BAC Information

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BAC

Clone NameB6Ng01-065M15
Chromosome12 (Build37)
Map Location 46,784,816 - 46,785,770
singlet/doubletsinglet
Overlap genenone
Upstream geneStxbp6
Downstream geneLOC664952
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065M15.bB6Ng01-065M15.g
ACCDH885162DH885163
length1,070787
definitionDH885162|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M15, 5' end.DH885163|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgagtaaacttgaagggctaagaagcacctaaaaaaatg
ttcaacatccttagccatcagggaaaatcaaaacaatcctgagattccac
ctcatagcagtcagaatggctaagatcaaacactcaggtgagagcagata
ctggtgaggatgtggagaaagagaaacactcctccattgttggtgggatt
gcaagctggtacaatcactctgaaaatcagtctggcagttcctcagaaaa
ttggacatagtagtacctgaagaaggctatataactcctgagcacatatc
taaagatgctccaacacgtagtaaggacacatgctccagtatattcataa
cagccatatttataatagctggaagctggaaacaacccttttgtccctca
acagaggaatggatacaaaatgtggtacatttacacaatggagtactact
cagatattaaaaacaatgagttcatgaaactcacagacaaatgtatgtaa
cttgaaaatatcatgctgagtgaggtaactcagtcataaaagaacaaaca
tggtatgtactcactgataagtggatgttagctcaaaagtttagaatacc
caagattcaattcacataccatatgaatagtgtaattcttactgcatata
gataatctctacaattccctttcatttcattttcttgttatatcaaccat
tgagatgcatgtgtgttttgtatcactttattacaaactatacaaaaaac
atacatgaaaaacctttgcacaaatatgtcctccaaaactaagattaaaa
accatatatgctatggtgtagtttctcctgaaagtcactgcttttaattt
ttcagctcatgtttgtaaaatgtgcatagatacttcttaccctactcatg
aggaaaaatctcttcttttaagtatagaagctaggagcaggtatgaaatg
catctatttagaattatagaaagatattatgatgggaaagctactgctat
taaagccttcaggatactatttgaaggactttgggtcttggggcttcttg
gagtgatgtaaatctcagtc
gaattctgtttatctccgtacaccattttaaatagggttatttcattctc
tggcatctaacttcttgagttctttgtatatattggatataagccctcta
tcagatttaggattattaaaaatcttttcacatctggttagttgcctttt
tgtctcattgacagtgtcctttgccttacagaaccttcgcaattttatga
ggtcccatttgtcaacttttgatcttaccgtacaagccactggtgttttg
ttcaggaatttttcccatgtgcccatatgtttgaggttctttcccacttt
ctcctctataaatttaagtttctctggttttatgtagatgttcttgattc
acttggatttgagctttgtacaaggagataagaatggatcaatttgcatt
cttctacatgataaccgccagttgaactagcatcatttcttgaaaatgct
gcctttttcccactggatggttttagcttccttgtcaaagaccaagtgac
catagctgtgtgggttcatttctgggtcttcaattctattacatagatct
acctgtctgtcactgtaccaataccatgcaatttttaatcacaattgctc
tgtagtactgcttgagttcagggatggtgatttctgcagaagttctttta
gtgtttagaatagtttttgctatcctaggtttttttgttattccaaatga
atttgcaaatttccctgtcttactctgtgaagaattgagttgtaattttt
gaaggggattacattttaatctgttgattgtttttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_46784816_46785770
seq2: B6Ng01-065M15.b_171_1113

seq1  AAACACTCAGGTGAGAGCAGATACTGGTGAGGATGTGGAGAAAGAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTCAGGTGAGAGCAGATACTGGTGAGGATGTGGAGAAAGAGAAAC  50

seq1  ACTCCTCCATTGTTGGTGGGATTGCAAGCTGGTACAATCACTCTGAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCCATTGTTGGTGGGATTGCAAGCTGGTACAATCACTCTGAAAAT  100

seq1  CAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTAGTACCTGAAGAAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGGCAGTTCCTCAGAAAATTGGACATAGTAGTACCTGAAGAAGGC  150

