BAC Information

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BAC

Clone NameB6Ng01-066P14
Chromosome12 (Build37)
Map Location 113,394,110 - 113,542,981
singlet/doubletdoublet
Overlap geneKif26a
Upstream gene4930595D18Rik, Traf3, Amn, Cdc42bpb, A230065H16Rik, 1200009I06Rik, Tnfaip2, Gm266, Eif5, Mark3, Ckb, 6720458F09Rik, Bag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik
Downstream geneA730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639, AW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121, Igh, Igh-2, Gm900, Igh-1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066P14.bB6Ng01-066P14.g
ACCDH886003DH886004
length1,087812
definitionDH886003|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P14, 5' end.DH886004|Mus musculus domesticus DNA, BAC clone: B6Ng01-066P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,542,049 - 113,542,981)(113,394,110 - 113,394,920)
sequence
gaattccaggacagccagggccacacagagaaaccctgtctcgaaaaacc
aaaataaataaataaataataaagagagagagaaagagagagagagagag
agcagaggtcaaaaagcaaggcagttgttaacttcaggaaacacagaaga
caaaaggaagcacaactggacgacactgttggactgggctgtgaatgaag
cataggagagaagtaaccatggaaacattattcataaataaatgtaatat
aattgtgttgagaaaacagagaagaaacaaggggactggtagaatataaa
cacatttttgttttgctgtattggggaattattaaattatgtcttaattt
agaagatagccatacagacaaagctgttacaactatgtggatgtgtgaat
gcccaaaataaaatattttaaaaactacaggacgttgatcctagaaagga
gagtggaggagcctggggaagaccagtagatgattctgtcccattacaac
actttcggtgcttatgaattgggagttttaaaacatacttgttttcagta
atatataatttactagatagggttatgttaaattgtatttacttcttaat
taaagaatgaaacaaaggccaccaagaagattcaacaagtaaagtgtttg
ccgtccaagcctggtgatctctctctctctctctctctctctctctctct
ctctcacatacacacacacacacacacacacacacacacgcacacgcaca
cgcgcacgcacacacgcacgcacacgtacacacacactcagggcaatccc
aggaaaggatgaggtgggtgcagcaacaggtattcatagccacagcagtt
agagttgcagcttttctcaaaactgaagatcacattttagcaaggtgtca
cacgtataccaccagtgagcccagtttctcactggatatgctgtctccac
cttcacctgcagctccccagtctccttcgtgccttggctatgtctccaca
cggaccagtttcctgcaaatgggaaaccagccagaattccagccaagctg
cctgctccaggctgcttcaggatccaaagcacttccc
gaattccaggggcatcagctaatggcgacctgatctgccaggcacttctc
agcctggaaaccatccagaatttacggagtagtccattaatcaggcggct
ggcatgatactgggtctgacagaggtcactcttttatctgccttgggctc
tgggtgggtggaaatggggccaaggaggaaagaccttcgtcatgataggt
cccttgcctctctcacctttggccacagccttcactgctttgagcattat
gggcacaagcgaccagcccctgggcatgctgaggaaacatgcatttctgg
gataaatgaatgagacacttttgtgggatggatgacttcagccgtctggt
ctgagaaatgggtatatctgggaaggctgctgtattggagtcaggtgttg
tgagaaaacccttgggacctgtatggtcagcttagtgtgtggaagtgcct
gaaactggacagaaaggaggccaaggctggagctggtggagtggaccact
gatcctgggctcttaggatgacagctgtagcttcactaggctgtgtttgt
ttaagggactgtactacatgggcctggacaggagagcagggaattggatc
aggatgggtgttttgccctagttaggtcactctgagcctgacccagcccc
agtctctctgtgggaggtgtgtgtgtccacatacagggtgctgtgtccct
ccggggaggtattgtccctttgggggggggtgtccttccctctgggtggg
aatctcatccccccgacctattcctgctttgagggtcctcttcttgcctg
tctctggacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_113542049_113542981
seq2: B6Ng01-066P14.b_210_1134 (reverse)

