BAC Information

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BAC

Clone NameB6Ng01-067F09
Chromosome12 (Build37)
Map Location 6,370,121 - 6,518,376
singlet/doubletdoublet
Overlap geneLOC100042118
Upstream geneKlhl29, 2810032G03Rik, LOC435292, LOC100042095, LOC672098, LOC100043137, LOC238049
Downstream geneLOC668380
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067F09.bB6Ng01-067F09.g
ACCDH886256DH886257
length1,0821,147
definitionDH886256|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F09, 5' end.DH886257|Mus musculus domesticus DNA, BAC clone: B6Ng01-067F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,370,121 - 6,371,199)(6,517,209 - 6,518,376)
sequence
gaattctttgtttagctctgagccccatttttaatggtgttatttgattt
tctggagtccaccttcttgagttctttacatcttttggatattggtcccc
tatctgatttaggataggtaaagatcctttcccaatctgctggtggcctt
tttgtcttattgactttgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttgtcgattctcgatcttacagtgcaagccattgctgttc
tattcaggaatttttcccctgtacccatatcttcgagggttttccctact
ttctcctctataagtttcagtgtggagttccttaatctacttagatttga
ccttagcacaaggagataggaatggatcatttcgcattcttctacatgat
aacctccagttgtgccagcaccatctgttgaaaatgctgtcttttttcca
ctggatggtttttgctcccttgtcaaagatcaagtgaccataggtgtgtg
ggttcatttctgggtagcatcagacatgtagaccaatggaataagtcaga
attcttactggaataatatgtatcaacaagtatagcaaaccacatatgta
attattgagtggaaggtaggaaatttaagtcttatgaatttaatattctt
cttttcctcactccaccatgtctcactaggtcaaatgaattaaaaatgga
tacacacaagcatatatatatattacagacacatattgatgatgataggt
ctcaaatatatatgatgtttatcacctgttctatctcatatagacataaa
tgtacgtgtatgtgtgtgtacatagcttatattttacatgcaaagaagga
aaaatttgcattgacgcatataaattaaggaagcatgcatactgacatgt
ttgcagcatcaaattatgaattactcttgcttataaccaaagtttcaata
gctgtgcacctatataaataaggcacaatgcatattcttacacttggaag
aagggttgggaaatgcgaacaatagcaacgtctcaccaacactcagtaca
ttttaagagacaatgtttcctctttgatattt

gaattcaaaaactatgtgtatggtaacttaagggttcttgttcactgatg
tgttcaaagcccttggggtaatttcagtcattagtagatacctagtgaat
tcttctcacatgaatgaaaagactacataaatactgtacccttactaaac
tttgggtgttttaagaatgactcactttaataaaataggtacaagcagat
gcatggagatatgcaaggatgtattaacacttatggatatgatatgttac
tacagatagctttggctttaagaatagatctcagaatacttggtaatata
gagagctttagcatgacatttgcaatcacaagatctgaaaccaaactagg
atcacaagaagcaagagtatgaaaagatgaacttgaatatgtgtgtatcc
ctttgcctgtgtttcacaaacatagcctatgcatgtgccaagttctcaga
aatgagtatatccctccagcaagtaggaatcgaaagcataactataaact
ctatcatcaaggtgcctacagtataaacccagaagaaaataagagaataa
tgacataataaaatggtaaataaatacacaaaatgcagaggttcactaaa
tgctaagattcaagttatagtgtggaatttgatgagcggatggtggtagc
agatgctttctgtctggtccattgagaggctctataacgaatcatcatga
tgcaataaaaaagagttttacttagaaaatgctgtgggtgcactgaaaca
ccagtgaatatgttttctcaccaatgtgaaaatgctgaagtgacagaata
atattttatatggaacttaaagtatatgtagaagcttgctgtgagatatt
ataagacatttcaaaaagaaaaaaagaaaagaaaaatggactggtgtaaa
aaatgatggaactcagagacagatactagaacaaccatttggaaaaacca
atgctttcagagatagcttttactccgctgcaggcacacccatttgtctc
agtatttctctaagtacacgtagggcttgctgaagaacgcatcactaaga
tatatagctcatgaatgattgaagccaagagtcaaaaactcttcccattt
tctttatttgaccagagctagttgacatttagggtttattattattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_6370121_6371199
seq2: B6Ng01-067F09.b_63_1127

seq1  CTGAGCCCCATTTTTAATGGTGTTATTTGATTTTCTGGAGTCCACCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCCCATTTTTAATGGTGTTATTTGATTTTCTGGAGTCCACCTTCT  50

seq1  TGAGTTCTTTACATCTTTTGGATATTGGTCCCCTATCTGATTTAGGATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCTTTACATCTTTTGGATATTGGTCCCCTATCTGATTTAGGATAG  100

