| |||| ||
seq2  AAAT-ACATGATAAAGTCATTCACAAAGTGTATTTCATGGGCTTATG-AT  1048

seq1  TCAGGTCAGTAATAGAATGACAGAATATTCAAGTCCTGAGTTCAGTTCTT  1097
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||
seq2  TCAGGTCAGTATTAGAATGACAGAATATTCAAGTCCTGAGTTCAGATCTT  1098

seq1  TCTTTTTCCTTCCCCCCTCTCC  1119
         ||||| |  ||||||||||
seq2  --CTTTTCGT--CCCCCTCTCC  1116