BAC Information

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BAC

Clone NameB6Ng01-066C18
Chromosome12 (Build37)
Map Location 8,085,395 - 8,196,582
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668380, EG668388, Apob
Downstream gene1110057K04Rik, Gdf7, Hs1bp3, BC106175, Rhob, Slc7a15, LOC100043154, Pum2, F730043H23, Sdc1, Laptm4a, Matn3, Wdr35, Ttc32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066C18.bB6Ng01-066C18.g
ACCDH885423DH885424
length1641,187
definitionDH885423|Mus musculus domesticus DNA, BAC clone: B6Ng01-066C18, 5' end.DH885424|Mus musculus domesticus DNA, BAC clone: B6Ng01-066C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,196,419 - 8,196,582)(8,085,395 - 8,086,593)
sequence
gaattcttaactgaaactgacaaaatgaaatggagtttgaaaagaaatgg
tgaattctgatatcattaaatcctcccaatgtttggttctggagccattt
atttttaataatgtttcaggaagactaggaaagctgtgtgctctcctctc
ctccccctcctccc
gaattcaaaagctacaggggactctgctatgcaagggcatggttaacaat
ggccctgatgtgtctccacaaagtagtctagaagccctaacacatgctca
gggatgttgcatccctccagaaaatggatccctgggaagaacttctcttc
tctccttacagggcttgcttggtagattatctgaataacaactctgttcc
ttgtttttctcctacacatagacactggtgactaacaaaagccaatgcct
ttctgattttagagccaagattttgacctgactttggttaagtccctaag
tcatgatgtcacttcttggagtaggattagactgaaggagacaatcactt
gggttcctctgggcctacaaaccctagtggaaaaagtagcaagacttgac
tctgagagtttgagttgttataacaaaatatataaggtagatgacttaaa
caacaaatatttatcacagttctgaagctgccaacagattctttgtctgg
taaggctgtaacaacgctcttcctggtttgtagattgtaagcttcctatc
ttcatagtgatggaacggtaggaggactctagtcttttcttcttcccatc
atgaggcctcacctccatgacttcatctaaacctacttacctccaaatac
catgatagtggagaaatggagcctcaccatttgaactctgggaaaataca
ttcagtctgaagcagcgctgatgaaggagcatagccctccagctgttgga
caaggcatcttgaagcagcactccatgtttatcacaccctcacagcacac
cctgcctctcccttcctttctctctgaccacctgcttgctgcctaaaggc
ttgtattgtaatcctggggaacctcatgctctcttccaagtctccattcc
cagaccattgcgtagcctgagccttcacactcattctttagagagagtga
agactttgagtataagcagaggttactgggaaacctttgctcctgtagtt
ccagattcatctctgaggacctgcagattctagcttgttagtgtactcat
ttgctaaaagccaaatcagtacttgaacccaagaaaactgactctttttg
gtacttgggagtttcagggtgtgaactgtaattggatcttattctctctc
ctgcacaaagagaagggttgctaagaaatagagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_8196419_8196582
seq2: B6Ng01-066C18.b_31_194 (reverse)

seq1  GGGAGGAGGGGGAGGAGAGGAGAGCACACAGCTTTCCTAGTCTTCCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAGGGGGAGGAGAGGAGAGCACACAGCTTTCCTAGTCTTCCTGAA  50

seq1  ACATTATTAAAAATAAATGGCTCCAGAACCAAACATTGGGAGGATTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTAAAAATAAATGGCTCCAGAACCAAACATTGGGAGGATTTAAT  100

seq1  GATATCAGAATTCACCATTTCTTTTCAAACTCCATTTCATTTTGTCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAGAATTCACCATTTCTTTTCAAACTCCATTTCATTTTGTCAGTT  150

seq1  TCAGTTAAGAATTC  164
      ||||||||||||||
seq2  TCAGTTAAGAATTC  164

seq1: chr12_8085395_8086593
seq2: B6Ng01-066C18.g_68_1254

seq1  GAATTCAAAAGCTACAGGGGACTCTGCTATGCAAGGGCATGGTTAACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGCTACAGGGGACTCTGCTATGCAAGGGCATGGTTAACAAT  50

seq1  GGCCCTGATGTGTCTCCACAAAGTAGTCTAGAAGCCCTAACACATGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGATGTGTCTCCACAAAGTAGTCTAGAAGCCCTAACACATGCTCA  100

seq1  GGGATGTTGCATCCCTCCAGAAAATGGATCCCTGGGAAGAACTTCTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTTGCATCCCTCCAGAAAATGGATCCCTGGGAAGAACTTCTCTTC  150

seq1  TCTCCTTACAGGGCTTGCTTGGTAGATTATCTGAATAACAACTCTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTACAGGGCTTGCTTGGTAGATTATCTGAATAACAACTCTGTTCC  200

seq1  TTGTTTTTCTCCTACACATAGACACTGGTGACTAACAAAAGCCAATGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTCTCCTACACATAGACACTGGTGACTAACAAAAGCCAATGCCT  250

