BAC Information

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BAC

Clone NameB6Ng01-065M05
Chromosome12 (Build37)
Map Location 43,621,187 - 43,622,212
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065M05.bB6Ng01-065M05.g
ACCDH885145DH885146
length1,2341,011
definitionDH885145|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M05, 5' end.DH885146|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcagtcctttcatgtccaaaggcagttccttgtactagtctta
ttgaacctcttgctctttcaatctttgcagttctcttctgtgacattccc
ttttaaggaggggctgttagacagatgtttggagttagtactccattata
aattattctctgctcttttatcagttgcaagtatctctattaaccattac
ctactgcataaagaactttttgtgatgaagattgagacctaccctaatct
atgaaatagggttcataactcatgacaccaaaaaacatttacttatagaa
taacaaccttgatataaggggtaaaaccataaactctcagaaaaaaacac
aggggtacttcttcatgatcttggaatctcagatacaccaataaaaaggt
tcagaaaaataaatgaaaaattggtaattttatgtatcctgagacaccat
caagagactgaaaaggcaatctatagaactggaaaattttaattataaac
cataaatagtgtataaagttcttccatctagaatacataaagaactctgc
acctagagacataagctttccatcaaaaacgaagtgaagaaaagacaaac
acttctcaatagaatgcttgcaaacagctaaatatacaagaaaaatactc
agcatcattaaacctttaattttgcattaagaaatgcaaattaaagtcac
aatgatatggtacttcataagcactaaggtgccaatgaattgattcacta
acttaattgaattaatttaataaaatgtgctagccaggatgtacaaacac
tcatatactgctagcgggaatgtaaaatataatgacgaggttttgacagt
tccttaagattttggacatattattagtagtagctccatggattagtttc
cagattaatattccaaagaaattaaaaaccatatggcttggtgtacaatt
ttcctagaagcctttatttatgagaagagagagataaaaaattagttaaa
ccccaaagatgaccaatagatcaagacattaagaatgctattttactact
tcttaaaggacgcaccctccccttaccccggagaggacgggaaagagagg
gaacaaataaaagaaaagcgctaatccttgagttggagtttaaaatatat
actaaatcattgaaattcctggcagcatacaaggaaactattgtggacga
ggtgtaccaaccgtgttgggtatggcccgggtat
gaattccatgaatagtgaaggctgttgtgtttttatgatgatactcatct
cctggtctgtgtcctcacaaggtagaatggatagaggaagaacagtgcct
agctatattacttcataactttggaagatattgaacttatccattagata
aatacaatttcccaggataggagctatctctttgcactgctgaaattggg
atagaacattcaaaggttacagacatcaaggcactgtcaggtctatgtct
tcggccagactaaacaatgaacaaacactgtgatctaggatgaagaggag
atatttttgagacaaatcttcaaagaagtgaggtatgaaggagaagaaac
acttctacataatcataatagaagcctccagtaaccacatggagcaccct
gagctggtaacattcttgaactgtgccattttgaattcatatagtcagtt
gaggctccctagtactatttatcatgagggttcatagttggttttgagaa
taactcaaattgtttggtagtcactaagcaccataaaatatacaattaga
atacaagtgttctttttaaaattcaacttctaatagtttggttttatgga
caccaaggaagaacactaaacaaagaatggagctgacccccctatttcag
tcataacaatcctatacattatttagaacctcttcatttctgctgattat
tatctaacatagaacatattatatagcacggtttaatttaaaagccagat
aaaaacgtgtatgctgagggtgggagcaatggtaagtgtagcagaagctt
gccaaagcactgaatttttttccacgggtcaataaactggctttgattta
cttctaatgaatacagtatttaacaccttttcagaaactggtttggcttc
ggggaaacacctcaaataatctatgaaagacatatttaacactagttatg
attcctggcacaataataaaaattctgaaattctatagcttattcactag
tcattcagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43621187_43622212
seq2: B6Ng01-065M05.g_71_1081

seq1  GAATTCCATGAATAGTGAAGGCTGTTGTGTTTTTATGATGATACTCATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAATAGTGAAGGCTGTTGTGTTTTTATGATGATACTCATCT  50

seq1  CCTGGTCTGTGTCCTCACAAGGTAGAATGGATAGAGGAAGAACAGTGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTGTGTCCTCACAAGGTAGAATGGATAGAGGAAGAACAGTGCCT  100

seq1  AGCTATATTACTTCATAACTTTGGAAGATATTGAACTTATCCATTAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATATTACTTCATAACTTTGGAAGATATTGAACTTATCCATTAGATA  150