seq1  GGGATGTGCTCTGGATCCTGAAGCAGCCTGGAGCAGGCAGCCTGGGCTGG  50
      |||| ||||| ||||||||||||||||||||||||||||| || |||| |
seq2  GGGAAGTGCTTTGGATCCTGAAGCAGCCTGGAGCAGGCAG-CTTGGCT-G  48

seq1  GACTCCTGGCTGGTTTCACAGTCTGCAGGAAACTGTGCCGTGTGGAGACA  100
      || | |||||||||||| || | ||||||||||||  |||||||||||||
seq2  GAATTCTGGCTGGTTTCCCA-TTTGCAGGAAACTGGTCCGTGTGGAGACA  97

seq1  TAGCCAAGGCACGAAGGAGACTGGGGAGCCTGCAGGTGGAGGTGGGAGAC  150
      |||||||||||||||||||||||||||| ||||||||| |||| ||||||
seq2  TAGCCAAGGCACGAAGGAGACTGGGGAG-CTGCAGGTGAAGGT-GGAGAC  145

seq1  AGCATATTCCAGGTGAGAAACTGGGCTCACTGGTGGTATACGTGTGACAC  200
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  AGCATA-TCCA-GTGAGAAACTGGGCTCACTGGTGGTATACGTGTGACAC  193

seq1  CTTTGCT-AAATGTGATCTTCAGTTTTTGAGAAAAGCTGCAACTCTAACT  249
      | ||||| ||||||||||||||| ||||||||||||||||||||||||||
seq2  C-TTGCTAAAATGTGATCTTCAG-TTTTGAGAAAAGCTGCAACTCTAACT  241

seq1  GCTGTGGCTATGAATACCTGTTGCTGCACCCACCTCATCCTTTCCTGGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGCTATGAATACCTGTTGCTGCACCCACCTCATCCTTTCCTGGGA  291

seq1  TTGCCCTGAGTGTGTGTGTACGTGTGCGTGCGTGTGTGCGTGTGCGTGTG  349
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGCCCTGAGTGTGTGTGTACGTGTGCGTGCGTGTGTGCGTGCGCGTGTG  341

seq1  CGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGAGAGAGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGAGAGAGAG  391

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGATCACCAGGCTTGGACGGCAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGATCACCAGGCTTGGACGGCAAA  441

seq1  CACTTTACTTGTTGAATCTTCTTGGTGGCCTTTGTTTCATTCTTTAATTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTACTTGTTGAATCTTCTTGGTGGCCTTTGTTTCATTCTTTAATTA  491

seq1  AGAAGTAAATACAATTTAACATAACCCTATCTAGTAAATTATATATTACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAAATACAATTTAACATAACCCTATCTAGTAAATTATATATTACT  541

seq1  GAAAACAAGTATGTTTTAAAACTCCCAATTCATAAGCACCGAAAGTGTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAGTATGTTTTAAAACTCCCAATTCATAAGCACCGAAAGTGTTG  591

seq1  TAATGGGACAGAATCATCTACTGGTCTTCCCCAGGCTCCTCCACTCTCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGGACAGAATCATCTACTGGTCTTCCCCAGGCTCCTCCACTCTCCT  641

seq1  TTCTAGGATCAACGTCCTGTAGTTTTTAAAATATTTTATTTTGGGCATTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGATCAACGTCCTGTAGTTTTTAAAATATTTTATTTTGGGCATTC  691

seq1  ACACATCCACATAGTTGTAACAGCTTTGTCTGTATGGCTATCTTCTAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCCACATAGTTGTAACAGCTTTGTCTGTATGGCTATCTTCTAAAT  741

seq1  TAAGACATAATTTAATAATTCCCCAATACAGCAAAACAAAAATGTGTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATAATTTAATAATTCCCCAATACAGCAAAACAAAAATGTGTTTA  791

seq1  TATTCTACCAGTCCCCTTGTTTCTTCTCTGTTTTCTCAACACAATTATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTACCAGTCCCCTTGTTTCTTCTCTGTTTTCTCAACACAATTATAT  841

seq1  TACATTTATTTATGAATAATGTTTCCATGGTTACTTCTCTCCTATGCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATTTATGAATAATGTTTCCATGGTTACTTCTCTCCTATGCTTC  891

