BAC Information

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BAC

Clone NameB6Ng01-067O22
Chromosome12 (Build37)
Map Location 16,005,269 - 16,179,287
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042426, LOC217409, Trib2, LOC100043268, EG432636, LOC100043273
Downstream geneLpin1, Ntsr2, Greb1, E2f6, Rock2, Pqlc3, 2410004P03Rik, EG668514, Kcnf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067O22.bB6Ng01-067O22.g
ACCDH886668DH886669
length1,096275
definitionDH886668|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O22, 5' end.DH886669|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,178,179 - 16,179,287)(16,005,269 - 16,005,543)
sequence
gaattcttcacatgcaaacttcctctttagttattatgtatacgctcagc
actggagagtatgttccatacaaagaaaacacagccctggagtgaaataa
cagaggcatgtgtgagaccatctggagaagctgtgttcatctcaagttaa
tgtgatgtgtctgttaaacctctttgttgcagtttatttaccaaaggcaa
ggtctgaatttcctttatttttgacttcagtcctcataacaatgcccatg
gtattttgacactctgtggatatctgttgaataaatgagaagctgccatt
ataccaagattttttggtagaaaatgtacaattgatgaaatagctttaaa
aaaaaagaagagggaagccttaatggatttctccttgtttgcctatgtct
ttctgaaatagtttaaaatgagctttgcaaagcgtcatcagtggggacgg
agagtgagaagctgtcagggagctgggaggttgttttgttatctacagaa
ctgactacagcccatgagacgccactgtagatgtcgggcttgagaaaggc
aggcagattgagaaaagctttagaaaaaagaaggaatgacccaaatgtgc
gtaattgaatcttcattgaggtctaaggtatccaggaaacactgtttttt
ttctttgaacctgaaattcaaagtgaaacttagggtaaacatgagtcact
gggcgatatgaactcaggcagttcccacagcttttgggatctagaagtta
caaaacatcttgacctgctgaactctgatgtgataaaagacccagggatg
gaatggctgtgaaatcatgaggttgtgcagggtatataagtttacacacc
tgttaacctattccagaaaaaggttggcttgggccttgcttttacatggg
cactgcacatgtaattaggagtgtgaagcagtctccatagagggggggaa
aacaaaaataaatggcttgtacagagagtgctgtgctagtgcaacatagg
tggtacagaatcatatggtgagaagcagagatgcctgagctatatcagag
gtatgaggaagtggaaaacccagccagaaaggatctgacagaggac
tttctcagaatctctctggtgcaacagcaggaagtactttcaagtgatgg
aaaaaaagagttttctaaagaaatgacacaattttctataagagacagtt
tccctttgaagtcaatttgttttgactcacctgtgagctacaaccatgag
aacttccaatctgcactcagagagcctccttctacaatttattagccata
aaatgtagatcagacttgtaagccttaaatttttaattctttctttgttt
attgtgggggtgatggaggaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_16178179_16179287
seq2: B6Ng01-067O22.b_44_1139 (reverse)

seq1  GTCCTCTGTCTGGGAATCCTTTCTGGCTTGTGTCTTCCCACCTTCCTCAT  50
      |||||||||| |   |||||||||||| || || ||||   |||||||||
seq2  GTCCTCTGTCAG---ATCCTTTCTGGC-TGGGTTTTCC--ACTTCCTCAT  44

seq1  ACTTCTTGAATATAGCTCAGGCATCTCTGCTTCTTCACATATGATTCTTG  100
      || |||   |||||||||||||||||||||||||   |||||||||| ||
seq2  ACCTCT--GATATAGCTCAGGCATCTCTGCTTCTCACCATATGATTC-TG  91

seq1  TACCACCTATGTTTGCACTTAGCACAGCACTCTCCTGTTACAAGCCATTT  150
      ||||||||||| |||||| |||||||||||||| ||| ||||||||||||
seq2  TACCACCTATG-TTGCAC-TAGCACAGCACTCT-CTG-TACAAGCCATTT  137

seq1  ATTTTTGTTTTCCCCCCCTCTATGGAGACTGCTTCACACTCCTAATTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTTTCCCCCCCTCTATGGAGACTGCTTCACACTCCTAATTACA  187

seq1  TGTGCAGTGCCCATGTAAAAGCAAGGCCCAAGCCAACCTTTTTCTGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGTGCCCATGTAAAAGCAAGGCCCAAGCCAACCTTTTTCTGGAAT  237

seq1  AGGTTAACAGGTGTGTAAACTTATATACCCTGCACAACCTCATGATTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAACAGGTGTGTAAACTTATATACCCTGCACAACCTCATGATTTCA  287

seq1  CAGCCATTCCATCCCTGGGTCTTTTATCACATCAGAGTTCAGCAGGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATTCCATCCCTGGGTCTTTTATCACATCAGAGTTCAGCAGGTCAA  337