seq1  AATACAATTTCCCAGGATAGGAGCTATCTCTTTGCACTGCTGAAATTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATTTCCCAGGATAGGAGCTATCTCTTTGCACTGCTGAAATTGGG  200

seq1  ATAGAACATTCAAAGGTTACAGACATCAAGGCACTGTCAGGTCTATGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACATTCAAAGGTTACAGACATCAAGGCACTGTCAGGTCTATGTCT  250

seq1  TCGGCCAGACTAAACAATGAACAAACACTGTGATCTAGGATGAAGAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCAGACTAAACAATGAACAAACACTGTGATCTAGGATGAAGAGGAG  300

seq1  ATATTTTTGAGACAAATCTTCAAAGAAGTGAGGTATGAAGGAGAAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTGAGACAAATCTTCAAAGAAGTGAGGTATGAAGGAGAAGAAAC  350

seq1  ACTTCTACATAATCATAATAGAAGCCTCCAGTAACCACATGGAGCACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTACATAATCATAATAGAAGCCTCCAGTAACCACATGGAGCACCCT  400

seq1  GAGCTGGTAACATTCTTGAACTGTGCCATTTTGAATTCATATAGTCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGTAACATTCTTGAACTGTGCCATTTTGAATTCATATAGTCAGTT  450

seq1  GAGGCTCCCTAGTACTATTTATCATGAGGGTTCATAGTTGGTTTTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCCCTAGTACTATTTATCATGAGGGTTCATAGTTGGTTTTGAGAA  500

seq1  TAACTCAAATTGTTTGGTAGTCACTAAGCACCATAAAATATACAATTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAAATTGTTTGGTAGTCACTAAGCACCATAAAATATACAATTAGA  550

seq1  ATACAAGTGTTCTTTTTAAAATTCAACTTCTAATAGTTTGGTTTTATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAGTGTTCTTTTTAAAATTCAACTTCTAATAGTTTGGTTTTATGGA  600

seq1  CACCAAGGAAGAACACTAAACAAAGAATGGAGCTGA-CCCCCTATTTCAG  649
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CACCAAGGAAGAACACTAAACAAAGAATGGAGCTGACCCCCCTATTTCAG  650

seq1  TCATAACAATCCTATACATTATTTAGAACCTCTTCATTTCTGCTGATTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACAATCCTATACATTATTTAGAACCTCTTCATTTCTGCTGATTAT  700

seq1  TATCTAACATAGAACATATTATATAGCACGGTTTAATTTAAAAGCCAGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACATAGAACATATTATATAGCACGGTTTAATTTAAAAGCCAGAT  750

seq1  AAAAACGTGTATGCTGAGGGTGGGAGCAATGGTAAGTGTAGCAGAAGCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACGTGTATGCTGAGGGTGGGAGCAATGGTAAGTGTAGCAGAAGCTT  800

seq1  GCCAAAGCACTGAA-TTTTTTCCACAGGTCAATTAACTGGCTTTGATTTA  848
      |||||||||||||| |||||||||| ||||||| ||||||||||||||||
seq2  GCCAAAGCACTGAATTTTTTTCCACGGGTCAATAAACTGGCTTTGATTTA  850

seq1  CTTCTAATGAATACAGTATTTTAACAGCATTTTCAAGAAACT-GTTTGGC  897
      |||||||||||||||||| ||||||| | ||||| ||||||| |||||||
seq2  CTTCTAATGAATACAGTA-TTTAACA-CCTTTTC-AGAAACTGGTTTGGC  897

seq1  TTCAGGTGAAACACCTCAAAATAATCTATGAAAGACATAGTATAAGCACT  947
      ||| || |||||||||| ||||||||||||||||||||| | ||| ||||
seq2  TTC-GGGGAAACACCTC-AAATAATCTATGAAAGACATA-TTTAA-CACT  943

seq1  AGTTAATGATATCCTGGCAACAAATAATAAAAAAATTTCTGAAAATTTCT  997
      |||| ||||| ||||||||   |||||||||||   ||||||||  ||||
seq2  AGTT-ATGAT-TCCTGGCA--CAATAATAAAAA---TTCTGAAA--TTCT  984

seq1  ATAGCCTTATTCACTAAGTCATTCAGCGT  1026
      |||| |||||||||| |||||||||||||
seq2  ATAG-CTTATTCACT-AGTCATTCAGCGT  1011