seq1  TATATAACTCCTGAGCACATATCTAAAGATGCTCCAACACGTAGTAAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAACTCCTGAGCACATATCTAAAGATGCTCCAACACGTAGTAAGGA  200

seq1  CACATGCTCCAGTATATTCATAACAGCCATATTTATAATAGCTGGAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTCCAGTATATTCATAACAGCCATATTTATAATAGCTGGAAGCT  250

seq1  GGAAACAACCCTTTTGTCCCTCAACAGAGGAATGGATACAAAATGTGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAACCCTTTTGTCCCTCAACAGAGGAATGGATACAAAATGTGGTA  300

seq1  CATTTACACAATGGAGTACTACTCAGATATTAAAAACAATGAGTTCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACACAATGGAGTACTACTCAGATATTAAAAACAATGAGTTCATGA  350

seq1  AACTCACAGACAAATGTATGTAACTTGAAAATATCATGCTGAGTGAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACAGACAAATGTATGTAACTTGAAAATATCATGCTGAGTGAGGTA  400

seq1  ACTCAGTCATAAAAGAACAAACATGGTATGTACTCACTGATAAGTGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTCATAAAAGAACAAACATGGTATGTACTCACTGATAAGTGGATG  450

seq1  TTAGCTCAAAAGTTTAGAATACCCAAGATTCAATTCACATACCATATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCAAAAGTTTAGAATACCCAAGATTCAATTCACATACCATATGAA  500

seq1  TAGTGTAATTCTTACTGCATATAGATAATCTCTACAATTCCCTTTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAATTCTTACTGCATATAGATAATCTCTACAATTCCCTTTCATTT  550

seq1  CATTTTCTTGTTATATCAACCATTGAGATGCATGTGTGTTTTGTATCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTGTTATATCAACCATTGAGATGCATGTGTGTTTTGTATCACT  600

seq1  TAATTACAAACTATACAAAAAACATACATGAAAAACCTTTGCACAAATAT  650
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACAAACTATACAAAAAACATACATGAAAAACCTTTGCACAAATAT  650

seq1  GTCCTCCAAAACTAAGATTAAAAACCATATATGCTATGGTGTAGTTTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCAAAACTAAGATTAAAAACCATATATGCTATGGTGTAGTTTCTC  700

seq1  CTGAAAAGTCACTGCTTTTAATTTTTCAGCTCATGTTTTGTAAGAATGTG  750
      ||| ||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  CTG-AAAGTCACTGCTTTTAATTTTTCAGCTCATG-TTTGTAA-AATGTG  747

seq1  CATAGATACTTC-TACCCTACTCATGA-GAAAAATCTCTTCTTTTTAAGT  798
      |||||||||||| |||||||||||||| ||||||||||||| ||||||||
seq2  CATAGATACTTCTTACCCTACTCATGAGGAAAAATCTCTTC-TTTTAAGT  796

seq1  ATAGAAGCTAGGGAGCAGGGTATGAAATGCAATCTATTTAGAATTATAGA  848
      |||||||||| |||||| |||||||||||| |||||||||||||||||||
seq2  ATAGAAGCTA-GGAGCA-GGTATGAAATGC-ATCTATTTAGAATTATAGA  843

seq1  AAGATATTAATGATGGGAAAGCTACTGCCTATTAAAGCCTTCAGGAATAC  898
      |||||||| |||||||||||||||||| ||||||||||||||||| ||||
seq2  AAGATATT-ATGATGGGAAAGCTACTG-CTATTAAAGCCTTCAGG-ATAC  890

seq1  TATTTGAAAGACTTTTGTGTCTTGTGGCTTCTTTGAAGTGAATGTAAATC  948
      |||||||| ||| |||| |||||| |||||| ||| |||| |||||||| 
seq2  TATTTGAAGGAC-TTTGGGTCTTGGGGCTTC-TTGGAGTG-ATGTAAAT-  936

seq1  CTCAGTC  955
      |||||||
seq2  CTCAGTC  943