seq1  GATGTTTTGTAACTTCTAGATCCCAAAAGCTGTGGGAACTGCCTGAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTGTAACTTCTAGATCCCAAAAGCTGTGGGAACTGCCTGAGTTC  387

seq1  ATATCGCCCAGTGACTCATGTTTACCCTAAGTTTCACTTTGAATTTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGCCCAGTGACTCATGTTTACCCTAAGTTTCACTTTGAATTTCAGG  437

seq1  TTCAAAGAAAAAAAACAGTGTTTCCTGGATACCTTAGACCTCAATGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGAAAAAAAACAGTGTTTCCTGGATACCTTAGACCTCAATGAAGA  487

seq1  TTCAATTACGCACATTTGGGTCATTCCTTCTTTTTTCTAAAGCTTTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTACGCACATTTGGGTCATTCCTTCTTTTTTCTAAAGCTTTTCTC  537

seq1  AATCTGCCTGCCTTTCTCAAGCCCGACATCTACAGTGGCGTCTCATGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCCTGCCTTTCTCAAGCCCGACATCTACAGTGGCGTCTCATGGGC  587

seq1  TGTAGTCAGTTCTGTAGATAACAAAACAACCTCCCAGCTCCCTGACAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCAGTTCTGTAGATAACAAAACAACCTCCCAGCTCCCTGACAGCT  637

seq1  TCTCACTCTCCGTCCCCACTGATGACGCTTTGCAAAGCTCATTTTAAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCTCCGTCCCCACTGATGACGCTTTGCAAAGCTCATTTTAAACT  687

seq1  ATTTCAGAAAGACATAGGCAAACAAGGAGAAATCCATTAAGGCTTCCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAAAGACATAGGCAAACAAGGAGAAATCCATTAAGGCTTCCCTC  737

seq1  TTCTTTTTTTTTAAAGCTATTTCATCAATTGTACATTTTCTACCAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTAAAGCTATTTCATCAATTGTACATTTTCTACCAAAAAA  787

seq1  TCTTGGTATAATGGCAGCTTCTCATTTATTCAACAGATATCCACAGAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTATAATGGCAGCTTCTCATTTATTCAACAGATATCCACAGAGTG  837

seq1  TCAAAATACCATGGGCATTGTTATGAGGACTGAAGTCAAAAATAAAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATACCATGGGCATTGTTATGAGGACTGAAGTCAAAAATAAAGGAA  887

seq1  ATTCAGACCTTGCCTTTGGTAAATAAACTGCAACAAAGAGGTTTAACAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGACCTTGCCTTTGGTAAATAAACTGCAACAAAGAGGTTTAACAGA  937

seq1  CACATCACATTAACTTGAGATGAACACAGCTTCTCCAGATGGTCTCACAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACATTAACTTGAGATGAACACAGCTTCTCCAGATGGTCTCACAC  987

seq1  ATGCCTCTGTTATTTCACTCCAGGGCTGTGTTTTCTTTGTATGGAACATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTGTTATTTCACTCCAGGGCTGTGTTTTCTTTGTATGGAACATA  1037

seq1  CTCTCCAGTGCTGAGCGTATACATAATAACTAAAGAGGAAGTTTGCATGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTGCTGAGCGTATACATAATAACTAAAGAGGAAGTTTGCATGT  1087

seq1  GAAGAATTC  1109
      |||||||||
seq2  GAAGAATTC  1096

seq1: chr12_16005269_16005543
seq2: B6Ng01-067O22.g_72_346

seq1  TTTCTCAGAATCTCTCTGGTGCAACAGCAGGAAGTACTTTCAAGTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGAATCTCTCTGGTGCAACAGCAGGAAGTACTTTCAAGTGATGG  50

seq1  AAAAAAAGAGTTTTCTAAAGAAATGACACAATTTTCTATAAGAGACAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGAGTTTTCTAAAGAAATGACACAATTTTCTATAAGAGACAGTT  100

seq1  TCCCTTTGAAGTCAATTTGTTTTGACTCACCTGTGAGCTACAACCATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGAAGTCAATTTGTTTTGACTCACCTGTGAGCTACAACCATGAG  150

seq1  AACTTCCAATCTGCACTCAGAGAGCCTCCTTCTACAATTTATTAGCCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCAATCTGCACTCAGAGAGCCTCCTTCTACAATTTATTAGCCATA  200

seq1  AAATGTAGATCAGACTTGTAAGCCTTAAATTTTTAATTCTTTCTTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGATCAGACTTGTAAGCCTTAAATTTTTAATTCTTTCTTTGTTT  250

seq1  ATTGTGGGGGTGATGGAGGAGGAGA  275
      |||||||||||||||||||||||||
seq2  ATTGTGGGGGTGATGGAGGAGGAGA  275