seq1  GTAAAGATCCTTTCCCAATCTGCTGGTGGCCTTTTTGTCTTATTGACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGATCCTTTCCCAATCTGCTGGTGGCCTTTTTGTCTTATTGACTTT  150

seq1  GTCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGA  200

seq1  TTCTCGATCTTACAGTGCAAGCCATTGCTGTTCTATTCAGGAATTTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGATCTTACAGTGCAAGCCATTGCTGTTCTATTCAGGAATTTTTCC  250

seq1  CCTGTACCCATATCTTCGAGGGTTTTCCCTACTTTCTCCTCTATAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACCCATATCTTCGAGGGTTTTCCCTACTTTCTCCTCTATAAGTTT  300

seq1  CAGTGTGGAGTTCCTTAATCTACTTAGATTTGACCTTAGCACAAGGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGGAGTTCCTTAATCTACTTAGATTTGACCTTAGCACAAGGAGAT  350

seq1  AGGAATGGATCATTTCGCATTCTTCTACATGATAACCTCCAGTTGTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGATCATTTCGCATTCTTCTACATGATAACCTCCAGTTGTGCCA  400

seq1  GCACCATCTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATCTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTTGCTC  450

seq1  CCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTAG  500

seq1  CATCAGACATGTAGACCAATGGAATAAGTCAGAATTCTTACTGGAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGACATGTAGACCAATGGAATAAGTCAGAATTCTTACTGGAATAAT  550

seq1  ATGTATCAACAAGTATAGCAAACCACATATGTAATTATTGAGTGGAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCAACAAGTATAGCAAACCACATATGTAATTATTGAGTGGAAGGT  600

seq1  AGGAAATTTAAGTCTTATGAATTTAATATTCTTCTTTTCCTCACTCCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTTAAGTCTTATGAATTTAATATTCTTCTTTTCCTCACTCCACC  650

seq1  ATGTCTCACTAGGTCAAATGAATTAAAAATGGATACACACAAGCATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCACTAGGTCAAATGAATTAAAAATGGATACACACAAGCATATAT  700

seq1  ATATATTACAGACACATATTGATGATGATAGGTCTCAAATATATATGATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTACAGACACATATTGATGATGATAGGTCTCAAATATATATGATG  750

seq1  TTTATCACCTGTTCTATCTCATATAGACATAAATGTACGTGTATGTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCACCTGTTCTATCTCATATAGACATAAATGTACGTGTATGTGTGT  800

seq1  GTACATAGCTTATATTTTACATGCAAAGAAGGAAAAATTTGCATTGACGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATAGCTTATATTTTACATGCAAAGAAGGAAAAATTTGCATTGACGC  850

seq1  ATATAAATTAAGGAAGCATGCATACTGACATGTTTGCAGCATCAAATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATTAAGGAAGCATGCATACTGACATGTTTGCAGCATCAAATTAT  900

seq1  GAATTACTCTTGCTTATAACCAAAGTTTCAATAGCTGTGCACCTATATTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAATTACTCTTGCTTATAACCAAAGTTTCAATAGCTGTGCACCTATA-TA  949

seq1  AATAAGGCACAAATGCATATTCTTACAACTTGGGAAAGACAGGGTTGGGA  1000
      |||||||||| ||||||||||||||| ||||||  |||| ||||||||||
seq2  AATAAGGCAC-AATGCATATTCTTAC-ACTTGG--AAGA-AGGGTTGGGA  994

seq1  AATTGCGAACAATAAGCAAACGTCTCACCCAACACTCAAGTACATTTTAG  1050
      || |||||||||| ||| ||||||||| ||||||||| ||||||||||| 
seq2  AA-TGCGAACAAT-AGC-AACGTCTCA-CCAACACTC-AGTACATTTTA-  1038

seq1  AGAGACAAATGTTTCTCTTTTGGATATTT  1079
      |||||| |||||||| || || |||||||
seq2  AGAGAC-AATGTTTC-CTCTTTGATATTT  1065


seq1: chr12_6517209_6518376
seq2: B6Ng01-067F09.g_71_1217 (reverse)

seq1  AAATAA-AATAAACCCTAAATGTCAAACTTAGCCTTCCTGCTCAAAATAA  49
      |||||| |||||||||||||||||||   ||||    ||| || ||||||
seq2  AAATAATAATAAACCCTAAATGTCAA--CTAGC---TCTGGTC-AAATAA  44

seq1  AG-AAATGGGATGAGTGTTTTGACTCTTGTGGCTTTCATTATATCATGGG  98
      || |||||||| |||| ||||||||||  ||||||  || || ||||| |
seq2  AGAAAATGGGAAGAGT-TTTTGACTCT--TGGCTTCAATCAT-TCATGAG  90

seq1  TTTATATAATTCTTAGTGATGGCTGTCTTGTCAAGCAGGCCCTACTGTGT  148
        ||||||  |||||||||| ||  ||||    |||| ||||||| ||||
seq2  -CTATATA--TCTTAGTGAT-GCGTTCTT---CAGCAAGCCCTAC-GTGT  132