seq1  TTCTGATTTTAGAGCCAAGATTTTGACCTGACTTTGGTTAAGTCCCTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTTTAGAGCCAAGATTTTGACCTGACTTTGGTTAAGTCCCTAAG  300

seq1  TCATGATGTCACTTCTTGGAGTAGGATTAGACTGAAGGAGACAATCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATGTCACTTCTTGGAGTAGGATTAGACTGAAGGAGACAATCACTT  350

seq1  GGGTTCCTCTGGGCCTACAAACCCTAGTGGAAAAAGTAGCAAGACTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCTCTGGGCCTACAAACCCTAGTGGAAAAAGTAGCAAGACTTGAC  400

seq1  TCTGAGAGTTTGAGTTGTTATAACAAAATATATAAGGTAGATGACTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAGTTTGAGTTGTTATAACAAAATATATAAGGTAGATGACTTAAA  450

seq1  CAACAAATATTTATCACAGTTCTGAAGCTGCCAACAGATTCTTTGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATATTTATCACAGTTCTGAAGCTGCCAACAGATTCTTTGTCTGG  500

seq1  TAAGGCTGTAACAACGCTCTTCCTGGTTTGTAGATTGTAAGCTTCCTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTGTAACAACGCTCTTCCTGGTTTGTAGATTGTAAGCTTCCTATC  550

seq1  TTCATAGTGATGGAACGGTAGGAGGACTCTAGTCTTTTCTTCTTCCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTGATGGAACGGTAGGAGGACTCTAGTCTTTTCTTCTTCCCATC  600

seq1  ATGAGGCCTCACCTCCATGACTTCATCTAAACCTACTTACCTCCAAATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCCTCACCTCCATGACTTCATCTAAACCTACTTACCTCCAAATAC  650

seq1  CATGATAGTGGAGAAATGGAGCCTCACCATTTGAACTCTGGGAAAATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAGTGGAGAAATGGAGCCTCACCATTTGAACTCTGGGAAAATACA  700

seq1  TTCAGTCTGAAGCAGCGCTGATGAAGGAGCATAGCCCTCCAGCTGTTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCTGAAGCAGCGCTGATGAAGGAGCATAGCCCTCCAGCTGTTGGA  750

seq1  CAAGGCATCTTGAAGCAGCACTCCATGTTTATCACACCCTCACAGCACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCATCTTGAAGCAGCACTCCATGTTTATCACACCCTCACAGCACAC  800

seq1  CCTGCCTCTCCCTTCCTTTCTCTCTGACCACCTGCTTGCTGCCTAAAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTCCCTTCCTTTCTCTCTGACCACCTGCTTGCTGCCTAAAGGC  850

seq1  TTGTATTGTAATCCTGGGGAACCTCAATGCTCTCTTCCAAGTCTCCATTC  900
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTGTATTGTAATCCTGGGGAACCTC-ATGCTCTCTTCCAAGTCTCCATTC  899

seq1  CCAGACCATTGCGTAGCCTGAGCCTTCACACCCATTCTTTAGAGAGAGTG  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCAGACCATTGCGTAGCCTGAGCCTTCACACTCATTCTTTAGAGAGAGTG  949

seq1  AAGACTTTGAGTATAAGCCAGAGGGTAACTGGAAACCCTTTGCTCCTGTA  1000
      ||||||||||||||||| |||| ||| ||||| || ||||||||||||||
seq2  AAGACTTTGAGTATAAG-CAGA-GGTTACTGGGAAACCTTTGCTCCTGTA  997

seq1  GTTCCCAGATTCATCCTCTGAGGACCTGCAGATTCTAGCTTGTTAGTGTA  1050
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTT-CCAGATTCAT-CTCTGAGGACCTGCAGATTCTAGCTTGTTAGTGTA  1045

seq1  CTCATTTGCTAAAAGCCAAATCAGTATCTTGAACCCAAGAAACACTGACT  1100
      |||||||||||||||||||||||||| ||||||||||||||| |||||||
seq2  CTCATTTGCTAAAAGCCAAATCAGTA-CTTGAACCCAAGAAA-ACTGACT  1093

seq1  CTTTTTTGGTACTT-GGAGTTCCAGGGTGTGAAACTGTAAGTTGATCTCA  1149
      | |||||||||||| |||||| ||||||||| |||||||| | ||||| |
seq2  C-TTTTTGGTACTTGGGAGTTTCAGGGTGTG-AACTGTAATTGGATCTTA  1141

seq1  TTCATCCTCCTGCACCAGAGAGAGAGTGTGTGCTAAGAAATTAGAGAAGC  1199
      |||   |||||||| || ||||| || || |||||||||| |||||||||
seq2  TTCTCTCTCCTGCA-CAAAGAGA-AGGGT-TGCTAAGAAA-TAGAGAAGC  1187