seq1  ATTCACAGCCCAGTCCAACAGTGTCGTCCAGTTG  933
      ||||||||||||||||||||||||||||||||||
seq2  ATTCACAGCCCAGTCCAACAGTGTCGTCCAGTTG  925

seq1: chr12_113394110_113394920
seq2: B6Ng01-066P14.g_71_881

seq1  GAATTCCAGGGGCATCAGCTAATGGCGACCTGATCTGCCAGGCACTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGGCATCAGCTAATGGCGACCTGATCTGCCAGGCACTTCTC  50

seq1  AGCCTGGAAACCATCCAGAATTTACGGAGTAGTCCATTAATCAGGCGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAAACCATCCAGAATTTACGGAGTAGTCCATTAATCAGGCGGCT  100

seq1  GGCATGATACTGGGTCTGACAGAGGTCACTCTTTTATCTGCCTTGGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGATACTGGGTCTGACAGAGGTCACTCTTTTATCTGCCTTGGGCTC  150

seq1  TGGGTGGGTGGAAATGGGGCCAAGGAGGAAAGACCTTCGTCATGATAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGTGGAAATGGGGCCAAGGAGGAAAGACCTTCGTCATGATAGGT  200

seq1  CCCTTGCCTCTCTCACCTTTGGCCACAGCCTTCACTGCTTTGAGCATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCCTCTCTCACCTTTGGCCACAGCCTTCACTGCTTTGAGCATTAT  250

seq1  GGGCACAAGCGACCAGCCCCTGGGCATGCTGAGGAAACATGCATTTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACAAGCGACCAGCCCCTGGGCATGCTGAGGAAACATGCATTTCTGG  300

seq1  GATAAATGAATGAGACACTTTTGTGGGATGGATGACTTCAGCCGTCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGAATGAGACACTTTTGTGGGATGGATGACTTCAGCCGTCTGGT  350

seq1  CTGAGAAATGGGTATATCTGGGAAGGCTGCTGTATTGGAGTCAGGTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAATGGGTATATCTGGGAAGGCTGCTGTATTGGAGTCAGGTGTTG  400

seq1  TGAGAAAACCCTTGGGACCTGTATGGTCAGCTTAGTGTGTGGAAGTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAACCCTTGGGACCTGTATGGTCAGCTTAGTGTGTGGAAGTGCCT  450

seq1  GAAACTGGACAGAAAGGAGGCCAAGGCTGGAGCTGGTGGAGTGGACCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGGACAGAAAGGAGGCCAAGGCTGGAGCTGGTGGAGTGGACCACT  500

seq1  GATCCTGGGCTCTTAGGATGACAGCTGTAGCTTCACTAGGCTGTGTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGGGCTCTTAGGATGACAGCTGTAGCTTCACTAGGCTGTGTTTGT  550

seq1  TTAAGGGACTGTACTACATGGGCCTGGACAGGAGAGCAGGGAATTGGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGACTGTACTACATGGGCCTGGACAGGAGAGCAGGGAATTGGATC  600

seq1  AGGATGGGTGTTTTGCCCTAGTTAGGTCACTCTGAGCCTGACCCAGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGGTGTTTTGCCCTAGTTAGGTCACTCTGAGCCTGACCCAGCCCC  650

seq1  AGTCTCTCTGTGGGAGGTGTGTGTGTCCACATACAGGGTGCTGTGTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTCTGTGGGAGGTGTGTGTGTCCACATACAGGGTGCTGTGTCCCT  700

seq1  CCGGGGAGGTATTGTCCCTTTGGGGGGGGGTGTCC-TCCCTCTGGGTGGG  749
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCGGGGAGGTATTGTCCCTTTGGGGGGGGGTGTCCTTCCCTCTGGGTGGG  750

seq1  AATCTCATCCCCCCGACCTACAGCCTGCTTTGAGGGTCCTCTTCTTGCCT  799
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  AATCTCATCCCCCCGACCTA-TTCCTGCTTTGAGGGTCCTCTTCTTGCCT  799

seq1  GTCTCTGGACAG  811
      ||||||||||||
seq2  GTCTCTGGACAG  811