seq1  ACTTAGAGAAATACTGAGAACAATGGGTGTGCCCTGCAGCGGAGTAAAAA  198
      |||||||||||||||||||  |||||||||| ||||||||||||| ||||
seq2  ACTTAGAGAAATACTGAGACAAATGGGTGTG-CCTGCAGCGGAGT-AAAA  180

seq1  GCTATCTCTGAAAAGCATTGGTTTTTCCTAAATGGTTGTTCTAGTATCTG  248
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  GCTATCTCTG-AAAGCATTGGTTTTTCC-AAATGGTTGTTCTAGTATCTG  228

seq1  TCTCTGAGTTCCATCA-TTTTTACACCAGTCCATTTTTTCTTTTTCTTTT  297
      |||||||||||||||| |||||||||||||||||||||   |||||||||
seq2  TCTCTGAGTTCCATCATTTTTTACACCAGTCCATTTTT--CTTTTCTTTT  276

seq1  TTTCTTTTTGAAATGTCTTATAATATCTCACAGCAAGCTTCTACATATAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGAAATGTCTTATAATATCTCACAGCAAGCTTCTACATATAC  326

seq1  TTTAAGTTCCATATAAAATATTATTCTGTCACTTCAGCATTTTCACATTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTCCATATAAAATATTATTCTGTCACTTCAGCATTTTCACATTG  376

seq1  GTGAGAAAACATATTCACTGGTGTTTCAGTGCACCCACAGCATTTTCTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAAACATATTCACTGGTGTTTCAGTGCACCCACAGCATTTTCTAA  426

seq1  GTAAAACTCTTTTTTATTGCATCATGATGATTCGTTATAGAGCCTCTCAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTCTTTTTTATTGCATCATGATGATTCGTTATAGAGCCTCTCAA  476

seq1  TGGACCAGACAGAAAGCATCTGCTACCACCATCCGCTCATCAAATTCCAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAGACAGAAAGCATCTGCTACCACCATCCGCTCATCAAATTCCAC  526

seq1  ACTATAACTTGAATCTTAGCATTTAGTGAACCTCTGCATTTTGTGTATTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAACTTGAATCTTAGCATTTAGTGAACCTCTGCATTTTGTGTATTT  576

seq1  ATTTACCATTTTATTATGTCATTATTCTCTTATTTTCTTCTGGGTTTATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCATTTTATTATGTCATTATTCTCTTATTTTCTTCTGGGTTTATA  626

seq1  CTGTAGGCACCTTGATGATAGAGTTTATAGTTATGCTTTCGATTCCTACT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGCACCTTGATGATAGAGTTTATAGTTATGCTTTCGATTCCTACT  676

seq1  TGCTGGAGGGATATACTCATTTCTGAGAACTTGGCACATGCATAGGCTAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGGGATATACTCATTTCTGAGAACTTGGCACATGCATAGGCTAT  726

seq1  GTTTGTGAAACACAGGCAAAGGGATACACACATATTCAAGTTCATCTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGAAACACAGGCAAAGGGATACACACATATTCAAGTTCATCTTTT  776

seq1  CATACTCTTGCTTCTTGTGATCCTAGTTTGGTTTCAGATCTTGTGATTGC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCTTGCTTCTTGTGATCCTAGTTTGGTTTCAGATCTTGTGATTGC  826

seq1  AAATGTCATGCTAAAGCTCTCTATATTACCAAGTATTCTGAGATCTATTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCATGCTAAAGCTCTCTATATTACCAAGTATTCTGAGATCTATTC  876

seq1  TTAAAGCCAAAGCTATCTGTAGTAACATATCATATCCATAAGTGTTAATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGCCAAAGCTATCTGTAGTAACATATCATATCCATAAGTGTTAATA  926

seq1  CATCCTTGCATATCTCCATGCATCTGCTTGTACCTATTTTATTAAAGTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGCATATCTCCATGCATCTGCTTGTACCTATTTTATTAAAGTGA  976

seq1  GTCATTCTTAAAACACCCAAAGTTTAGTAAGGGTACAGTATTTATGTAGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTTAAAACACCCAAAGTTTAGTAAGGGTACAGTATTTATGTAGT  1026

seq1  CTTTTCATTCATGTGAGAAGAATTCACTAGGTATCTACTAATGACTGAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATTCATGTGAGAAGAATTCACTAGGTATCTACTAATGACTGAAA  1076

seq1  TTACCCCAAGGGCTTTGAACACATCAGTGAACAAGAACCCTTAAGTTACC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCAAGGGCTTTGAACACATCAGTGAACAAGAACCCTTAAGTTACC  1126

seq1  ATACACATAGTTTTTGAATTC  1168
      |||||||||||||||||||||
seq2  ATACACATAGTTTTTGAATTC  1147


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