BAC Information

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BAC

Clone NameB6Ng01-066P12
Chromosome12 (Build37)
Map Location 107,584,404 - 107,753,773
singlet/doubletdoublet
Overlap geneLOC100040420, 1700121N20Rik, LOC100041191, LOC100040451
Upstream gene2810011L19Rik, LOC100040339, EG668081, D430019H16Rik, Bdkrb2, Bdkrb1, 2410024A21Rik, 4933433P14Rik, Ak7, Papola, Vrk1, LOC100040386, LOC100040404
Downstream geneLOC673604, LOC100040484, LOC382635, LOC100041251
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066P12.bB6Ng01-066P12.g
ACCDH885999DH886000
length124777
definitionDH885999|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P12, 5' end.DH886000|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,753,650 - 107,753,773)(107,584,404 - 107,585,180)
sequence
gaattcaactttgtgagtccccagacctggcatttgatgaagagcctctg
agacagtttggaaccagaggcaggaagaagacaggactgaagggcggggg
cagcctggggggtgggggtggggg
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaaacttcttaaagg
tttgttctttttattgcatgtaaatttcagctgcaatggggaactaagac
aaacacgatgcttagtacagggcgagcttggtgtgatccgagcatggagc
ctctgatggctgcggtgtggtgtgattagcagagcagcagaagggtcaga
gaactgatgtctgcatggagagatggaaagaagaatgtcatcacagagtt
gtgtcttagccaggggttcccaacccatattctccacacagagccctggc
cactggaacagaggtgcaccactacagtgtttctgtgtcagggggcttag
agtgctaccctggtgcctccctcagggtttggagtcctgccaggctgttc
ttgcagttccttgtaatgtaaagttttgtccatggaaatgccaagtggct
tgtatgccaaggtagacctatttcacggtttggttgctcgctgagggaat
ccagttgtccgggtgtgatgctctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_107753650_107753773
seq2: B6Ng01-066P12.b_41_164 (reverse)

seq1  CCCCCACCCCCACCCCCCAGGCTGCCCCCGCCCTTCAGTCCTGTCTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCCACCCCCCAGGCTGCCCCCGCCCTTCAGTCCTGTCTTCTT  50

seq1  CCTGCCTCTGGTTCCAAACTGTCTCAGAGGCTCTTCATCAAATGCCAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCTGGTTCCAAACTGTCTCAGAGGCTCTTCATCAAATGCCAGGT  100

seq1  CTGGGGACTCACAAAGTTGAATTC  124
      ||||||||||||||||||||||||
seq2  CTGGGGACTCACAAAGTTGAATTC  124

seq1: chr12_107584404_107585180
seq2: B6Ng01-066P12.g_71_847

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAAGGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAAGGGGGTTATTTGATT  50

seq1  TTCTGAGGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAGTCTGTTGGTGGTCT  150

seq1  TTTTGTCTTATAGACAGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATAGACAGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA  200

seq1  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT  250

seq1  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAAACTTCTTAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAAACTTCTTAAAGG  300

seq1  TTTGTTCTTTTTATTGCATGTAAATTTCAGCTGCAATGGGGAACTAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTTTATTGCATGTAAATTTCAGCTGCAATGGGGAACTAAGAC  350

seq1  AAACACGATGCTTAGTACAGGGCGAGCTTGGTGTGATCCGAGCATGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGATGCTTAGTACAGGGCGAGCTTGGTGTGATCCGAGCATGGAGC  400

seq1  CTCTGATGGCTGCGGTGTGGTGTGATTAGCAGAGCAGCAGAAGGGTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGGCTGCGGTGTGGTGTGATTAGCAGAGCAGCAGAAGGGTCAGA  450

seq1  GAACTGATGTCTGCATGGAGAGATGGAAAGAAGAATGTCATCACAGAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGATGTCTGCATGGAGAGATGGAAAGAAGAATGTCATCACAGAGTT  500

seq1  GTGTCTTAGCCAGGGGTTCCCAACCCATATTCTCCACACAGAGCCCTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTAGCCAGGGGTTCCCAACCCATATTCTCCACACAGAGCCCTGGC  550

seq1  CACTGGAACAGAGGTGCACCACTACAGTGTTTCTGTGTCAGGGGGCTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAACAGAGGTGCACCACTACAGTGTTTCTGTGTCAGGGGGCTTAG  600

seq1  AGTGCTACCCTGGTGCCTCCCTCAGGGTTTGGAGTCCTGCCAGGCTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTACCCTGGTGCCTCCCTCAGGGTTTGGAGTCCTGCCAGGCTGTTC  650

seq1  TTGCAGTTCCTTGTAATGTAAAGTTTTGTCCATGGAAATGCCAAGTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTCCTTGTAATGTAAAGTTTTGTCCATGGAAATGCCAAGTGGCT  700

seq1  TGTATGCCAAGGTAGACCTATTTCACGGTTTGGTTGCTCGCTGAGGGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCAAGGTAGACCTATTTCACGGTTTGGTTGCTCGCTGAGGGAAT  750

seq1  CCAGTTGTCCGGGTGTGATGCTCTCCA  777
      |||||||||||||||||||||||||||
seq2  CCAGTTGTCCGGGTGTGATGCTCTCCA  777